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Moc05g26580 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g26580
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr5:19093654..19094415
RNA-Seq ExpressionMoc05g26580
SyntenyMoc05g26580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.2e-5150.63Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK + NGKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYT TT+P+EQVLMEI++  LL+WPE+M A+S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FH D GH+T DC+++KE                        E +KS AREI+ I+ GP+  ESGRKRK +VREA+A+   +EVYH     +   IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVITLKI NV+VH++LVD GSS DI+S
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]1.1e-3950.85Show/hide
Query:  IPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGES
        +P+EQVLMEI+   LL+WPE+M A   KR+KGRYCLFHRD  H+T DC+++K+E                         D+KS AREI+ I+ GP+  E 
Subjt:  IPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGES

Query:  GRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL
        GRKRKA++RE + +   HE+YHT    Q +KIEFS  E  +L  PHND LVITLKI N KVH++LVD GSS DI+SL
Subjt:  GRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL

XP_022151636.1 uncharacterized protein LOC111019544 [Momordica charantia]1.5e-4154.71Show/hide
Query:  MEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGESGRKRKAN
        MEI+D  L +WPE+MKA+ +KR+KGRYCLFHRD GH+THDC+++KEE                         DNKS AREI+ I+ G    ESGRKRK +
Subjt:  MEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGESGRKRKAN

Query:  VREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL
        VREA+  LG +EVYHT FV + SKIE S  E A+L  PHNDALVITL+I N +VH++L DRGSS  I+SL
Subjt:  VREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-5553.14Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK +P+GKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYTPTT+PIEQVLMEI+D  LL+WPE+MKA+S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FHRD GH+T DC+++KE                        E +KS AREI+ I+ GP+  ESGRKRKA+VREA+ +   +EVYH     +   IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVI LKI NVKVH+VLVD GSS DI+S
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.4e-5251.05Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK +P+GKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYTPTT+P+EQVLMEI+D  LL+WPE+MK  S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FHRD  H+T D +++KE                        E  KS AREI+ I+ GP+  ES RKRKA+VREA+ +   +EVYH     ++  IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVITLKI NVKVH++LVD GSS DI+S
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128055.8e-5250.63Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK + NGKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYT TT+P+EQVLMEI++  LL+WPE+M A+S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FH D GH+T DC+++KE                        E +KS AREI+ I+ GP+  ESGRKRK +VREA+A+   +EVYH     +   IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVITLKI NV+VH++LVD GSS DI+S
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

A0A6J1D8C9 uncharacterized protein LOC1110183005.1e-4050.85Show/hide
Query:  IPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGES
        +P+EQVLMEI+   LL+WPE+M A   KR+KGRYCLFHRD  H+T DC+++K+E                         D+KS AREI+ I+ GP+  E 
Subjt:  IPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGES

Query:  GRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL
        GRKRKA++RE + +   HE+YHT    Q +KIEFS  E  +L  PHND LVITLKI N KVH++LVD GSS DI+SL
Subjt:  GRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL

A0A6J1DF96 uncharacterized protein LOC1110195447.2e-4254.71Show/hide
Query:  MEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGESGRKRKAN
        MEI+D  L +WPE+MKA+ +KR+KGRYCLFHRD GH+THDC+++KEE                         DNKS AREI+ I+ G    ESGRKRK +
Subjt:  MEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTHDCYNIKEE-------------------------DNKSLAREIKPILRGPVGGESGRKRKAN

Query:  VREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL
        VREA+  LG +EVYHT FV + SKIE S  E A+L  PHNDALVITL+I N +VH++L DRGSS  I+SL
Subjt:  VREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSL

A0A6J1DWY0 uncharacterized protein LOC1110252936.7e-5653.56Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK +P+GKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYTPTT+PIEQVLMEI+D  LL+WPE+MKA+S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FHRD GH+T DC+++KE                        E +KS AREI+ I+ GP+  ESGRKRKA+VREA+ +   +EVYH     +   IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVI LKI NVKVH+VLVD GSS DILS
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

