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Moc05g24700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g24700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:17565600..17568886
RNA-Seq ExpressionMoc05g24700
SyntenyMoc05g24700
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158219.1 protein NYNRIN-like [Momordica charantia]2.2e-3594.05Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFI+GNSPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
XP_022158520.1 uncharacterized protein LOC111024991 [Momordica charantia]4.9e-3591.67Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSI EPDLMEIGAPESSWM+PI DFIKGNSPQDPKERRKLARRAARFV+RDGALYRRGFSLPLL+CLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
XP_022158854.1 uncharacterized protein LOC111025319 [Momordica charantia]3.8e-3594.05Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSI EPDLMEIGAPESSWMD IADFI+GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]4.7e-3871.17Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDLAWEGPFEIKGIVRPGTYMLADLKGDVLANP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LD +WE  FE+KGIVRPGTYMLADL+  VLA+P
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDLAWEGPFEIKGIVRPGTYMLADLKGDVLANP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP
XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]3.7e-0660Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRK
        +R V +EILDNPSI EPD+ME+  P  SWMDPI +FIKG   Q  KE  K
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRK
XP_022159003.1 uncharacterized protein LOC111025448 [Momordica charantia]9.0e-3796.43Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFI+GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
TrEMBL top hitse value%identityAlignment
A0A6J1C617 Ribonuclease H2.4e-3594.05Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFI+GNSPQDPKERRKLARRAARFVVR  ALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
A0A6J1DXL9 uncharacterized protein LOC1110254482.3e-3871.17Show/hide
Query:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDLAWEGPFEIKGIVRPGTYMLADLKGDVLANP
        +E YEP  NE  LLLNLDLLE +R  AQLRL E Q RMARHYN R++PR+FQVGHLV  ++Q+HVG LD +WE  FE+KGIVRPGTYMLADL+  VLA+P
Subjt:  VEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDLAWEGPFEIKGIVRPGTYMLADLKGDVLANP

Query:  WNAEHLKRYYP
        WNAEHLKRYYP
Subjt:  WNAEHLKRYYP
A0A6J1DXL9 uncharacterized protein LOC1110254481.8e-0660Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRK
        +R V +EILDNPSI EPD+ME+  P  SWMDPI +FIKG   Q  KE  K
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRK
A0A6J1DXL9 uncharacterized protein LOC1110254484.3e-3796.43Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFI+GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
A0A6J1DYS0 Ribonuclease H1.1e-3594.05Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFI+GNSPQDPKERRKLA R ARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
A0A6J1E0M8 uncharacterized protein LOC1110253191.8e-3594.05Show/hide
Query:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
        +RSVPVEILDNPSI EPDLMEIGAPESSWMD IADFI+GNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLT EEGL
Subjt:  SRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRDGALYRRGFSLPLLRCLTLEEGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGCACTCAAAGGCTTGTCGGTCTGCGCCCTCGAAACTCTCAGGGAAGGGACGCTCGAGTTCGAGGCCGACCTGCCGAGGAAGGAATTTGCCGCACCCACTGAG
GAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGCAGGTCGGTCCCCGTCGAGATCTTAGATAATCCTTCGATCTCGGAGCCAGATCTGATGGAGATCGGTGCTCCAG
AGTCCTCATGGATGGACCCGATCGCGGACTTCATTAAGGGCAACTCACCACAAGACCCCAAGGAGCGTAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTTCGAGAT
GGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCTTGAAGAGGGCCTAGTAGAACATTATGAGCCTACGACGAATGAGGATGGGCTGCTCCT
CAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGCGTCCGACCTCGAGCCTTTC
AGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCTGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATG
TTGGCCGATCTGAAAGGAGACGTCCTCGCGAACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGCACTCAAAGGCTTGTCGGTCTGCGCCCTCGAAACTCTCAGGGAAGGGACGCTCGAGTTCGAGGCCGACCTGCCGAGGAAGGAATTTGCCGCACCCACTGAG
GAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGCAGGTCGGTCCCCGTCGAGATCTTAGATAATCCTTCGATCTCGGAGCCAGATCTGATGGAGATCGGTGCTCCAG
AGTCCTCATGGATGGACCCGATCGCGGACTTCATTAAGGGCAACTCACCACAAGACCCCAAGGAGCGTAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTTCGAGAT
GGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTATTGAGATGCCTAACCCTTGAAGAGGGCCTAGTAGAACATTATGAGCCTACGACGAATGAGGATGGGCTGCTCCT
CAACCTCGACTTGTTGGAAGAAAGAAGAGCAATGGCCCAGCTACGCCTGGCGGAATATCAGGGCAGAATGGCCAGACATTACAATGCCCGCGTCCGACCTCGAGCCTTTC
AGGTCGGACATCTGGTCTTAAGGAGGGTCCAAACGCATGTGGGTGCCCTTGACCTGGCCTGGGAGGGCCCGTTTGAGATCAAGGGCATAGTCCGACCTGGGACGTACATG
TTGGCCGATCTGAAAGGAGACGTCCTCGCGAACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequenceShow/hide protein sequence
MPPHSKACRSAPSKLSGKGRSSSRPTCRGRNLPHPLRSSSLFLCLVPRSRSVPVEILDNPSISEPDLMEIGAPESSWMDPIADFIKGNSPQDPKERRKLARRAARFVVRD
GALYRRGFSLPLLRCLTLEEGLVEHYEPTTNEDGLLLNLDLLEERRAMAQLRLAEYQGRMARHYNARVRPRAFQVGHLVLRRVQTHVGALDLAWEGPFEIKGIVRPGTYM
LADLKGDVLANPWNAEHLKRYYP