; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g27320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g27320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr5:19716458..19717409
RNA-Seq ExpressionMoc05g27320
SyntenyMoc05g27320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.2e-3642.19Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--
        M EKVPPKFKLP++K++DG+ DP+DHLD Y EW D+YG+ EAIRC +FSFTL GS R+WF+QLKR SISSFK LARAFV QF GG NRSRPVAYLLTI  
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--

Query:  ------------------------------------------------------------------------KKSPKGGAL---PKKREVREKPLSSKWE
                                                                                K+ PKG       K++   EK    +WE
Subjt:  ------------------------------------------------------------------------KKSPKGGAL---PKKREVREKPLSSKWE

Query:  KRD----RVVEQKDLPRKFEKYTPTTILLKQDCFDLK
        + D    R+V Q+D  RKFEKYTPTT+ L+Q   ++K
Subjt:  KRD----RVVEQKDLPRKFEKYTPTTILLKQDCFDLK

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.3e-3879Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M  KVPPKFKLP++KQFDGT+D VDHLDAY+EWMD+YGV EA++C +FS TL GSARVWFRQLKRGSISSFKSLA+AFV QF+GG++RSRPVAYLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.4e-3269Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M EK  PKFKLP++ ++DG+ DP+DHLDAY+EW D+Y + EAIRC +FSFTL GSAR WFRQLKR SISSFK LA AFV QFVGG+ +S+PV YLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]9.6e-6148.58Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--
        M EKVPPKFKLP++KQFD T DPVDHLDAY+EWMD+YGV EA+RC +FS TL GSAR+WFRQLKRGSISSFKSLARAFV QFVGG+ RSRPVAYLLTI  
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--

Query:  ------------------------------------------------------------------------KKSPKGGAL-PKKREVREKPLSSKWEKR
                                                                                K+ P G    PK+    +KP  S+WEKR
Subjt:  ------------------------------------------------------------------------KKSPKGGAL-PKKREVREKPLSSKWEKR

Query:  DRVVEQKDLPRKFEKYTPTTI-------------LLK----------------------------QDCFDLKEEVEGLIRKGYLKEYVDDLKATPNMEND
        DR   QKD PRKFEKYTPTT+             LLK                            QDCFDLKEEVEGLIR+GYLKEYV++ KAT N E+D
Subjt:  DRVVEQKDLPRKFEKYTPTTI-------------LLK----------------------------QDCFDLKEEVEGLIRKGYLKEYVDDLKATPNMEND

Query:  NKSPAREIRTIMGGSTE
         KSPAREIRTIMGG  E
Subjt:  NKSPAREIRTIMGGSTE

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.7e-3759.48Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M EKVPPKFKLP++K FDG  +PVDHLDAY+EWMD+YGV +AIRC +FS TL GSAR+WFRQLKRGSISSFKSLARAF+ QFVGG+ RSRPVAYLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

Query:  SPKGGALPKKREVREKPLSSKWEKRDRV--------VEQKDLPRKFEKYTPTT
                      E+ L  +    D V        V  + L   FEK TP+T
Subjt:  SPKGGALPKKREVREKPLSSKWEKRDRV--------VEQKDLPRKFEKYTPTT

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.0e-3642.19Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--
        M EKVPPKFKLP++K++DG+ DP+DHLD Y EW D+YG+ EAIRC +FSFTL GS R+WF+QLKR SISSFK LARAFV QF GG NRSRPVAYLLTI  
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--

Query:  ------------------------------------------------------------------------KKSPKGGAL---PKKREVREKPLSSKWE
                                                                                K+ PKG       K++   EK    +WE
Subjt:  ------------------------------------------------------------------------KKSPKGGAL---PKKREVREKPLSSKWE

Query:  KRD----RVVEQKDLPRKFEKYTPTTILLKQDCFDLK
        + D    R+V Q+D  RKFEKYTPTT+ L+Q   ++K
Subjt:  KRD----RVVEQKDLPRKFEKYTPTTILLKQDCFDLK

A0A6J1D7D2 uncharacterized protein LOC1110183076.5e-3979Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M  KVPPKFKLP++KQFDGT+D VDHLDAY+EWMD+YGV EA++C +FS TL GSARVWFRQLKRGSISSFKSLA+AFV QF+GG++RSRPVAYLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

A0A6J1DWY0 uncharacterized protein LOC1110252934.7e-6148.58Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--
        M EKVPPKFKLP++KQFD T DPVDHLDAY+EWMD+YGV EA+RC +FS TL GSAR+WFRQLKRGSISSFKSLARAFV QFVGG+ RSRPVAYLLTI  
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTI--

Query:  ------------------------------------------------------------------------KKSPKGGAL-PKKREVREKPLSSKWEKR
                                                                                K+ P G    PK+    +KP  S+WEKR
Subjt:  ------------------------------------------------------------------------KKSPKGGAL-PKKREVREKPLSSKWEKR

