; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g23630 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g23630
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:16849220..16862675
RNA-Seq ExpressionMoc05g23630
SyntenyMoc05g23630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]2.2e-0969.77Show/hide
Query:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK
        + LQPP PKWYDP+V+C+Y+AG VGHSTENC  LK KVQ L+K
Subjt:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK

XP_022764231.1 uncharacterized protein LOC111309436 [Durio zibethinus]1.3e-0956.6Show/hide
Query:  INTTCQSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMKEIALS
        + T  +SL+PP P WYDP+V+CDY+ G  GHSTENC + KHKVQ L+ +  LS
Subjt:  INTTCQSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMKEIALS

XP_031737539.1 uncharacterized protein LOC116402431 [Cucumis sativus]2.2e-0972.5Show/hide
Query:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM
        +QPP PKWYDP+ RCDY+AG VGHSTENC++LK KVQ L+
Subjt:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]2.2e-0972.5Show/hide
Query:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM
        +QPP PKWYDP+ RCDY+AG VGHSTENC++LK KVQ L+
Subjt:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM

XP_031741698.1 uncharacterized protein LOC116403895 [Cucumis sativus]2.2e-0972.5Show/hide
Query:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM
        +QPP PKWYDP+ RCDY+AG VGHSTENC++LK KVQ L+
Subjt:  LQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLM

TrEMBL top hitse value%identityAlignment
A0A5A7SLF7 Uncharacterized protein1.1e-0969.77Show/hide
Query:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK
        + LQPP PKWYDP+ +C+Y+AGAVGHSTENC  LK KVQ L+K
Subjt:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK

A0A5A7SUT0 Reverse transcriptase1.1e-0969.77Show/hide
Query:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK
        + LQPP PKWYDP+ +C+Y+AGAVGHSTENC  LK KVQ L+K
Subjt:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK

A0A5A7ULI2 Retrotrans_gag domain-containing protein1.1e-0969.77Show/hide
Query:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK
        + LQPP PKWYDP+V+C+Y+AG VGHSTENC  LK KVQ L+K
Subjt:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK

A0A5A7VAU5 Uncharacterized protein1.1e-0969.77Show/hide
Query:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK
        + LQPP PKWYDP+ +C+Y+AGAVGHSTENC  LK KVQ L+K
Subjt:  QSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMK

A0A6P6AHE7 uncharacterized protein LOC1113094366.3e-1056.6Show/hide
Query:  INTTCQSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMKEIALS
        + T  +SL+PP P WYDP+V+CDY+ G  GHSTENC + KHKVQ L+ +  LS
Subjt:  INTTCQSLQPPNPKWYDPHVRCDYYAGAVGHSTENCISLKHKVQVLMKEIALS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTATTGTAGCGCGAAAAGGAATTGGCCTCTGGCCTTGCATGCGGCTTTCAAGCATACCAAAAGGGATGGAAACGAAGCGGCAAATTTGTTGGCGAGGCGTGCTCT
CTTTCAACGGGAGTCTTCGATTATGCTGAAGGATGGCCCAGTGGAGCTTCTTTACCAAGTGGAAGTGGATTGTCTACGCATGAAATTATCCACTCAAGTCGACCATATTG
CCAAAGCATATGGAAGATTTGGGGGTCTTTATCCTCTAGGATGCATTAATACTACCTGTCAGTCATTACAACCACCTAATCCAAAGTGGTACGACCCACATGTTCGTTGT
GATTACTATGCAGGAGCTGTAGGTCATTCAACTGAGAACTGTATTTCACTGAAGCACAAAGTGCAAGTTCTAATGAAGGAAATTGCATTATCTGTTGGATTCACACATGA
CACATCCTTATTGGAAAAGAAAAGCACGCATGACTTTAAGTCTGTGAAGCCAAGTTTTATCACCTCGGTATTTCGACTGTCTACCGAGCCGATGCCAGTTATGGCCAAGC
CGACGCCCGTTATGGCTGAGCCGACCAAGATCTCCTTTGGTTCCATTCTCGTTCTTTCCGTTGAGGCCCTGTTGGGTGTCGGAGACCTTGCCTATATACAGAAATCATTT
GCCTCTATCCCAGGTTTTTTGCTCAGCACGTTTCAGCTCATCCTCAAGGTCATCCTTCCGTCTGAGCAGAATTCGCAAGCTTGGTCATTTTTGTTAAATCAAACTCAATC
TAAGTTAAGGTCAAAGCCTGGGTTAAAGCAGTTAAATCAAACCCGATCCAAGATCAAGGTCGAAGCCTGTGTTAAAGCTAGGTCTGTTGTATTTTATCATTCGGTTAAAT
CGAACTCGATCCAAGTCGAGGTTGAAGCCTGTGTTAAAGACAGGTCCATTTCATTTTATCTTTCGGTTAAATCGAACTCGATCCACGTCGAGGTCGAAGCCTATGTTAAA
GCTAGGTCCGTTGCATTTTTATCTTATCTACGGTTAAATCGAACCCGGTCCAAGATCAAGGTTGAAGCCTGTGTTAAAGCCAAGTCCGTTGTATTTTATCATTCGGTTAA
ATCGAACTCAGTCCAAGTCGAGGTCGAAGCCTGTTTAAAGTCAGGTCCATTGCATTATATCTTTCGGTTAAATCGAACCAGACCCAAGTCGAGGTCGAAGCTGGTGTTAA
AGCTAGTTGTTGCTGCTGATCCTGGAACATCCATTGTTGCTGTCATTGGTACTGACAAATTTGAGAAAGACAACAAGGCGGTCCGTGGGCATCTTCTCAAACGCGAATGT
GATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTATTGTAGCGCGAAAAGGAATTGGCCTCTGGCCTTGCATGCGGCTTTCAAGCATACCAAAAGGGATGGAAACGAAGCGGCAAATTTGTTGGCGAGGCGTGCTCT
CTTTCAACGGGAGTCTTCGATTATGCTGAAGGATGGCCCAGTGGAGCTTCTTTACCAAGTGGAAGTGGATTGTCTACGCATGAAATTATCCACTCAAGTCGACCATATTG
CCAAAGCATATGGAAGATTTGGGGGTCTTTATCCTCTAGGATGCATTAATACTACCTGTCAGTCATTACAACCACCTAATCCAAAGTGGTACGACCCACATGTTCGTTGT
GATTACTATGCAGGAGCTGTAGGTCATTCAACTGAGAACTGTATTTCACTGAAGCACAAAGTGCAAGTTCTAATGAAGGAAATTGCATTATCTGTTGGATTCACACATGA
CACATCCTTATTGGAAAAGAAAAGCACGCATGACTTTAAGTCTGTGAAGCCAAGTTTTATCACCTCGGTATTTCGACTGTCTACCGAGCCGATGCCAGTTATGGCCAAGC
CGACGCCCGTTATGGCTGAGCCGACCAAGATCTCCTTTGGTTCCATTCTCGTTCTTTCCGTTGAGGCCCTGTTGGGTGTCGGAGACCTTGCCTATATACAGAAATCATTT
GCCTCTATCCCAGGTTTTTTGCTCAGCACGTTTCAGCTCATCCTCAAGGTCATCCTTCCGTCTGAGCAGAATTCGCAAGCTTGGTCATTTTTGTTAAATCAAACTCAATC
TAAGTTAAGGTCAAAGCCTGGGTTAAAGCAGTTAAATCAAACCCGATCCAAGATCAAGGTCGAAGCCTGTGTTAAAGCTAGGTCTGTTGTATTTTATCATTCGGTTAAAT
CGAACTCGATCCAAGTCGAGGTTGAAGCCTGTGTTAAAGACAGGTCCATTTCATTTTATCTTTCGGTTAAATCGAACTCGATCCACGTCGAGGTCGAAGCCTATGTTAAA
GCTAGGTCCGTTGCATTTTTATCTTATCTACGGTTAAATCGAACCCGGTCCAAGATCAAGGTTGAAGCCTGTGTTAAAGCCAAGTCCGTTGTATTTTATCATTCGGTTAA
ATCGAACTCAGTCCAAGTCGAGGTCGAAGCCTGTTTAAAGTCAGGTCCATTGCATTATATCTTTCGGTTAAATCGAACCAGACCCAAGTCGAGGTCGAAGCTGGTGTTAA
AGCTAGTTGTTGCTGCTGATCCTGGAACATCCATTGTTGCTGTCATTGGTACTGACAAATTTGAGAAAGACAACAAGGCGGTCCGTGGGCATCTTCTCAAACGCGAATGT
GATGTTTGA
Protein sequenceShow/hide protein sequence
MGYCSAKRNWPLALHAAFKHTKRDGNEAANLLARRALFQRESSIMLKDGPVELLYQVEVDCLRMKLSTQVDHIAKAYGRFGGLYPLGCINTTCQSLQPPNPKWYDPHVRC
DYYAGAVGHSTENCISLKHKVQVLMKEIALSVGFTHDTSLLEKKSTHDFKSVKPSFITSVFRLSTEPMPVMAKPTPVMAEPTKISFGSILVLSVEALLGVGDLAYIQKSF
ASIPGFLLSTFQLILKVILPSEQNSQAWSFLLNQTQSKLRSKPGLKQLNQTRSKIKVEACVKARSVVFYHSVKSNSIQVEVEACVKDRSISFYLSVKSNSIHVEVEAYVK
ARSVAFLSYLRLNRTRSKIKVEACVKAKSVVFYHSVKSNSVQVEVEACLKSGPLHYIFRLNRTRPKSRSKLVLKLVVAADPGTSIVAVIGTDKFEKDNKAVRGHLLKREC
DV