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Moc05g29310 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g29310
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA polymerase
Genome locationchr5:21713842..21714921
RNA-Seq ExpressionMoc05g29310
SyntenyMoc05g29310
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006351 - transcription, DNA-templated (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79212.1 hypothetical protein VITISV_025938 [Vitis vinifera]5.0e-0590.32Show/hide
Query:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
        SRRFCAINP GRRLVVGGPAEL EKGSLV K
Subjt:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
KAE9444856.1 hypothetical protein C3L33_23246, partial [Rhododendron williamsianum]1.1e-0482.86Show/hide
Query:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
        S K+ LFR RDSLNLLPGKLSSLAKNLCP LG KG
Subjt:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
QVJ97964.1 hypothetical protein [Apium graveolens]1.3e-0593.55Show/hide
Query:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
        SRRFCAINPSGRRLVVGGPAEL EKGSLV K
Subjt:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
XP_017985381.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase-like [Theobroma cacao]8.5e-0584.85Show/hide
Query:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
        K+ LFR RDSLNLLPGKLSSLAKNLCP+LG KG
Subjt:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
XP_039118890.1 LOW QUALITY PROTEIN: DNA polymerase-like [Dioscorea cayenensis subsp. rotundata]1.9e-0482.86Show/hide
Query:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
        S K+ LFR RDSLNLLPGKLSSLA NLCPELG KG
Subjt:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
TrEMBL top hitse value%identityAlignment
A0A2G2UXT5 DNA-directed DNA polymerase1.2e-0455.56Show/hide
Query:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
        K+ LFRLRDSL LLPGKL +LAKNLCP+LG K      G +  SE    Y+ P+
Subjt:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
A0A2G2V2F5 DNA-directed DNA polymerase1.2e-0455.56Show/hide
Query:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
        K+ LFRLRDSL LLPGKL +LAKNLCP+LG K      G +  SE    Y+ P+
Subjt:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
A0A2G2WY57 DNA-directed DNA polymerase1.2e-0455.56Show/hide
Query:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
        K+ LFRLRDSL LLPGKL +LAKNLCP+LG K      G +  SE    Y+ P+
Subjt:  KQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPS
A0A6A4K4S7 DNA polymerase (Fragment)5.3e-0582.86Show/hide
Query:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
        S K+ LFR RDSLNLLPGKLSSLAKNLCP LG KG
Subjt:  SRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKG
A5BQS0 Uncharacterized protein2.4e-0590.32Show/hide
Query:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
        SRRFCAINP GRRLVVGGPAEL EKGSLV K
Subjt:  SRRFCAINPSGRRLVVGGPAELLEKGSLVTK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGCGAGGTGCCTGCGTTGCTAGATCTCTGCTCTAGAAAGCTATACAGGCAACAACAAAGGCGGCCTAGTTCAGGGCAAAGATTCTTAGCTAGTGAGCTA
AGTTTGCCGGGGAGAAGATTCAAGGAGTCTCGTAAGCAGAATCTATTCCGCTTACGAGACTCCTTGAATCTTCTCCCCGGCAAACTTAGCTCACTAGCTAAGAAT
CTTTGCCCTGAACTAGGCCTGAAAGGCCTCCCAAAAGGTAACGGGGGCATGCAAAGGTCTGAAGCTCTGAGGAAATACATTGAACCGTCTTGCTCCCGGCGTTTT
TGTGCAATAAACCCCTCCGGCCGCAGACTAGTGGTAGGTGGTCCCGCGGAGCTTTTGGAGAAGGGTAGCCTAGTGACGAAAGGCTACTTCAATCTAGGAAACCGC
CGGAAACTCGAGAGGGTCGCCTTTGGAAGCGTTCGCCGGGGACCTCCGGCAGCGCTGCGCCTCTTGAAAGGCGCTCAAAAAGGGGGCCGGCTTTTTAAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGCGAGGTGCCTGCGTTGCTAGATCTCTGCTCTAGAAAGCTATACAGGCAACAACAAAGGCGGCCTAGTTCAGGGCAAAGATTCTTAGCTAGTGAGCTA
AGTTTGCCGGGGAGAAGATTCAAGGAGTCTCGTAAGCAGAATCTATTCCGCTTACGAGACTCCTTGAATCTTCTCCCCGGCAAACTTAGCTCACTAGCTAAGAAT
CTTTGCCCTGAACTAGGCCTGAAAGGCCTCCCAAAAGGTAACGGGGGCATGCAAAGGTCTGAAGCTCTGAGGAAATACATTGAACCGTCTTGCTCCCGGCGTTTT
TGTGCAATAAACCCCTCCGGCCGCAGACTAGTGGTAGGTGGTCCCGCGGAGCTTTTGGAGAAGGGTAGCCTAGTGACGAAAGGCTACTTCAATCTAGGAAACCGC
CGGAAACTCGAGAGGGTCGCCTTTGGAAGCGTTCGCCGGGGACCTCCGGCAGCGCTGCGCCTCTTGAAAGGCGCTCAAAAAGGGGGCCGGCTTTTTAAAGCTTAG
Protein sequenceShow/hide protein sequence
MLGEVPALLDLCSRKLYRQQQRRPSSGQRFLASELSLPGRRFKESRKQNLFRLRDSLNLLPGKLSSLAKNLCPELGLKGLPKGNGGMQRSEALRKYIEPSCSRRF
CAINPSGRRLVVGGPAELLEKGSLVTKGYFNLGNRRKLERVAFGSVRRGPPAALRLLKGAQKGGRLFKA