Query:  DRVVEQKDLPRKFEKYTPTTI-------------LLK----------------------------QDCFDLKEEVEGLIRKGYLKEYVDDLKATPNMEND
        DR   QKD PRKFEKYTPTT+             LLK                            QDCFDLKEEVEGLIR+GYLKEYV++ KAT N E+D
Subjt:  DRVVEQKDLPRKFEKYTPTTI-------------LLK----------------------------QDCFDLKEEVEGLIRKGYLKEYVDDLKATPNMEND

Query:  NKSPAREIRTIMGGSTE
         KSPAREIRTIMGG  E
Subjt:  NKSPAREIRTIMGGSTE

A0A6J1DZ49 uncharacterized protein LOC1110248517.0e-3369Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M EK  PKFKLP++ ++DG+ DP+DHLDAY+EW D+Y + EAIRC +FSFTL GSAR WFRQLKR SISSFK LA AFV QFVGG+ +S+PV YLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

A0A6J1E1E7 uncharacterized protein LOC1110255484.7e-3759.48Show/hide
Query:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK
        M EKVPPKFKLP++K FDG  +PVDHLDAY+EWMD+YGV +AIRC +FS TL GSAR+WFRQLKRGSISSFKSLARAF+ QFVGG+ RSRPVAYLLTIK+
Subjt:  MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKK

Query:  SPKGGALPKKREVREKPLSSKWEKRDRV--------VEQKDLPRKFEKYTPTT
                      E+ L  +    D V        V  + L   FEK TP+T
Subjt:  SPKGGALPKKREVREKPLSSKWEKRDRV--------VEQKDLPRKFEKYTPTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGAAAGTCCCTCCGAAATTCAAGCTACCATCTCTAAAGCAGTTCGACGGAACGATTGACCCGGTTGATCATCTTGATGCTTACCAAGAATGGATGGACATGTA
CGGGGTCTTAGAGGCAATCCGATGCTGCATTTTCTCTTTCACCCTAGGTGGATCAGCTAGGGTTTGGTTCCGACAACTAAAGCGAGGGTCGATTTCAAGCTTCAAAAGCT
TGGCCAGGGCGTTTGTAAACCAATTTGTAGGAGGTCAGAATCGGAGTCGGCCAGTGGCGTATCTCTTAACCATTAAAAAGAGCCCGAAGGGAGGTGCGCTACCAAAAAAG
AGAGAAGTCAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGAACAGAAAGATCTACCTCGGAAGTTTGAAAAGTATACTCCGACCACTATTCT
ATTGAAGCAGGATTGCTTTGATCTTAAAGAAGAGGTAGAAGGGCTCATTCGGAAAGGGTACCTCAAAGAATATGTGGATGATCTCAAAGCAACTCCAAATATGGAAAATG
ACAACAAATCCCCTGCCAGAGAAATTCGTACGATCATGGGAGGTTCAACAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGAAAGTCCCTCCGAAATTCAAGCTACCATCTCTAAAGCAGTTCGACGGAACGATTGACCCGGTTGATCATCTTGATGCTTACCAAGAATGGATGGACATGTA
CGGGGTCTTAGAGGCAATCCGATGCTGCATTTTCTCTTTCACCCTAGGTGGATCAGCTAGGGTTTGGTTCCGACAACTAAAGCGAGGGTCGATTTCAAGCTTCAAAAGCT
TGGCCAGGGCGTTTGTAAACCAATTTGTAGGAGGTCAGAATCGGAGTCGGCCAGTGGCGTATCTCTTAACCATTAAAAAGAGCCCGAAGGGAGGTGCGCTACCAAAAAAG
AGAGAAGTCAGGGAAAAGCCCCTAAGCTCGAAGTGGGAGAAGCGAGATCGGGTCGTCGAACAGAAAGATCTACCTCGGAAGTTTGAAAAGTATACTCCGACCACTATTCT
ATTGAAGCAGGATTGCTTTGATCTTAAAGAAGAGGTAGAAGGGCTCATTCGGAAAGGGTACCTCAAAGAATATGTGGATGATCTCAAAGCAACTCCAAATATGGAAAATG
ACAACAAATCCCCTGCCAGAGAAATTCGTACGATCATGGGAGGTTCAACAGAATAG
Protein sequenceShow/hide protein sequence
MGEKVPPKFKLPSLKQFDGTIDPVDHLDAYQEWMDMYGVLEAIRCCIFSFTLGGSARVWFRQLKRGSISSFKSLARAFVNQFVGGQNRSRPVAYLLTIKKSPKGGALPKK
REVREKPLSSKWEKRDRVVEQKDLPRKFEKYTPTTILLKQDCFDLKEEVEGLIRKGYLKEYVDDLKATPNMENDNKSPAREIRTIMGGSTE