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Moc05g25470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g25470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr5:18071035..18071854
RNA-Seq ExpressionMoc05g25470
SyntenyMoc05g25470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]6.1e-2061.7Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ
        IALL  ++LN ENY QW               VL E+CPQA  PNA  A + AYDRWIKANDKAKVYILA+ISDVLAKKHE  IT +EIM+SLQ
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]2.0e-2666.67Show/hide
Query:  MSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE
        MSKSIALL  +KLND+NYTQW               VL E+CPQAPT NA +ASQDAYDRWIKANDKAK+YILA IS+VLAKKH+S++T REIM+SLQ+
Subjt:  MSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE

XP_022157449.1 uncharacterized protein LOC111024145 [Momordica charantia]1.7e-2559.26Show/hide
Query:  LQKCIRFLRMSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVR
        +Q  + F   +  IALL  EK N ENYTQW               +L EECPQAPTPNA +AS+DAYDRWIKANDKA VYIL +ISDVL+KKHES++T R
Subjt:  LQKCIRFLRMSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVR

Query:  EIMNSLQE
        EIM+SLQ+
Subjt:  EIMNSLQE

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]2.8e-2060.64Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ
        IALL  +KLN ENY QW               VL E+CPQAP  NA  A ++AYDRWIK+NDKAKVYILA+ISDVLAKKHE  +T +EIM+SLQ
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ

XP_022158202.1 uncharacterized protein LOC111024739 [Momordica charantia]1.6e-2364.21Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE
        IALL +EKLN +NYTQW               VL EEC Q PTPNAV+AS+DAYDRWIKANDKAKVYI A+ISDVLAKKH+ ++T REIM+SL++
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE

TrEMBL top hitse value%identityAlignment
A0A6J1DVX8 uncharacterized protein LOC1110235919.5e-2766.67Show/hide
Query:  MSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE
        MSKSIALL  +KLND+NYTQW               VL E+CPQAPT NA +ASQDAYDRWIKANDKAK+YILA IS+VLAKKH+S++T REIM+SLQ+
Subjt:  MSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE

A0A6J1DW68 uncharacterized protein LOC1110246373.0e-2060.64Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ
        I LLV +KLNDENY QW               VL E+CPQAP PNA  A ++ YDRWIKANDKAKV ILA+ISDVLAKKHE+ +  +EIM+SLQ
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ

A0A6J1DWI4 uncharacterized protein LOC1110241458.1e-2659.26Show/hide
Query:  LQKCIRFLRMSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVR
        +Q  + F   +  IALL  EK N ENYTQW               +L EECPQAPTPNA +AS+DAYDRWIKANDKA VYIL +ISDVL+KKHES++T R
Subjt:  LQKCIRFLRMSKSIALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVR

Query:  EIMNSLQE
        EIM+SLQ+
Subjt:  EIMNSLQE

A0A6J1DWL0 uncharacterized protein LOC1110247341.3e-2060.64Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ
        IALL  +KLN ENY QW               VL E+CPQAP  NA  A ++AYDRWIK+NDKAKVYILA+ISDVLAKKHE  +T +EIM+SLQ
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQ

A0A6J1DWL4 uncharacterized protein LOC1110247397.6e-2464.21Show/hide
Query:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE
        IALL +EKLN +NYTQW               VL EEC Q PTPNAV+AS+DAYDRWIKANDKAKVYI A+ISDVLAKKH+ ++T REIM+SL++
Subjt:  IALLVVEKLNDENYTQWS--------------VLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYILANISDVLAKKHESIITVREIMNSLQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCCTCCATTGTTTTGCAACGTGAGCTTTCATACACGGTCGGCGTGTCGTCCTGGAGCGACCACCCCTACGGAGGGTCTGTTGTATGGAATCAAAATCAG
GACGAACTCCAGAAATGTATAAGGTTTCTTAGGATGTCGAAATCTATTGCTCTACTTGTCGTCGAAAAACTTAACGATGAAAATTACACACAATGGAGTGTCCTA
GTTGAGGAGTGTCCTCAGGCTCCCACGCCTAATGCAGTCCAAGCCAGTCAGGATGCCTATGATAGATGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTG
GCAAACATATCTGATGTGCTGGCCAAGAAGCATGAGAGCATAATCACCGTAAGGGAGATCATGAACTCGTTGCAGGAAGACAGCCATCCATTCAAGCCCGACACA
ATGCCCTCAAGTTCATTTACAATTCCTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCCTCCATTGTTTTGCAACGTGAGCTTTCATACACGGTCGGCGTGTCGTCCTGGAGCGACCACCCCTACGGAGGGTCTGTTGTATGGAATCAAAATCAG
GACGAACTCCAGAAATGTATAAGGTTTCTTAGGATGTCGAAATCTATTGCTCTACTTGTCGTCGAAAAACTTAACGATGAAAATTACACACAATGGAGTGTCCTA
GTTGAGGAGTGTCCTCAGGCTCCCACGCCTAATGCAGTCCAAGCCAGTCAGGATGCCTATGATAGATGGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTG
GCAAACATATCTGATGTGCTGGCCAAGAAGCATGAGAGCATAATCACCGTAAGGGAGATCATGAACTCGTTGCAGGAAGACAGCCATCCATTCAAGCCCGACACA
ATGCCCTCAAGTTCATTTACAATTCCTGCATGA
Protein sequenceShow/hide protein sequence
MISSIVLQRELSYTVGVSSWSDHPYGGSVVWNQNQDELQKCIRFLRMSKSIALLVVEKLNDENYTQWSVLVEECPQAPTPNAVQASQDAYDRWIKANDKAKVYIL
ANISDVLAKKHESIITVREIMNSLQEDSHPFKPDTMPSSSFTIPA