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Moc05g29250 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g29250
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr5:21704600..21705968
RNA-Seq ExpressionMoc05g29250
SyntenyMoc05g29250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFA29215.1 pentatricopeptide repeat-containing protein [Tanacetum cinerariifolium]9.2e-0650Show/hide
Query:  PQWMIRDFAPFSSCKLYETLPGHELAPRFLGDAGRVLIRGVRGAAGTMDPLTPNRVAFPGLAGVACRS
        P WM  +  P   C ++       L P F  D        VR AA TMDPLTPN VAFPGLAGVACRS
Subjt:  PQWMIRDFAPFSSCKLYETLPGHELAPRFLGDAGRVLIRGVRGAAGTMDPLTPNRVAFPGLAGVACRS
KAF3773510.1 hypothetical protein EJ110_NYTH47861 [Nymphaea thermarum]4.1e-0682.05Show/hide
Query:  PNFLAEVDLPQAHPMDFADTLRLKASIILES-YLDSVRR
        PNFLAEVDLPQAHPMD ADTLRLKAS+ILES + DS+ R
Subjt:  PNFLAEVDLPQAHPMDFADTLRLKASIILES-YLDSVRR
PWA52990.1 pentatricopeptide repeat-containing protein [Artemisia annua]1.0e-0496.43Show/hide
Query:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
        VR AAGTMDPLTPNRVAFPGLAGVACRS
Subjt:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
TrEMBL top hitse value%identityAlignment
A0A2N9FVS8 Uncharacterized protein6.5e-0592.86Show/hide
Query:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
        VRGAAGTMDPLTPNRVA PGLAGVACR+
Subjt:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
A0A2U1LVG7 Pentatricopeptide repeat-containing protein4.9e-0596.43Show/hide
Query:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
        VR AAGTMDPLTPNRVAFPGLAGVACRS
Subjt:  VRGAAGTMDPLTPNRVAFPGLAGVACRS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAGAAAAATCTTACTCCTCAGTGGATGATTCGTGATTTTGCCCCTTTTTCTAGTTGTAAGCTTTATGAAACGCTTCCTGGACATGAATTGGCTCCACGA
TTCCTTGGTGACGCCGGCCGAGTCCTGATCCGGGGAGTCCGTGGGGCTGCAGGTACTATGGATCCTCTGACTCCCAATCGGGTTGCCTTCCCAGGTCTCGCCGGT
GTTGCCTGTAGGTCGTGCTGTGCCTTGAGATGGCTGTCTCCTGTCCCCGGGAGAAGGTTCTGTTCAGTTTCGGGACTTCTCCTGAAGAATGACCAATGGAACCGA
CCGTATCAAAGTAGTGACCCGAACTTTTTGGCTGAAGTCGACCTGCCACAGGCGCATCCGATGGATTTCGCGGATACTTTGCGCTTAAAGGCTTCTATCATTCTG
GAGTCGTATTTGGATTCCGTAAGGAGACCTCTGACTATAATTGAGAATACGGTGGGCCTCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAGAAAAATCTTACTCCTCAGTGGATGATTCGTGATTTTGCCCCTTTTTCTAGTTGTAAGCTTTATGAAACGCTTCCTGGACATGAATTGGCTCCACGA
TTCCTTGGTGACGCCGGCCGAGTCCTGATCCGGGGAGTCCGTGGGGCTGCAGGTACTATGGATCCTCTGACTCCCAATCGGGTTGCCTTCCCAGGTCTCGCCGGT
GTTGCCTGTAGGTCGTGCTGTGCCTTGAGATGGCTGTCTCCTGTCCCCGGGAGAAGGTTCTGTTCAGTTTCGGGACTTCTCCTGAAGAATGACCAATGGAACCGA
CCGTATCAAAGTAGTGACCCGAACTTTTTGGCTGAAGTCGACCTGCCACAGGCGCATCCGATGGATTTCGCGGATACTTTGCGCTTAAAGGCTTCTATCATTCTG
GAGTCGTATTTGGATTCCGTAAGGAGACCTCTGACTATAATTGAGAATACGGTGGGCCTCTGCTAG
Protein sequenceShow/hide protein sequence
MKQKNLTPQWMIRDFAPFSSCKLYETLPGHELAPRFLGDAGRVLIRGVRGAAGTMDPLTPNRVAFPGLAGVACRSCCALRWLSPVPGRRFCSVSGLLLKNDQWNR
PYQSSDPNFLAEVDLPQAHPMDFADTLRLKASIILESYLDSVRRPLTIIENTVGLC