A0A6J1DYL6 uncharacterized protein LOC1110257856.9e-5351.05Show/hide
Query:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL
        MS GE F SK +P+GKR     +  R+RS +K   S WEK    RD++ Q+D  ++FEKYTPTT+P+EQVLMEI+D  LL+WPE+MK  S KR+KGRYCL
Subjt:  MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCL

Query:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG
        FHRD  H+T D +++KE                        E  KS AREI+ I+ GP+  ES RKRKA+VREA+ +   +EVYH     ++  IEFS  
Subjt:  FHRDRGHSTHDCYNIKE------------------------EDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGG

Query:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS
        E  +L  PHNDALVITLKI NVKVH++LVD GSS DI+S
Subjt:  EVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACGGGAGAATTATTCAATTCAAAATGGGATCCTAACGGTAAACGTGGTCAAATAGAACACAACATGAATAGAGATAGGTCTAGAGAGAAACAATCTAGATCAAT
GTGGGAAAAAGCTGACCGTACGCGGGACCAGACAGGTCAACGTGATCTGTCGAAAAGGTTCGAGAAATATACCCCAACAACGATCCCAATCGAACAGGTTTTGATGGAGA
TACGGGACAATATATTGCTCAGATGGCCCGAGAAGATGAAAGCAGCCTCTCACAAGAGGGCTAAAGGGAGATACTGCCTCTTTCATCGGGATCGTGGCCACTCAACACAT
GATTGTTATAATATCAAGGAAGAGGACAACAAGTCTCTCGCTAGGGAGATAAAGCCAATATTAAGAGGGCCTGTAGGAGGAGAATCTGGCAGAAAGAGAAAAGCAAATGT
CAGGGAGGCTAAGGCAAATTTAGGAACCCATGAAGTCTACCATACTTGCTTTGTATGTCAAACCTCAAAGATCGAGTTCTCTGGAGGAGAAGTGGCGAACCTACATGACC
CACACAACGATGCATTAGTTATCACTCTGAAGATAGTGAACGTTAAAGTTCATCAGGTCTTGGTGGATAGGGGTAGCTCAACAGACATACTATCTCTGAACATTTCATCC
CTAAAGGAAGTATCGAATTACTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACGGGAGAATTATTCAATTCAAAATGGGATCCTAACGGTAAACGTGGTCAAATAGAACACAACATGAATAGAGATAGGTCTAGAGAGAAACAATCTAGATCAAT
GTGGGAAAAAGCTGACCGTACGCGGGACCAGACAGGTCAACGTGATCTGTCGAAAAGGTTCGAGAAATATACCCCAACAACGATCCCAATCGAACAGGTTTTGATGGAGA
TACGGGACAATATATTGCTCAGATGGCCCGAGAAGATGAAAGCAGCCTCTCACAAGAGGGCTAAAGGGAGATACTGCCTCTTTCATCGGGATCGTGGCCACTCAACACAT
GATTGTTATAATATCAAGGAAGAGGACAACAAGTCTCTCGCTAGGGAGATAAAGCCAATATTAAGAGGGCCTGTAGGAGGAGAATCTGGCAGAAAGAGAAAAGCAAATGT
CAGGGAGGCTAAGGCAAATTTAGGAACCCATGAAGTCTACCATACTTGCTTTGTATGTCAAACCTCAAAGATCGAGTTCTCTGGAGGAGAAGTGGCGAACCTACATGACC
CACACAACGATGCATTAGTTATCACTCTGAAGATAGTGAACGTTAAAGTTCATCAGGTCTTGGTGGATAGGGGTAGCTCAACAGACATACTATCTCTGAACATTTCATCC
CTAAAGGAAGTATCGAATTACTTGTGA
Protein sequenceShow/hide protein sequence
MSTGELFNSKWDPNGKRGQIEHNMNRDRSREKQSRSMWEKADRTRDQTGQRDLSKRFEKYTPTTIPIEQVLMEIRDNILLRWPEKMKAASHKRAKGRYCLFHRDRGHSTH
DCYNIKEEDNKSLAREIKPILRGPVGGESGRKRKANVREAKANLGTHEVYHTCFVCQTSKIEFSGGEVANLHDPHNDALVITLKIVNVKVHQVLVDRGSSTDILSLNISS
LKEVSNYL