CuGenDBv2

Gene ID	Moc05g25760
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein FAR1-RELATED SEQUENCE 4-like
Genome location	chr5:18282065..18282586
RNA-Seq Expression	Moc05g25760
Synteny	Moc05g25760
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0032196 - transposition (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022146373.1 uncharacterized protein LOC111015601 [Momordica charantia]

1.5e-55

65.7

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHI-------------------------REKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQT+LRYT MTTN+ ESVNA F+H  KLPVTALLDHI                          E M+AEYSDS  RH+V NIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHI-------------------------REKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        F+VRD NLDGIVDLN+ TCSCREFDYF+IP  H IA A +RNIN Y+LCDEAYTTNF ILAY E IFPV HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

XP_022148136.1 uncharacterized protein LOC111016889 [Momordica charantia]

2.0e-55

65.7

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WA CFQTELRYTQMT+N AESVNA FRHT +LPVTALLDHIR                         E   AEY D+  RH+VVNIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
         +VRDGNLDGIVD NSRTCSCREFDYF+IP  H IAGAM+RNIN Y LCDEAYTTN  ++AY E IFP+ HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

XP_022153146.1 uncharacterized protein LOC111020715 [Momordica charantia]

5.2e-56

66.28

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQTELRYTQMT+N AESVNA FRH  KLPVTALLDHIR                         E   AEYSD+  RH+VVNIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
         +VRDGNLDGIVD NSRTC+CREFDYF+IP  H IA AM+RNIN YTLCDEAYTTN  ++AY E IFP+ HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

XP_022154439.1 uncharacterized protein LOC111021710 [Momordica charantia]

2.3e-80

100

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Query:  MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF
        MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF
Subjt:  MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF

Query:  DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
Subjt:  DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]

6.6e-59

69.19

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQT+LRYTQMTTN+AESVNAFFRH  KLPVTALLDHIR                         E M+AEYSDS  RH+V NIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        F+VRDGN DGIVDLN+ TCSCREFDYF+IP  HVIA AM+RNIN Y+LCDEAYTTN  ILAY E IFPV HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CYE7 uncharacterized protein LOC111015601

7.4e-56

65.7

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHI-------------------------REKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQT+LRYT MTTN+ ESVNA F+H  KLPVTALLDHI                          E M+AEYSDS  RH+V NIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHI-------------------------REKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        F+VRD NLDGIVDLN+ TCSCREFDYF+IP  H IA A +RNIN Y+LCDEAYTTNF ILAY E IFPV HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

A0A6J1D4G8 uncharacterized protein LOC111016889

9.7e-56

65.7

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WA CFQTELRYTQMT+N AESVNA FRHT +LPVTALLDHIR                         E   AEY D+  RH+VVNIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
         +VRDGNLDGIVD NSRTCSCREFDYF+IP  H IAGAM+RNIN Y LCDEAYTTN  ++AY E IFP+ HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

A0A6J1DJT1 uncharacterized protein LOC111020715

2.5e-56

66.28

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQTELRYTQMT+N AESVNA FRH  KLPVTALLDHIR                         E   AEYSD+  RH+VVNIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
         +VRDGNLDGIVD NSRTC+CREFDYF+IP  H IA AM+RNIN YTLCDEAYTTN  ++AY E IFP+ HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

A0A6J1DK35 uncharacterized protein LOC111021833

3.2e-59

69.19

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Query:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH
        EYLDDI KE WARCFQT+LRYTQMTTN+AESVNAFFRH  KLPVTALLDHIR                         E M+AEYSDS  RH+V NIDQFH
Subjt:  EYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIR-------------------------EKMFAEYSDSTMRHIVVNIDQFH

Query:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        F+VRDGN DGIVDLN+ TCSCREFDYF+IP  HVIA AM+RNIN Y+LCDEAYTTN  ILAY E IFPV HV
Subjt:  FEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

A0A6J1DM36 uncharacterized protein LOC111021710

1.1e-80

100

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Query:  MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF
        MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF
Subjt:  MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREF

Query:  DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
Subjt:  DYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

5.0e-04

36.67

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Query:  GIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPV
        GIV LN  TC+C EF   + P LH +A      IN     D+ YT       Y+    PV
Subjt:  GIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPV

AT1G64260.1 MuDR family transposase

3.1e-06

28.26

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Query:  EYSDSTMRHIVVNIDQFHFEVRDGN--LDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV
        E+   ++ +++  +++  F+V + +   + IV LN  TC+CR+F  ++ P LH +A      IN     DE YT       Y  +  PV  V
Subjt:  EYSDSTMRHIVVNIDQFHFEVRDGN--LDGIVDLNSRTCSCREFDYFRIPRLHVIAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

Sequences

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CDS sequence

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ATGGAATACCTAGACGACATTGAGAAGGAACATTGGGCTCGTTGTTTCCAAACTGAATTGAGGTACACTCAGATGACCACTAATGTTGCTGAGTCTGTAAATGCCTTCTT
TAGGCACACGCCTAAGTTGCCAGTGACTGCTTTACTTGACCACATTAGAGAAAAGATGTTCGCTGAATACTCAGATAGTACCATGAGACACATTGTAGTCAACATCGACC
AGTTTCATTTCGAGGTACGTGATGGCAACCTTGACGGGATTGTTGATTTAAACTCTAGAACATGTAGTTGTCGGGAGTTCGATTACTTTAGAATTCCACGTTTACATGTT
ATTGCCGGGGCGATGGTACGCAACATAAATCTATACACTCTGTGTGACGAGGCGTACACGACGAACTTTTTGATTTTGGCTTATACAGAATCAATCTTTCCAGTCAGACA
CGTCTAG

mRNA sequence

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Protein sequence

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MEYLDDIEKEHWARCFQTELRYTQMTTNVAESVNAFFRHTPKLPVTALLDHIREKMFAEYSDSTMRHIVVNIDQFHFEVRDGNLDGIVDLNSRTCSCREFDYFRIPRLHV
IAGAMVRNINLYTLCDEAYTTNFLILAYTESIFPVRHV

Moc05g25760 (gene) of Bitter gourd (OHB3-1) v2 genome