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Moc05g24280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g24280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationchr5:17272284..17280073
RNA-Seq ExpressionMoc05g24280
SyntenyMoc05g24280
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149401.1 uncharacterized protein LOC111017826 [Momordica charantia]9.2e-0875Show/hide
Query:  FNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEI
        F  RSELEY E ELLVDNDDPPT EV+NEVWKNK+VE E+P+E+
Subjt:  FNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEI

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]5.2e-2741.23Show/hide
Query:  DDVEQQKITSKIAKILVVLNEAMREDLLEDDGKQDDEEPPAQEQEGTFGPVDVSKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLTAQK
        D+ E ++    I++  V +   + E       +Q DEEPP +EQEGT GPVDV     EE S              +  + GA+SRPRTR A+ARL AQK
Subjt:  DDVEQQKITSKIAKILVVLNEAMREDLLEDDGKQDDEEPPAQEQEGTFGPVDVSKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLTAQK

Query:  KS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEALVK
        ++                                               RP FT  +ILLERGFDEA+E +PEYV++R+VENGWE+LFAP T VSEALVK
Subjt:  KS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEALVK

Query:  EFYAAINPNRG
        EFY AINPNRG
Subjt:  EFYAAINPNRG

XP_022156786.1 uncharacterized protein LOC111023620 [Momordica charantia]2.4e-2440.65Show/hide
Query:  DGKQDDEEPPAQEQEGTFGPVDV---------------------------------SKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLT
        + +QDDEE   QEQEG  G VDV                                 + T +E+V LT+VVKK + K  + EI  GA SRP TRA IA L 
Subjt:  DGKQDDEEPPAQEQEGTFGPVDV---------------------------------SKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLT

Query:  AQKKS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEA
        AQK++                                               R NFTA EIL+E+GFDEA+E +P+Y+KRRL+ENGWE+LFAPT  VSE 
Subjt:  AQKKS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEA

Query:  LVKEFYAAINPNRG
        LVKEFYA INPNRG
Subjt:  LVKEFYAAINPNRG

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]5.2e-1942.72Show/hide
Query:  KNKEVEHEKPVEIERGESSPNFKDQVEEEIREDEIGQEQVSGDSERDMEPLEHSDLATVKIQCQIAPGAIWDKTPPATLQGILSPSFPYAILTKKPLVFD
        K+ EV+  K   IE+     N  + +   +R       +VSGDSE DMEPLEHSD ATVKI+CQIAP  I  +TPPATLQ                    
Subjt:  KNKEVEHEKPVEIERGESSPNFKDQVEEEIREDEIGQEQVSGDSERDMEPLEHSDLATVKIQCQIAPGAIWDKTPPATLQGILSPSFPYAILTKKPLVFD

Query:  DVEQQKITSKIAKILVVLNEAMREDLLEDDGK--QDDEEPPAQEQEGTFGPVDV--------------SKT-------------------LDEEVSLTEV
                    ++LV LNEA  ED L+DDG   QDDEEP AQEQEGT GP+DV              SKT                    DEEV+L +V
Subjt:  DVEQQKITSKIAKILVVLNEAMREDLLEDDGK--QDDEEPPAQEQEGTFGPVDV--------------SKT-------------------LDEEVSLTEV

Query:  VKKTQKKIKVAEI
        VKKTQKK KVAEI
Subjt:  VKKTQKKIKVAEI

XP_022157694.1 uncharacterized protein LOC111024352 [Momordica charantia]2.1e-0743.27Show/hide
Query:  QETSEAFNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEIERGESS----------------PNFKDQVEEEIREDEIG---QEQVSGDS
        +E  EAFNERSELE  E EL +DNDDPP  EVINEVWKNKEVE EKP+E+   E +                P    ++ + I+++E+    ++QV+G+ 
Subjt:  QETSEAFNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEIERGESS----------------PNFKDQVEEEIREDEIG---QEQVSGDS

Query:  ERDM
          D+
Subjt:  ERDM

TrEMBL top hitse value%identityAlignment
A0A6J1D894 uncharacterized protein LOC1110178264.5e-0875Show/hide
Query:  FNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEI
        F  RSELEY E ELLVDNDDPPT EV+NEVWKNK+VE E+P+E+
Subjt:  FNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEI

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220072.5e-2741.23Show/hide
Query:  DDVEQQKITSKIAKILVVLNEAMREDLLEDDGKQDDEEPPAQEQEGTFGPVDVSKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLTAQK
        D+ E ++    I++  V +   + E       +Q DEEPP +EQEGT GPVDV     EE S              +  + GA+SRPRTR A+ARL AQK
Subjt:  DDVEQQKITSKIAKILVVLNEAMREDLLEDDGKQDDEEPPAQEQEGTFGPVDVSKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLTAQK

Query:  KS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEALVK
        ++                                               RP FT  +ILLERGFDEA+E +PEYV++R+VENGWE+LFAP T VSEALVK
Subjt:  KS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEALVK

