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Moc05g25010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g25010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:17807842..17808988
RNA-Seq ExpressionMoc05g25010
SyntenyMoc05g25010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142775.1 protein NYNRIN-like [Momordica charantia]1.0e-0590.91Show/hide
Query:  HVRNEEELLLNLDLLDEKREAAQLRLVEYQNRM
        HVRNEEELLLNLDLLDEKRE AQLRL EYQNR+
Subjt:  HVRNEEELLLNLDLLDEKREAAQLRLVEYQNRM

XP_022142775.1 protein NYNRIN-like [Momordica charantia]1.7e-0372.73Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM
        MMEVD QPPSWMD IR+FLE +  +DP+EAKKM
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM

XP_022142775.1 protein NYNRIN-like [Momordica charantia]4.0e-0545.95Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM--RLATCSKMEQCT-GAGFPYPLIKFISKEDGNYHVRNEEE
        M+EV+ Q P WMDPI+ FL  +  +D KEAKKM  R+A     ++     GF  PL++ ISKE+GNY +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM--RLATCSKMEQCT-GAGFPYPLIKFISKEDGNYHVRNEEE

XP_022143565.1 uncharacterized protein LOC111013434 [Momordica charantia]3.2e-0750Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE
        MME+D  PPSWM+PI+ FL    P DP+E KKM R A    +   T    GF  PL+K ISKEDG Y +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE

XP_022156791.1 uncharacterized protein LOC111023625 [Momordica charantia]1.2e-0647.3Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE
        MME+D  P SWM+PI+ FL    P DP+E KKM R A    +   T    GF  PL+KFI +EDG+Y +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE

XP_022157626.1 uncharacterized protein LOC111024288 [Momordica charantia]9.1e-1054.05Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKMRLATCSKM---EQCTGAGFPYPLIKFISKEDGNYHVRNEEE
        MMEVD +P SWMDPIR+FLE + PI+PKEAKKMR  T   +   E     GF  PL+K ISKED +Y ++   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKMRLATCSKM---EQCTGAGFPYPLIKFISKEDGNYHVRNEEE

TrEMBL top hitse value%identityAlignment
A0A6J1CLW5 protein NYNRIN-like5.0e-0690.91Show/hide
Query:  HVRNEEELLLNLDLLDEKREAAQLRLVEYQNRM
        HVRNEEELLLNLDLLDEKRE AQLRL EYQNR+
Subjt:  HVRNEEELLLNLDLLDEKREAAQLRLVEYQNRM

A0A6J1CLW5 protein NYNRIN-like8.1e-0472.73Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM
        MMEVD QPPSWMD IR+FLE +  +DP+EAKKM
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM

A0A6J1CLW5 protein NYNRIN-like1.9e-0545.95Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM--RLATCSKMEQCT-GAGFPYPLIKFISKEDGNYHVRNEEE
        M+EV+ Q P WMDPI+ FL  +  +D KEAKKM  R+A     ++     GF  PL++ ISKE+GNY +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM--RLATCSKMEQCT-GAGFPYPLIKFISKEDGNYHVRNEEE

A0A6J1CP53 Ribonuclease H1.6e-0750Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE
        MME+D  PPSWM+PI+ FL    P DP+E KKM R A    +   T    GF  PL+K ISKEDG Y +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE

A0A6J1DW17 Ribonuclease H6.0e-0747.3Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE
        MME+D  P SWM+PI+ FL    P DP+E KKM R A    +   T    GF  PL+KFI +EDG+Y +R   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKM-RLATCSKMEQCT--GAGFPYPLIKFISKEDGNYHVRNEEE

A0A6J1DYR5 uncharacterized protein LOC1110242884.4e-1054.05Show/hide
Query:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKMRLATCSKM---EQCTGAGFPYPLIKFISKEDGNYHVRNEEE
        MMEVD +P SWMDPIR+FLE + PI+PKEAKKMR  T   +   E     GF  PL+K ISKED +Y ++   E
Subjt:  MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKMRLATCSKM---EQCTGAGFPYPLIKFISKEDGNYHVRNEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGTTGACTTCCAGCCTCCGTCATGGATGGATCCCATTAGGAGCTTCTTAGAAGTCAGTACCCCAATAGACCCGAAGGAAGCCAAGAAGATGCGGCTC
GCTACTTGCTCTAAGATGGAACAATGTACCGGTGCGGGTTTTCCTTACCCCCTCATTAAGTTCATTTCCAAGGAAGATGGGAATTATCATGTTAGGAACGAGGAA
GAGCTACTCCTCAACCTCGACCTCCTTGATGAAAAGAGGGAAGCAGCCCAATTACGTTTGGTAGAGTACCAAAATCGCATGGCAAGCACTACAACTCGAGAGTCC
GACCTCGGAGTTTTCAGGTCGGAAATTTGGTCCTTCGTAAAGTACAGAGGCACGTTGAGACATTGGAACCAAGTTGGGAGGGGCCATTCGAAGTCAAGGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGTTGACTTCCAGCCTCCGTCATGGATGGATCCCATTAGGAGCTTCTTAGAAGTCAGTACCCCAATAGACCCGAAGGAAGCCAAGAAGATGCGGCTC
GCTACTTGCTCTAAGATGGAACAATGTACCGGTGCGGGTTTTCCTTACCCCCTCATTAAGTTCATTTCCAAGGAAGATGGGAATTATCATGTTAGGAACGAGGAA
GAGCTACTCCTCAACCTCGACCTCCTTGATGAAAAGAGGGAAGCAGCCCAATTACGTTTGGTAGAGTACCAAAATCGCATGGCAAGCACTACAACTCGAGAGTCC
GACCTCGGAGTTTTCAGGTCGGAAATTTGGTCCTTCGTAAAGTACAGAGGCACGTTGAGACATTGGAACCAAGTTGGGAGGGGCCATTCGAAGTCAAGGGCATAG
Protein sequenceShow/hide protein sequence
MMEVDFQPPSWMDPIRSFLEVSTPIDPKEAKKMRLATCSKMEQCTGAGFPYPLIKFISKEDGNYHVRNEEELLLNLDLLDEKREAAQLRLVEYQNRMASTTTRES
DLGVFRSEIWSFVKYRGTLRHWNQVGRGHSKSRA