; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g28280 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g28280
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUBP1-associated protein 2C-like
Genome locationchr5:20808871..20811298
RNA-Seq ExpressionMoc05g28280
SyntenyMoc05g28280
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017564.1 UBP1-associated protein 2C [Cucurbita argyrosperma subsp. argyrosperma]2.7e-4081.58Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPV-AAGYPQPGKSHGIVAPVGYTY-PQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPT
        GRNIIVKLADSHR+KM+QAQV PAIPSMPYPV AAGYPQPGK HG VAPVGY Y PQA A Y ASYPSPT+AHASYA QPQ+P+PHQ IG K+APGLH T
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPV-AAGYPQPGKSHGIVAPVGYTY-PQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPT

Query:  APAGMGGYPYYMAK
         P GMGGYPYYMAK
Subjt:  APAGMGGYPYYMAK

XP_004136575.1 UBP1-associated protein 2C [Cucumis sativus]2.1e-4585.71Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVSPAIPSMPYPVAAGYPQPGK HG VAPVGY YPQA  +YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
        AGMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

XP_008443071.1 PREDICTED: UBP1-associated protein 2C-like [Cucumis melo]2.1e-4585.71Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVSPAIPSMPYPVAAGYPQPGK HG VAPVGY YPQA  +YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
        AGMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

XP_022159322.1 UBP1-associated protein 2C-like [Momordica charantia]1.0e-55100Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA
        GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA

Query:  GMGGYPYYMAK
        GMGGYPYYMAK
Subjt:  GMGGYPYYMAK

XP_038906210.1 UBP1-associated protein 2C-like [Benincasa hispida]1.3e-4283.93Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVS AIPSMPYPVAAGYPQPGK HG V PVGY YPQA A YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
         GMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

TrEMBL top hitse value%identityAlignment
A0A0A0LEH0 Uncharacterized protein1.0e-4585.71Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVSPAIPSMPYPVAAGYPQPGK HG VAPVGY YPQA  +YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
        AGMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

A0A1S3B7X8 UBP1-associated protein 2C-like1.0e-4585.71Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVSPAIPSMPYPVAAGYPQPGK HG VAPVGY YPQA  +YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
        AGMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

A0A5A7TKB5 UBP1-associated protein 2C-like1.0e-4585.71Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP
        GRNIIVKLADSHR+KM+QAQVSPAIPSMPYPVAAGYPQPGK HG VAPVGY YPQA  +YPASYPSPT AHASYA QPQMPYPHQ IG K+A GLHP  P
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQA-PAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAP

Query:  AGMGGYPYYMAK
        AGMGGYPYYMAK
Subjt:  AGMGGYPYYMAK

A0A6J1DZI6 UBP1-associated protein 2C-like4.9e-56100Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA
        GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPTAPA

Query:  GMGGYPYYMAK
        GMGGYPYYMAK
Subjt:  GMGGYPYYMAK

A0A6J1J4I3 UBP1-associated protein 2C-like1.1e-3981.58Show/hide
Query:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPV-AAGYPQPGKSHGIVAPVGYTY-PQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPT
        GRNIIVKLADSHR+KM+QAQV PAIPSMPYPV AAGYPQPGK HG VAPVGY Y PQA A Y ASYPSPT+AHASYA  PQMP+PHQ IG K+APGLH T
Subjt:  GRNIIVKLADSHRSKMVQAQVSPAIPSMPYPV-AAGYPQPGKSHGIVAPVGYTY-PQAPA-YPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAPGLHPT

Query:  APAGMGGYPYYMAK
         PAGMG YPYYMAK
Subjt:  APAGMGGYPYYMAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACTACTATAATGCATTGCTTTGGATCCTTCGTCATGCTTTTGTGCTCGGGAAGGAACATCATTGTGAAGCTTGCCGATTCCCACAGGAGCAAGATGGTGCAGGC
TCAAGTATCCCCAGCCATTCCTTCCATGCCATATCCAGTAGCAGCGGGATATCCTCAACCCGGAAAATCACACGGCATTGTTGCCCCTGTTGGCTATACTTATCCCCAAG
CTCCTGCATATCCTGCTTCGTATCCTAGTCCTACGGCTGCACACGCTTCGTATGCGGGCCAACCCCAAATGCCATACCCTCATCAAGCGATTGGAGTGAAAGAGGCTCCC
GGACTTCACCCGACTGCACCTGCTGGAATGGGCGGGTATCCATATTACATGGCGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACTACTATAATGCATTGCTTTGGATCCTTCGTCATGCTTTTGTGCTCGGGAAGGAACATCATTGTGAAGCTTGCCGATTCCCACAGGAGCAAGATGGTGCAGGC
TCAAGTATCCCCAGCCATTCCTTCCATGCCATATCCAGTAGCAGCGGGATATCCTCAACCCGGAAAATCACACGGCATTGTTGCCCCTGTTGGCTATACTTATCCCCAAG
CTCCTGCATATCCTGCTTCGTATCCTAGTCCTACGGCTGCACACGCTTCGTATGCGGGCCAACCCCAAATGCCATACCCTCATCAAGCGATTGGAGTGAAAGAGGCTCCC
GGACTTCACCCGACTGCACCTGCTGGAATGGGCGGGTATCCATATTACATGGCGAAATAA
Protein sequenceShow/hide protein sequence
MVTTIMHCFGSFVMLLCSGRNIIVKLADSHRSKMVQAQVSPAIPSMPYPVAAGYPQPGKSHGIVAPVGYTYPQAPAYPASYPSPTAAHASYAGQPQMPYPHQAIGVKEAP
GLHPTAPAGMGGYPYYMAK