Query:  EFYAAINPNRG
        EFY AINPNRG
Subjt:  EFYAAINPNRG

A0A6J1DRR9 uncharacterized protein LOC1110237612.5e-1942.72Show/hide
Query:  KNKEVEHEKPVEIERGESSPNFKDQVEEEIREDEIGQEQVSGDSERDMEPLEHSDLATVKIQCQIAPGAIWDKTPPATLQGILSPSFPYAILTKKPLVFD
        K+ EV+  K   IE+     N  + +   +R       +VSGDSE DMEPLEHSD ATVKI+CQIAP  I  +TPPATLQ                    
Subjt:  KNKEVEHEKPVEIERGESSPNFKDQVEEEIREDEIGQEQVSGDSERDMEPLEHSDLATVKIQCQIAPGAIWDKTPPATLQGILSPSFPYAILTKKPLVFD

Query:  DVEQQKITSKIAKILVVLNEAMREDLLEDDGK--QDDEEPPAQEQEGTFGPVDV--------------SKT-------------------LDEEVSLTEV
                    ++LV LNEA  ED L+DDG   QDDEEP AQEQEGT GP+DV              SKT                    DEEV+L +V
Subjt:  DVEQQKITSKIAKILVVLNEAMREDLLEDDGK--QDDEEPPAQEQEGTFGPVDV--------------SKT-------------------LDEEVSLTEV

Query:  VKKTQKKIKVAEI
        VKKTQKK KVAEI
Subjt:  VKKTQKKIKVAEI

A0A6J1DW11 uncharacterized protein LOC1110236201.2e-2440.65Show/hide
Query:  DGKQDDEEPPAQEQEGTFGPVDV---------------------------------SKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLT
        + +QDDEE   QEQEG  G VDV                                 + T +E+V LT+VVKK + K  + EI  GA SRP TRA IA L 
Subjt:  DGKQDDEEPPAQEQEGTFGPVDV---------------------------------SKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLT

Query:  AQKKS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEA
        AQK++                                               R NFTA EIL+E+GFDEA+E +P+Y+KRRL+ENGWE+LFAPT  VSE 
Subjt:  AQKKS-----------------------------------------------RPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVSEA

Query:  LVKEFYAAINPNRG
        LVKEFYA INPNRG
Subjt:  LVKEFYAAINPNRG

A0A6J1DXA5 uncharacterized protein LOC1110243529.9e-0843.27Show/hide
Query:  QETSEAFNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEIERGESS----------------PNFKDQVEEEIREDEIG---QEQVSGDS
        +E  EAFNERSELE  E EL +DNDDPP  EVINEVWKNKEVE EKP+E+   E +                P    ++ + I+++E+    ++QV+G+ 
Subjt:  QETSEAFNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEIERGESS----------------PNFKDQVEEEIREDEIG---QEQVSGDS

