CuGenDBv2

Gene ID	Moc05g30280
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein YIP
Genome location	chr5:22542706..22545184
RNA-Seq Expression	Moc05g30280
Synteny	Moc05g30280
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0010506 - regulation of autophagy (biological process) GO:0048280 - vesicle fusion with Golgi apparatus (biological process) GO:0005802 - trans-Golgi network (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031902 - late endosome membrane (cellular component) GO:0035658 - Mon1-Ccz1 complex (cellular component)
InterPro domains	IPR006977 - Yip1 domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596564.1 Protein YIPF5, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-123

96.62

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
        MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS  IYGG I GGS+PGGANFEDEEPLLDELGIHPDQIWKKT
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
        KSILNPFRV+PDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ GI
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI

Query:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAK
        +RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAK
Subjt:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAK

KGN59279.2 hypothetical protein Csa_001750 [Cucumis sativus]

2.4e-123

91.57

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK
        MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTSS  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKK
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK

Query:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG
        TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ G
Subjt:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAKFLISHISLVRDQLVFLLN-CLLV
        +VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA FL+    + R Q    +N CLLV
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIAKFLISHISLVRDQLVFLLN-CLLV

XP_004153735.2 protein YIPF5 homolog [Cucumis sativus]

3.2e-123

97.05

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK
        MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTSS  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKK
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK

Query:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG
        TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ G
Subjt:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        +VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

XP_022144590.1 protein YIPF5 homolog isoform X1 [Momordica charantia]

2.8e-127

100

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
        MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
        KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI

Query:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

XP_022983078.1 protein YIPF5 homolog isoform X1 [Cucurbita maxima]

3.2e-123

96.61

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
        MGTVKKEFAVPPVVFPSGGNPNL QR VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS GIYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKT
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
        KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVV SAVSLFLPQ GI
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI

Query:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        +RF VAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM5 Protein YIP

1.5e-123

97.05

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK
        MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTSS  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKK
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK

Query:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG
        TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ G
Subjt:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        +VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

A0A1S3B7C5 Protein YIP

3.4e-123

96.62

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK
        MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTSS  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKK
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK

Query:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG
        TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ G
Subjt:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        ++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

A0A5D3DNR0 Protein YIP

3.4e-123

96.62

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK
        MGTVKKEFAVPPVVFPSGGNPNLQQRR VATAPFQPPR TGSSIPFMSFDIGSAAAASTSS  IYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKK
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRR-VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKK

Query:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG
        TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ G
Subjt:  TKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        ++RFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

A0A6J1CU38 Protein YIP

1.3e-127

100

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
        MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
        KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI

Query:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

A0A6J1J6R1 Protein YIP

1.5e-123

96.61

Show/hide

Query:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT
        MGTVKKEFAVPPVVFPSGGNPNL QR VATAPFQPPRSTGSSIPFMSFDIGSAAAASTSS GIYGGPIGGGS+PGGANFEDEEPLLDELGIHPDQIWKKT
Subjt:  MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI
        KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVV SAVSLFLPQ GI
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGI

Query:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
        +RF VAGVFVLWATRICTSLMVSLADGGDEHRGLIA
Subjt:  VRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

SwissProt top hits

e value

%identity

Alignment

Q54QY3 Protein YIPF5 homolog

1.9e-22

37.04

Show/hide

Query:  GPIGGGSLPGGA--NFEDEEPLLDELGIHPDQIWKKTKSILNPF-RVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNML
        G +GGG   GG   +F++E PLL+ELGI+ D I  KT S+LNP  ++   +  D+DL GPIL  +  G   L++GKIQFG I G  ++  + +Y+V N++
Subjt:  GPIGGGSLPGGA--NFEDEEPLLDELGIHPDQIWKKTKSILNPF-RVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNML

Query:  AGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSL
        + +   ++++   SV+GYC+LP++ LS  SL +   G+V + + G  ++W+T   + + V +
Subjt:  AGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVSL

Q5E9E8 Protein YIPF5

8.9e-20

34.23

Show/hide

Query:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC
        G NFEDE PLL+ELGI+ D IW+KT ++L+P +V    +  ++DL+GP++  + FG   LLAGKIQFG + G   +  + ++ + N+++     ++    
Subjt:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC

Query:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS
         SV+GYC+LP+++LS+ ++     G+V   +    + W +   + + +S
Subjt:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS

Q66KA5 Protein YIPF5

4.7e-21

34.23

Show/hide

Query:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC
        G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V   ++  ++DL+GP++  + FG   LLAGKIQFG + G   +  + +Y + N+++     ++    
Subjt:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC

Query:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS
        +SV+GYC+LP+++LS+ ++     GI+   +A + + W +   + + +S
Subjt:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS

Q7SXS2 Protein YIPF5

1.4e-20

34.23

Show/hide

Query:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC
        G+ F+DE PLL+ELGI+ D IW+KT ++L+P +V    +  ++DL+GP++  + FG   LLAGKIQFG + G   +  + +Y + N+++     ++    
Subjt:  GANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVKP-DVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTC

Query:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS
        +SV+GYC+LP+++LS  ++     GI+   +A + + W +   + + +S
Subjt:  TSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS

Q8N8F6 Protein YIPF7

1.1e-20

34.69

Show/hide

Query:  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS
        +F++E PLL+ELGIH D IW+KT ++LNP + V   +  ++DL+GPIL  +  G   LLAGK+QFG + G   +  + ++ + N+++  +  ++     S
Subjt:  NFEDEEPLLDELGIHPDQIWKKTKSILNPFR-VKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS

Query:  VVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS
        V+GYC+LP+V+LS  ++F    GI     + V + W +   + + ++
Subjt:  VVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSLMVS

Arabidopsis top hits

e value

%identity

Alignment

AT2G36300.1 Integral membrane Yip1 family protein

2.3e-95

76.37

Show/hide

Query:  KEFAVPPVVFPSGGN---PNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGG--ANFEDEEPLLDELGIHPDQIWKKT
        K+FAVPPVVFPSGG+    N+QQRR    PFQPPR + S+IPFMSFDIGSAAA+S + AG +GG I   S  GG  A+FEDEEPLLDELGIHPDQIWKKT
Subjt:  KEFAVPPVVFPSGGN---PNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGG--ANFEDEEPLLDELGIHPDQIWKKT

Query:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ-TG
        +SILNPFR+   VHKDSDLSGPI LY+   LFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTS+VGYC+LPVVVLSAVSLF+PQ  G
Subjt:  KSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQ-TG

Query:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA
         VRF +A +FVLW+TR C++L+VSLADGG+EHRGLIA
Subjt:  IVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLIA

AT3G52760.1 Integral membrane Yip1 family protein

4.3e-86

69.64

Show/hide

Query:  KEFAVPPVVFPSGGN----PNLQQRRVATAPFQPPR--STGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPG---GANFEDEEPLLDELGIHPDQI
        K+F +PPVVFP+ G+     N+QQRRV TAP+QPPR  S  SSIPF+ F+IGSAA   +  AG + G I   +  G    A+FEDEEPLLDELGIHPDQI
Subjt:  KEFAVPPVVFPSGGN----PNLQQRRVATAPFQPPR--STGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPG---GANFEDEEPLLDELGIHPDQI

Query:  WKKTKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLP
        WKKT+SILNPFR+   VHKDSDLSGPI LY+   LFQLLAGKIQFGVILGW+VVSSIFLY+VFNMLAGRNGNLNLHTCTS+VGY +LPVV+LSAVSLF+P
Subjt:  WKKTKSILNPFRVKPDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLP

Query:  Q-TGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLI--AKFLI
        Q  G VRF +   FVLWATR C++L+VSLADGG+EHRGLI  A FLI
Subjt:  Q-TGIVRFAVAGVFVLWATRICTSLMVSLADGGDEHRGLI--AKFLI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGACGGTGAAGAAGGAGTTCGCTGTACCGCCGGTGGTTTTCCCATCGGGCGGTAACCCCAATCTTCAGCAAAGGCGGGTGGCCACGGCGCCGTTTCAGCCTCCTCG
GTCGACTGGCTCCAGTATTCCGTTCATGTCCTTCGACATCGGATCCGCCGCCGCTGCTTCCACCTCCTCCGCCGGCATCTACGGTGGTCCTATCGGTGGTGGGTCTCTCC
CTGGCGGCGCTAATTTCGAAGACGAAGAACCACTCCTCGATGAGCTCGGGATCCACCCGGATCAAATCTGGAAGAAAACTAAGTCGATCCTGAATCCGTTCCGGGTCAAA
CCAGATGTGCACAAGGACTCGGACTTGTCCGGACCGATTCTCCTTTACATGTTCTTCGGCCTCTTTCAGTTGCTCGCCGGCAAGATCCAATTTGGGGTGATACTGGGATG
GATCGTGGTTTCTTCGATCTTCTTGTACGTTGTGTTCAATATGTTGGCTGGACGAAATGGCAATTTGAACCTTCACACATGCACTAGCGTTGTTGGGTACTGTATGTTGC
CCGTCGTGGTTTTGTCGGCGGTGTCCTTGTTCCTTCCGCAGACGGGCATAGTGAGATTCGCAGTCGCCGGAGTTTTTGTGTTGTGGGCGACGAGGATTTGTACGAGTCTT
ATGGTTTCTCTTGCTGATGGTGGGGATGAGCACCGTGGGTTGATAGCGAAGTTCCTCATTTCTCATATTAGTCTTGTAAGAGATCAGCTAGTTTTCTTGTTGAACTGTTT
ACTGGTAGGTGTTGAGTGGCTGGTGTTCGATCCGCAAGATGAACTCTCTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGTVKKEFAVPPVVFPSGGNPNLQQRRVATAPFQPPRSTGSSIPFMSFDIGSAAAASTSSAGIYGGPIGGGSLPGGANFEDEEPLLDELGIHPDQIWKKTKSILNPFRVK
PDVHKDSDLSGPILLYMFFGLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRNGNLNLHTCTSVVGYCMLPVVVLSAVSLFLPQTGIVRFAVAGVFVLWATRICTSL
MVSLADGGDEHRGLIAKFLISHISLVRDQLVFLLNCLLVGVEWLVFDPQDELS

Moc05g30280 (gene) of Bitter gourd (OHB3-1) v2 genome