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Moc05g25730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g25730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr5:18231026..18233591
RNA-Seq ExpressionMoc05g25730
SyntenyMoc05g25730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.1e-3344.61Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------
        M G KRK QN  EYKG +VVVTANNSK+PI  + KT+ +  SNSN+V+L+N+FYV G +KNLV + QLTSAG FV+FGPD V +                
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------

Query:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                       K  K     L HARL H++ +KLK +++++MLK   Q+D+ +DM C G QY KAHQ   K+S+F A+Q LEL+H D  +  K+ S
Subjt:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        +  M
Subjt:  IQEM

KAE8676439.1 hypothetical protein F3Y22_tig00111614pilonHSYRG00169 [Hibiscus syriacus]6.7e-3141.18Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------
        M G K+K QN++EY GG+VVVTA+NS++PI  I KT+     N+N+V+L+++++VPG +KNL+ + QLTS+G++VLFGP  V +                
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------

Query:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                       +I K     L H RL H++Y+KL +M+ RSMLK   Q+DV  D  C G QY KAHQ    ES+F A++ LEL+H D     K++S
Subjt:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        I  M
Subjt:  IQEM

KAG6519128.1 hypothetical protein ZIOFF_022617 [Zingiber officinale]1.9e-3040.2Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------
        M G K K QN+++YKG ++VVTA+NS++PI  + KTV     NSN+V L+++++VPG +KNL+ + QLTS+G++VLFGP+ V +                
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------

Query:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                       K  K    ++ H RL H++Y+KL MMM +SMLK   Q+D+  D  C G QY KAHQ   +ES F A++ LEL+H D     K+ S
Subjt:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        I  M
Subjt:  IQEM

TYK03493.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-3047.98Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCIKISKLMVKILLHARLD
        M   KRK QN+ EYKG +VVVTANNSK+PI  + KT+ +  SNSN+V+L+N+FYVPG +KNLV IPQLTSA  FV+FGP                    +
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCIKISKLMVKILLHARLD

Query:  HINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM
          +Y+KLK ++++ MLK   Q+D+ +DM CV  QY KAHQ   KES+F A+Q LEL+H +     K+ S+  M
Subjt:  HINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]5.1e-3142.5Show/hide
Query:  KRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI--------------------
        KRK Q+  EYKG +V VTANNSK+PI  + KT+ +   NSN+V+L+N+FYV   +KNLV + QLTSA  F++FG + V +                    
Subjt:  KRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI--------------------

Query:  -----------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM
                   K  K     L HARL H++Y+KLK ++++ MLK   Q+D+ +DM CVG+QY KAHQP  K+S+F A+Q LEL+H D     K+ SI  M
Subjt:  -----------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM

TrEMBL top hitse value%identityAlignment
A0A2N9EFK1 Uncharacterized protein5.5e-3142.65Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----KISKLMV-----
        M G K K QN++EYKGG+VVVTA+NS++PI  I KT+     NSN+V L+++++VPG +KNL+ + QLT +G++VLFGP  V +    KIS+  +     
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----KISKLMV-----

Query:  ----------------------KILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                                L H RL H++Y+KL +M+ +SMLK   Q+DV  D  CVG QY KAHQ   KES+F A++ LEL+H D     K+ S
Subjt:  ----------------------KILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        I  M
Subjt:  IQEM

A0A2N9FT11 Uncharacterized protein4.2e-3142.44Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----KISKLMV-----
        M G K K QN++EYKGG+VVVTA+NS++PI  I KT+     NSN+V L+++++VPG +KNL+ + QLT +G++VLFGP  V +    KIS+  +     
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----KISKLMV-----

Query:  ----------------------KILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                                L H RL H++Y+KL +M+ +SMLK   Q+DV  D  C G QY KAHQ   KES+F A++ LEL+H D     K+ S
Subjt:  ----------------------KILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEMS
        I E S
Subjt:  IQEMS

A0A5A7TYD2 Integrase, catalytic core5.3e-3444.61Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------
        M G KRK QN  EYKG +VVVTANNSK+PI  + KT+ +  SNSN+V+L+N+FYV G +KNLV + QLTSAG FV+FGPD V +                
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------

Query:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                       K  K     L HARL H++ +KLK +++++MLK   Q+D+ +DM C G QY KAHQ   K+S+F A+Q LEL+H D  +  K+ S
Subjt:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        +  M
Subjt:  IQEM