Query:  ERDM
          D+
Subjt:  ERDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCAAGGATCGAGCTAGGCGATCGACGTGTAAACCATGATAACTCAACCTCGCCAAGAGGAAGAGCTCCATCTCAGTCTTTTCTTAAGGCCGACCTGAAG
GTCTTCCTTAGAGATTATTCAAGGGAGGAACGACCTCCCATACTTAGCCAAATTCCATATGACAATAGTATGAACTGGAATAGCTACTCCCGACAGGCATGCTCA
ACCACAGGTCTTTCCTCCCCAAGTGGCTTTCAGCTCTGCCTGACACTTCAGCTCATCCCAATCAGTCGCCTTGACCCTTTGAGTTGGTCATCCCTTTCCAAAGAT
ACCCAAGCTCTTCCCACGGTCATACCGCTCTCCCATCGATCATACCTAGAGCAGGTCGAGCTCTTCCGCGTTGCCGACCTTGACCAGGTCCACCAGGAAACCAGT
GAGGCATTCAATGAAAGAAGCGAGCTTGAATATGGCGAATCTGAGCTCCTAGTGGACAACGATGATCCACCAACCTTTGAAGTGATAAATGAGGTATGGAAGAAT
AAGGAAGTTGAACATGAGAAACCGGTAGAGATAGAAAGAGGGGAGAGCTCACCAAATTTCAAAGATCAAGTAGAGGAAGAAATAAGAGAAGATGAGATAGGTCAA
GAACAGGTTAGTGGAGACTCAGAACGCGACATGGAGCCCTTGGAGCATTCAGATTTGGCCACGGTCAAAATTCAGTGCCAAATTGCGCCTGGCGCAATTTGGGAT
AAGACTCCACCGGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCCATATGCTATCTTGACTAAAAAGCCCCTAGTTTTTGATGATGTAGAACAGCAAAAGATA
ACGTCGAAAATTGCCAAAATTTTGGTGGTGTTAAATGAAGCAATGAGAGAGGATCTATTGGAGGATGATGGAAAACAAGATGATGAGGAGCCCCCTGCACAAGAG
CAAGAAGGAACATTCGGTCCTGTGGATGTCTCTAAGACTTTAGATGAGGAGGTGAGCTTGACCGAAGTGGTGAAGAAAACACAAAAGAAGATAAAAGTGGCAGAA
ATTGCGCTTGGCGCAATTTCTAGGCCTAGGACCCGAGCCGCTATAGCACGTTTGACTGCACAAAAAAAGTCGAGGCCCAACTTCACCGCATGTGAAATCCTACTT
GAGAGGGGCTTTGATGAAGCACGAGAGTCCATCCCGGAATATGTTAAGAGGAGGCTTGTGGAGAATGGTTGGGAGTCATTGTTTGCCCCAACTACTCTGGTATCC
GAGGCCTTAGTCAAGGAGTTTTATGCTGCCATCAATCCCAACCGAGGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCAAGGATCGAGCTAGGCGATCGACGTGTAAACCATGATAACTCAACCTCGCCAAGAGGAAGAGCTCCATCTCAGTCTTTTCTTAAGGCCGACCTGAAG
GTCTTCCTTAGAGATTATTCAAGGGAGGAACGACCTCCCATACTTAGCCAAATTCCATATGACAATAGTATGAACTGGAATAGCTACTCCCGACAGGCATGCTCA
ACCACAGGTCTTTCCTCCCCAAGTGGCTTTCAGCTCTGCCTGACACTTCAGCTCATCCCAATCAGTCGCCTTGACCCTTTGAGTTGGTCATCCCTTTCCAAAGAT
ACCCAAGCTCTTCCCACGGTCATACCGCTCTCCCATCGATCATACCTAGAGCAGGTCGAGCTCTTCCGCGTTGCCGACCTTGACCAGGTCCACCAGGAAACCAGT
GAGGCATTCAATGAAAGAAGCGAGCTTGAATATGGCGAATCTGAGCTCCTAGTGGACAACGATGATCCACCAACCTTTGAAGTGATAAATGAGGTATGGAAGAAT
AAGGAAGTTGAACATGAGAAACCGGTAGAGATAGAAAGAGGGGAGAGCTCACCAAATTTCAAAGATCAAGTAGAGGAAGAAATAAGAGAAGATGAGATAGGTCAA
GAACAGGTTAGTGGAGACTCAGAACGCGACATGGAGCCCTTGGAGCATTCAGATTTGGCCACGGTCAAAATTCAGTGCCAAATTGCGCCTGGCGCAATTTGGGAT
AAGACTCCACCGGCCACTCTACAAGGTATTTTGTCTCCATCTTTTCCATATGCTATCTTGACTAAAAAGCCCCTAGTTTTTGATGATGTAGAACAGCAAAAGATA
ACGTCGAAAATTGCCAAAATTTTGGTGGTGTTAAATGAAGCAATGAGAGAGGATCTATTGGAGGATGATGGAAAACAAGATGATGAGGAGCCCCCTGCACAAGAG
CAAGAAGGAACATTCGGTCCTGTGGATGTCTCTAAGACTTTAGATGAGGAGGTGAGCTTGACCGAAGTGGTGAAGAAAACACAAAAGAAGATAAAAGTGGCAGAA
ATTGCGCTTGGCGCAATTTCTAGGCCTAGGACCCGAGCCGCTATAGCACGTTTGACTGCACAAAAAAAGTCGAGGCCCAACTTCACCGCATGTGAAATCCTACTT
GAGAGGGGCTTTGATGAAGCACGAGAGTCCATCCCGGAATATGTTAAGAGGAGGCTTGTGGAGAATGGTTGGGAGTCATTGTTTGCCCCAACTACTCTGGTATCC
GAGGCCTTAGTCAAGGAGTTTTATGCTGCCATCAATCCCAACCGAGGGATGTAG
Protein sequenceShow/hide protein sequence
MFSRIELGDRRVNHDNSTSPRGRAPSQSFLKADLKVFLRDYSREERPPILSQIPYDNSMNWNSYSRQACSTTGLSSPSGFQLCLTLQLIPISRLDPLSWSSLSKD
TQALPTVIPLSHRSYLEQVELFRVADLDQVHQETSEAFNERSELEYGESELLVDNDDPPTFEVINEVWKNKEVEHEKPVEIERGESSPNFKDQVEEEIREDEIGQ
EQVSGDSERDMEPLEHSDLATVKIQCQIAPGAIWDKTPPATLQGILSPSFPYAILTKKPLVFDDVEQQKITSKIAKILVVLNEAMREDLLEDDGKQDDEEPPAQE
QEGTFGPVDVSKTLDEEVSLTEVVKKTQKKIKVAEIALGAISRPRTRAAIARLTAQKKSRPNFTACEILLERGFDEARESIPEYVKRRLVENGWESLFAPTTLVS
EALVKEFYAAINPNRGM