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Moc05g23700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g23700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:16928341..16929114
RNA-Seq ExpressionMoc05g23700
SyntenyMoc05g23700
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]6.6e-3287.8Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENYKQWKSNLNTILVIDDL+FVLQEDCPQA  PNATV V  AYDRWIKANDKAKVYILASI DV A+KHEDTITAKEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]6.4e-2772.29Show/hide
Query:  SENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        SENY QWK+NLNTILV+DDLRF+L E+CPQAPTPNA     +AYDRWIKANDKA VYIL SI DV ++KHE  +TA+EIMD L
Subjt:  SENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]1.4e-2980.49Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENYKQWKSN+NTIL+IDDLRFVLQEDCPQAP PNATV V N YDRWIKANDKAKV ILASI DV A+KHE+++  KEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]5.0e-3285.37Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENY+QWKSNLNTILVIDDLRFVLQEDCPQAP  NATV V NAYDRWIK+NDKAKVYILASI DV A+KHEDT+T KEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

XP_038882358.1 uncharacterized protein LOC120073622 [Benincasa hispida]4.6e-2569.51Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        +NY  WKSNLNTILV+DDLRFVL E+CPQAPT NA   V  AYDRW+KAN+KA++YILAS+ DV A+KHE   TAKEI+D L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

TrEMBL top hitse value%identityAlignment
A0A6J1DFZ2 uncharacterized protein LOC1110200953.2e-3287.8Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENYKQWKSNLNTILVIDDL+FVLQEDCPQA  PNATV V  AYDRWIKANDKAKVYILASI DV A+KHEDTITAKEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

A0A6J1DVX8 uncharacterized protein LOC1110235914.9e-2569.51Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        +NY QWK+NLNTILV+DDLRFVL E CPQAPT NA     +AYDRWIKANDKAK+YILA+I +V A+KH+  +TA+EIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

A0A6J1DW68 uncharacterized protein LOC1110246376.6e-3080.49Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENYKQWKSN+NTIL+IDDLRFVLQEDCPQAP PNATV V N YDRWIKANDKAKV ILASI DV A+KHE+++  KEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

A0A6J1DWI4 uncharacterized protein LOC1110241453.1e-2772.29Show/hide
Query:  SENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        SENY QWK+NLNTILV+DDLRF+L E+CPQAPTPNA     +AYDRWIKANDKA VYIL SI DV ++KHE  +TA+EIMD L
Subjt:  SENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

A0A6J1DWL0 uncharacterized protein LOC1110247342.4e-3285.37Show/hide
Query:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL
        ENY+QWKSNLNTILVIDDLRFVLQEDCPQAP  NATV V NAYDRWIK+NDKAKVYILASI DV A+KHEDT+T KEIMD L
Subjt:  ENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKANDKAKVYILASIFDVFAEKHEDTITAKEIMDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATAGTATTCATAGTAACTGGGATTTCATTCATGGCCTACGGTGCGATCATCCCTACGGAGGGTCCATTGTATGGAATTGAAACAAGGCAAACTCCAGAAATGGA
TATGGAATTTTTAGGTTTTGCTCCAAAATCTTGCTTCCCTACGGCGAGATTATTACAGCGGACCTCTGAGAACTACAAACAATGGAAATCGAACCTAAACACTATACTAG
TGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGCTCCTACGCCTAACGCCACTGTGGTGGTGCACAACGCCTATGACCGGTGGATCAAGGCCAATGAT
AAGGCCAAAGTCTACATCTTGGCGAGCATATTTGATGTGTTTGCTGAGAAGCACGAGGACACAATCACCGCTAAGGAGATCATGGACTTGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATAGTATTCATAGTAACTGGGATTTCATTCATGGCCTACGGTGCGATCATCCCTACGGAGGGTCCATTGTATGGAATTGAAACAAGGCAAACTCCAGAAATGGA
TATGGAATTTTTAGGTTTTGCTCCAAAATCTTGCTTCCCTACGGCGAGATTATTACAGCGGACCTCTGAGAACTACAAACAATGGAAATCGAACCTAAACACTATACTAG
TGATAGATGATCTTAGGTTCGTCTTGCAAGAGGATTGTCCTCAAGCTCCTACGCCTAACGCCACTGTGGTGGTGCACAACGCCTATGACCGGTGGATCAAGGCCAATGAT
AAGGCCAAAGTCTACATCTTGGCGAGCATATTTGATGTGTTTGCTGAGAAGCACGAGGACACAATCACCGCTAAGGAGATCATGGACTTGCTATAG
Protein sequenceShow/hide protein sequence
MEIVFIVTGISFMAYGAIIPTEGPLYGIETRQTPEMDMEFLGFAPKSCFPTARLLQRTSENYKQWKSNLNTILVIDDLRFVLQEDCPQAPTPNATVVVHNAYDRWIKAND
KAKVYILASIFDVFAEKHEDTITAKEIMDLL