A0A5D3DG87 Integrase, catalytic core2.5e-3142.5Show/hide
Query:  KRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI--------------------
        KRK Q+  EYKG +V VTANNSK+PI  + KT+ +   NSN+V+L+N+FYV   +KNLV + QLTSA  F++FG + V +                    
Subjt:  KRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI--------------------

Query:  -----------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM
                   K  K     L HARL H++Y+KLK ++++ MLK   Q+D+ +DM CVG+QY KAHQP  K+S+F A+Q LEL+H D     K+ SI  M
Subjt:  -----------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEM

A0A6A2YGP3 Uncharacterized protein3.2e-3141.18Show/hide
Query:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------
        M G K+K QN++EY GG+VVVTA+NS++PI  I KT+     N+N+V+L+++++VPG +KNL+ + QLTS+G++VLFGP  V +                
Subjt:  MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCI----------------

Query:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS
                       +I K     L H RL H++Y+KL +M+ RSMLK   Q+DV  D  C G QY KAHQ    ES+F A++ LEL+H D     K++S
Subjt:  ---------------KISKLMVKILLHARLDHINYNKLKMMMSRSMLK--VQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERS

Query:  IQEM
        I  M
Subjt:  IQEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGTGGTAAAAGGAAGCCGCAGAATATGACAGAATACAAAGGGGGTCAAGTTGTTGTAACTGCAAACAACTCGAAAGTGCCAATAATTAGTATCGACAAGACTGT
GGAATTGTGTCACTCAAATTCAAATGAAGTAAAGTTGGAGAACATATTTTATGTTCCTGGGAGGGAGAAGAATTTGGTGCCAATACCTCAATTAACGTCAGCAGGTTACT
TTGTTTTGTTTGGTCCTGACGGTGTGTGTATCAAGATCTCCAAGTTAATGGTGAAAATTTTGTTGCATGCACGACTTGATCATATCAACTACAACAAATTGAAAATGATG
ATGAGCAGGTCCATGCTCAAGGTTCAAGTTGATGTTGGCAAAGATATGACATGTGTTGGATACCAGTATGAGAAGGCGCATCAACCACTATTAAAGGAGTCTGAATTCAA
TGCACGACAAACATTAGAGCTAATGCACTTTGATGATGAAAACACCTTCAAAGAACGATCAATACAAGAGATGAGTAAAATTGCAGCTCGAACTCGGCCTCCGGACCGAT
CTGAATACTTAGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCGGATTCCCAGTTTAGTTCGAGGTCAGAAATCATCGTACCTGATCGTG
GAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGGTGGTAAAAGGAAGCCGCAGAATATGACAGAATACAAAGGGGGTCAAGTTGTTGTAACTGCAAACAACTCGAAAGTGCCAATAATTAGTATCGACAAGACTGT
GGAATTGTGTCACTCAAATTCAAATGAAGTAAAGTTGGAGAACATATTTTATGTTCCTGGGAGGGAGAAGAATTTGGTGCCAATACCTCAATTAACGTCAGCAGGTTACT
TTGTTTTGTTTGGTCCTGACGGTGTGTGTATCAAGATCTCCAAGTTAATGGTGAAAATTTTGTTGCATGCACGACTTGATCATATCAACTACAACAAATTGAAAATGATG
ATGAGCAGGTCCATGCTCAAGGTTCAAGTTGATGTTGGCAAAGATATGACATGTGTTGGATACCAGTATGAGAAGGCGCATCAACCACTATTAAAGGAGTCTGAATTCAA
TGCACGACAAACATTAGAGCTAATGCACTTTGATGATGAAAACACCTTCAAAGAACGATCAATACAAGAGATGAGTAAAATTGCAGCTCGAACTCGGCCTCCGGACCGAT
CTGAATACTTAGGCGGACCTGCACAAAAAGGTGAGCACTCCGACGATCAAGTCAGTATAGGTCGGATTCCCAGTTTAGTTCGAGGTCAGAAATCATCGTACCTGATCGTG
GAGTGA
Protein sequenceShow/hide protein sequence
MIGGKRKPQNMTEYKGGQVVVTANNSKVPIISIDKTVELCHSNSNEVKLENIFYVPGREKNLVPIPQLTSAGYFVLFGPDGVCIKISKLMVKILLHARLDHINYNKLKMM
MSRSMLKVQVDVGKDMTCVGYQYEKAHQPLLKESEFNARQTLELMHFDDENTFKERSIQEMSKIAARTRPPDRSEYLGGPAQKGEHSDDQVSIGRIPSLVRGQKSSYLIV
E