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Moc05g23930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g23930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:17055392..17057015
RNA-Seq ExpressionMoc05g23930
SyntenyMoc05g23930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038145.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.6e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKS+KSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

TYK20461.1 Gag-pro-like protein [Cucumis melo var. makuwa]4.6e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKS+KSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]4.6e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKST+SFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]1.6e-0484.85Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKSTKSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]4.6e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKST+SFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

TrEMBL top hitse value%identityAlignment
A0A2N9HJ15 Uncharacterized protein1.0e-0453.97Show/hide
Query:  DEAHTLTSTIAPTQPNYKSTLKFLGKLHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAALSIP
        D+AHT +  I P+ PN  ST K      +A DR DLQ MEKKS ++F+EYAQRWR+KAA + P
Subjt:  DEAHTLTSTIAPTQPNYKSTLKFLGKLHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAALSIP

A0A5A7T9N7 Gag-pro-like protein2.2e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKS+KSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

A0A5D3DA56 Gag-pro-like protein2.2e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKS+KSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

A0A6J1D099 Ribonuclease H7.7e-0584.85Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKSTKSFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

A0A6J1E2J7 Ribonuclease H2.2e-0481.82Show/hide
Query:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA
        + MA DRLDLQ MEKKST+SFKEYAQRWRD AA
Subjt:  LHMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCTAGGAAAATCAAATATTGAGGATGTCCAGCTGCTTAAGAGTCATCTTGGTAAAACTCAGAATGCTACTGATGGGATAATGCAGGACTACACTTATATC
AAAGAACAAATACAACCAAATGGGAATGAATTGGATCATGTGAAACATAATAATACGATGTCACGTCGTAATTCAGAAAATGTGCTCACCCAAGTTAGACAGGCA
GCTCAAAGGACATATGATTTAGCCGATGAGGCACACACTCTCACGTCCACAATTGCCCCTACACAACCGAATTACAAGAGCACGCTCAAGTTCCTTGGCAAACTT
CATATGGCTTATGATCGTTTGGATTTACAGATGATGGAAAAGAAAAGTACGAAAAGCTTTAAGGAGTACGCTCAAAGGTGGAGGGATAAGGCAGCTCTGAGCATA
CCGTACCGCATAGGGACCCCCGTGGTGCAACCTCCGACACATGGACCGAGGCGCAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTCGAGTTTTCTATCCTC
GACGAAAGTCGCCCAAGACACTCGTCTTGTAGACGCTCGCCCTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCTAGGAAAATCAAATATTGAGGATGTCCAGCTGCTTAAGAGTCATCTTGGTAAAACTCAGAATGCTACTGATGGGATAATGCAGGACTACACTTATATC
AAAGAACAAATACAACCAAATGGGAATGAATTGGATCATGTGAAACATAATAATACGATGTCACGTCGTAATTCAGAAAATGTGCTCACCCAAGTTAGACAGGCA
GCTCAAAGGACATATGATTTAGCCGATGAGGCACACACTCTCACGTCCACAATTGCCCCTACACAACCGAATTACAAGAGCACGCTCAAGTTCCTTGGCAAACTT
CATATGGCTTATGATCGTTTGGATTTACAGATGATGGAAAAGAAAAGTACGAAAAGCTTTAAGGAGTACGCTCAAAGGTGGAGGGATAAGGCAGCTCTGAGCATA
CCGTACCGCATAGGGACCCCCGTGGTGCAACCTCCGACACATGGACCGAGGCGCAATGTCGGCACACCCGTGCCGCCCGACACTGTCCTCGAGTTTTCTATCCTC
GACGAAAGTCGCCCAAGACACTCGTCTTGTAGACGCTCGCCCTCGCCATGA
Protein sequenceShow/hide protein sequence
MCLGKSNIEDVQLLKSHLGKTQNATDGIMQDYTYIKEQIQPNGNELDHVKHNNTMSRRNSENVLTQVRQAAQRTYDLADEAHTLTSTIAPTQPNYKSTLKFLGKL
HMAYDRLDLQMMEKKSTKSFKEYAQRWRDKAALSIPYRIGTPVVQPPTHGPRRNVGTPVPPDTVLEFSILDESRPRHSSCRRSPSP