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Moc05g25480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g25480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr5:18074985..18075404
RNA-Seq ExpressionMoc05g25480
SyntenyMoc05g25480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN16590.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]4.5e-1744.68Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRVQDQ++ F+V  +MKFP ES+EC  + + D+    E   E  +   E    + L + +EE  E  ++  ++A+  F  R  ESL+ T P  ++ KPSI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK
        EEPP LELK LP HL YAYLG S+TLP+II   ++DL +EK
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK

PIN21729.1 DNA-directed DNA polymerase [Handroanthus impetiginosus]3.5e-1743.26Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRV+DQ++ F+V ++MKFP ES+EC  + + D  +  E  +E  +   E    + L + ++E  E  ++  ++A+  F  R  ESL+ T P  ++ KPSI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK
        EEPP LELK LP HL YAYLG S+TLP+II   ++DL +EK
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK

XP_022143500.1 uncharacterized protein LOC111013378 [Momordica charantia]7.4e-2046.76Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRVQDQE+KFS++DSMK+P ++ E  VL++LD+A+++ L  EAM++         L  A E   E    +C +       R++ESL L +   +  K SI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIIIVADLSLEKE
        EE P L LKA+P+H+KYAYLG+S  LPIIIVA L +EKE
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIIIVADLSLEKE

XP_022144016.1 uncharacterized protein LOC111013805 [Momordica charantia]3.9e-2165.91Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDL
        M VQDQEVKFSVH+SMKF  ESEEC VLKILD+ALMEEL+ E M++  EAV A+S+ +A EE+ ED +S C+N N GFVK++YESLD+
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDL

XP_024022362.1 uncharacterized protein LOC112091881 [Morus notabilis]4.5e-1742.14Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELK---IEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVK--RMYESLDLTNPELRL
        MRV DQ+V F+V  +M+F  E EEC  + ILD  +  E +    E ++   + +D+E       E   D Q + +       K  R +ESLDL+   LR 
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELK---IEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVK--RMYESLDLTNPELRL

Query:  QKPSIEEPPVLELKALPQHLKYAYLGSSETLPIIIVADLS
         KPS+EEPP+LEL+ LP HL+YAYLG S+TLP+II + L+
Subjt:  QKPSIEEPPVLELKALPQHLKYAYLGSSETLPIIIVADLS

TrEMBL top hitse value%identityAlignment
A0A2G9HH15 Reverse transcriptase2.2e-1744.68Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRVQDQ++ F+V  +MKFP ES+EC  + + D+    E   E  +   E    + L + +EE  E  ++  ++A+  F  R  ESL+ T P  ++ KPSI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK
        EEPP LELK LP HL YAYLG S+TLP+II   ++DL +EK
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK

A0A2G9HW58 DNA-directed DNA polymerase1.7e-1743.26Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRV+DQ++ F+V ++MKFP ES+EC  + + D  +  E  +E  +   E    + L + ++E  E  ++  ++A+  F  R  ESL+ T P  ++ KPSI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK
        EEPP LELK LP HL YAYLG S+TLP+II   ++DL +EK
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK

A0A2G9HYD8 Reverse transcriptase3.7e-1743.26Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRVQDQ++ F+V  +MKFP ES+EC  + + D     E   E  +   E    + + + +EE  E  ++  +NA+  F  R  ESL+ T P  ++ KPSI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK
        E+PP LELK LP HL Y YLG S+TLP+II   ++DL +EK
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIII---VADLSLEK

A0A6J1CNZ2 uncharacterized protein LOC1110133783.6e-2046.76Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI
        MRVQDQE+KFS++DSMK+P ++ E  VL++LD+A+++ L  EAM++         L  A E   E    +C +       R++ESL L +   +  K SI
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSI

Query:  EEPPVLELKALPQHLKYAYLGSSETLPIIIVADLSLEKE
        EE P L LKA+P+H+KYAYLG+S  LPIIIVA L +EKE
Subjt:  EEPPVLELKALPQHLKYAYLGSSETLPIIIVADLSLEKE

A0A6J1CS22 uncharacterized protein LOC1110138051.9e-2165.91Show/hide
Query:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDL
        M VQDQEVKFSVH+SMKF  ESEEC VLKILD+ALMEEL+ E M++  EAV A+S+ +A EE+ ED +S C+N N GFVK++YESLD+
Subjt:  MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGTGCAGGATCAAGAAGTGAAATTCTCGGTGCATGACTCTATGAAATTTCCTGTTGAATCAGAAGAGTGCTTAGTATTAAAGATATTGGATCAAGCACTAATGGA
GGAGTTGAAAATAGAAGCCATGGTGAAGCATCCAGAAGCAGTTGACGCTGAAAGTCTTGCCGATGCATCTGAAGAGAAACCAGAAGATGCACAGTCTAACTGTATGAATG
CCAATGTAGGCTTTGTGAAAAGAATGTATGAGTCCTTAGACCTCACAAACCCAGAACTTAGGTTACAGAAGCCATCTATTGAAGAGCCACCAGTGCTAGAGCTTAAAGCA
TTGCCGCAACATTTGAAATATGCTTACTTGGGTTCATCAGAGACATTGCCAATTATCATAGTAGCGGACTTGTCCTTGGAAAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTGTGCAGGATCAAGAAGTGAAATTCTCGGTGCATGACTCTATGAAATTTCCTGTTGAATCAGAAGAGTGCTTAGTATTAAAGATATTGGATCAAGCACTAATGGA
GGAGTTGAAAATAGAAGCCATGGTGAAGCATCCAGAAGCAGTTGACGCTGAAAGTCTTGCCGATGCATCTGAAGAGAAACCAGAAGATGCACAGTCTAACTGTATGAATG
CCAATGTAGGCTTTGTGAAAAGAATGTATGAGTCCTTAGACCTCACAAACCCAGAACTTAGGTTACAGAAGCCATCTATTGAAGAGCCACCAGTGCTAGAGCTTAAAGCA
TTGCCGCAACATTTGAAATATGCTTACTTGGGTTCATCAGAGACATTGCCAATTATCATAGTAGCGGACTTGTCCTTGGAAAAGGAATAG
Protein sequenceShow/hide protein sequence
MRVQDQEVKFSVHDSMKFPVESEECLVLKILDQALMEELKIEAMVKHPEAVDAESLADASEEKPEDAQSNCMNANVGFVKRMYESLDLTNPELRLQKPSIEEPPVLELKA
LPQHLKYAYLGSSETLPIIIVADLSLEKE