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Moc05g25890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g25890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr5:18359025..18363063
RNA-Seq ExpressionMoc05g25890
SyntenyMoc05g25890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]9.3e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]9.3e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]9.3e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

XP_022158689.1 uncharacterized protein LOC111025150 [Momordica charantia]1.1e-1763.75Show/hide
Query:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASA--PSSSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS
        LW FQLT+ILKAHK YGF+DGS+ KP+  L S    SSS PP  N AF +W AKDHALM ++NA LS  ALAYVVGC+ S
Subjt:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASA--PSSSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]4.2e-1761.25Show/hide
Query:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPS--SSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS
        +W FQL +ILKAHK YGF+DGS+ KP+  L S+    SS  P  N AF DW AKDHALM ++NATLSP ALAY+VGC+ S
Subjt:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPS--SSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X24.5e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X14.5e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

A0A5D3CLI6 T4.54.5e-1749.21Show/hide
Query:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK
        S STTL  +    DS+     P+ +L   S++  L+  + D T     LW FQLT+ILKAHK YGF+DG++  P     S+ +S+ PPQ N ++EDW AK
Subjt:  SGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAK

Query:  DHALMMVINATLSPIALAYVVGCEMS
        D ALM VINATLSP ALAYVVG   S
Subjt:  DHALMMVINATLSPIALAYVVGCEMS

A0A6J1DYF1 uncharacterized protein LOC1110257092.0e-1761.25Show/hide
Query:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPS--SSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS
        +W FQL +ILKAHK YGF+DGS+ KP+  L S+    SS  P  N AF DW AKDHALM ++NATLSP ALAY+VGC+ S
Subjt:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPS--SSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS

A0A6J1E049 uncharacterized protein LOC1110251505.3e-1863.75Show/hide
Query:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASA--PSSSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS
        LW FQLT+ILKAHK YGF+DGS+ KP+  L S    SSS PP  N AF +W AKDHALM ++NA LS  ALAYVVGC+ S
Subjt:  LWVFQLTSILKAHKFYGFVDGSSIKPSLHLASA--PSSSWPPQPNLAFEDWTAKDHALMMVINATLSPIALAYVVGCEMS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGCAGTGGGTCAACTACACTTGAGTTGGCTTTACAACTCGATGACAGCATGCAAGTTATGAGCATGCCTATGGCCATTCTAAAATTCAAGTCTTCGATGGAAGC
ACTAGTTGGAAAGCAGTTTGATCTCACCCCTCCCTGTGAAGACCTTTGGGTGTTCCAATTGACCTCAATTTTGAAGGCACACAAGTTCTATGGCTTCGTTGATGGGTCAA
GCATCAAGCCTTCCCTTCATCTAGCATCTGCTCCGTCCTCTTCTTGGCCACCACAACCCAATCTTGCCTTTGAAGATTGGACTGCAAAGGATCACGCTCTTATGATGGTG
ATCAATGCTACCTTGTCGCCTATTGCTCTTGCCTATGTCGTTGGCTGCGAGATGTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGCAGTGGGTCAACTACACTTGAGTTGGCTTTACAACTCGATGACAGCATGCAAGTTATGAGCATGCCTATGGCCATTCTAAAATTCAAGTCTTCGATGGAAGC
ACTAGTTGGAAAGCAGTTTGATCTCACCCCTCCCTGTGAAGACCTTTGGGTGTTCCAATTGACCTCAATTTTGAAGGCACACAAGTTCTATGGCTTCGTTGATGGGTCAA
GCATCAAGCCTTCCCTTCATCTAGCATCTGCTCCGTCCTCTTCTTGGCCACCACAACCCAATCTTGCCTTTGAAGATTGGACTGCAAAGGATCACGCTCTTATGATGGTG
ATCAATGCTACCTTGTCGCCTATTGCTCTTGCCTATGTCGTTGGCTGCGAGATGTCCTAA
Protein sequenceShow/hide protein sequence
MDRSGSTTLELALQLDDSMQVMSMPMAILKFKSSMEALVGKQFDLTPPCEDLWVFQLTSILKAHKFYGFVDGSSIKPSLHLASAPSSSWPPQPNLAFEDWTAKDHALMMV
INATLSPIALAYVVGCEMS