; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc05g30990 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc05g30990
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionsplicing factor 3A subunit 2
Genome locationchr5:23257961..23260571
RNA-Seq ExpressionMoc05g30990
SyntenyMoc05g30990
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043971.1 splicing factor 3A subunit 2 [Cucumis melo var. makuwa]6.1e-16993.16Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGT
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG 
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGT

Query:  PSIPPPPPVGNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        P IPPPPPVGNNTM NF   TQMNRPPMPPPPQ F GQG+RQPPPPPPNMG
Subjt:  PSIPPPPPVGNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]4.6e-17295.61Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQGF GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]7.8e-17295.91Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPPV
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQ F GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

XP_022144784.1 splicing factor 3A subunit 2 [Momordica charantia]8.3e-182100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG
        SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG

Query:  NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
Subjt:  NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

XP_038905938.1 splicing factor 3A subunit 2 [Benincasa hispida]1.0e-17195.61Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAP-PPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRP+PPPPQAP PPPPPPQQG PPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPPV
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAP-PPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQGF GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein2.2e-17295.61Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPP+
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQGF GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 23.8e-17295.91Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPPV
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQ F GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

A0A5A7TQW8 Splicing factor 3A subunit 23.0e-16993.16Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
        KVSVRKT          KIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP
Subjt:  KVSVRKT---------VKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTP

Query:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGT
        KFFSHWDPDSKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG 
Subjt:  KFFSHWDPDSKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGT

Query:  PSIPPPPPVGNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        P IPPPPPVGNNTM NF   TQMNRPPMPPPPQ F GQG+RQPPPPPPNMG
Subjt:  PSIPPPPPVGNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 23.8e-17295.91Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV
        SKMFTLQLYFKSKPQEANKP  VPAANGTVPSGAPPRPLPPPPQA PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVM+NGPPRPM PPGG P IPPPPPV
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQA-PPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPV

Query:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        GNNTM NF   TQMNRPPMPPPPQ F GQG+RQPPPPPPNMG
Subjt:  GNNTMENF---TQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

A0A6J1CTB1 splicing factor 3A subunit 24.0e-182100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG
        SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVG

Query:  NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
        NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG
Subjt:  NNTMENFTQMNRPPMPPPPQGFQGQGVRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 22.0e-7756.23Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSK--PQEANKPQTVPAANGTVP---SGAPPRP-----LPPPPQA--PPPPPPPQQGAPPRVP-----PPPMPGSLPPPPSVMSNGPPRPMPPPG
        LQ +FK +  P   + P   P      P   +G PPRP     LPPPP    P PP PP   AP   P     PPP PG  PP P V         P PG
Subjt:  LQLYFKSK--PQEANKPQTVPAANGTVP---SGAPPRP-----LPPPPQA--PPPPPPPQQGAPPRVP-----PPPMPGSLPPPPSVMSNGPPRPMPPPG

Query:  GTPSIP---PPPPVGNNTMENFTQMNRPPMP---PPPQGFQ--GQGVRQPPP---PPPNMG
          P  P   PP PV +           PP P   PP  G      GV  P P   PPP+ G
Subjt:  GTPSIP---PPPPVGNNTMENFTQMNRPPMP---PPPQGFQ--GQGVRQPPP---PPPNMG

Q15428 Splicing factor 3A subunit 21.9e-8058.43Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME
        LQ +FK +          P A  ++P+G        PP    PPPP   G PPR   PP+P SLPPPP      P  PMPP G  PS PP PP     + 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME

Query:  NFTQMNRPPMP---PPPQGFQGQGVRQPPPPP
               PP P   PP  G         PP P
Subjt:  NFTQMNRPPMP---PPPQGFQGQGVRQPPPPP

Q54B65 Splicing factor 3A subunit 27.8e-6661.21Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW
        +V  +KT+KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T    KFF+HW
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW

Query:  DPDSKMFTLQLYFK
        D  +K FTLQLYFK
Subjt:  DPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 22.7e-7456.76Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF          F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME
        LQ +FK +          P A  ++P+G        PP    PPPP   G PPR   PP+P +LPPPP      P  PMPP G  PS PP PP     M 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME

Query:  NFTQMNRPPMP---PPPQGFQ--GQGVRQPPP--PPPNMG
               PP P   PP  G      GV  P P   PP  G
Subjt:  NFTQMNRPPMP---PPPQGFQ--GQGVRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 22.5e-8057.94Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME
        LQ +FK +          P A  ++P+G        PP    PPPP   G PPR   PP+P +LPPPP      P  PMPP G  PS PP PP     M 
Subjt:  LQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTME

Query:  NFTQMNRPPMP---PPPQGFQ--GQGVRQPPP--PPPNMG
               PP P   PP  G      GV  P P   PP  G
Subjt:  NFTQMNRPPMP---PPPQGFQ--GQGVRQPPP--PPPNMG

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein1.5e-11779.58Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
         VSVR+TVKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGG
        SKMFTLQ+YFK    E NKPQ+   ANG          LP     PPPPPPP Q  P   PPPP  G  PPPP  M+N   RPMPP GG
Subjt:  SKMFTLQLYFKSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGG

AT5G07740.1 actin binding3.9e-0445.04Show/hide
Query:  ANKPQTVPAANGTVPSGAPPRPL----PPPPQAP------PPPPPPQQGAPPRVPPPPMPGSL-PPPPSVMSNGPPRPMPPP--GGTPSIPPPPPVGNNT
        A  P   P  +G  P   PP P+    PPPP  P      PPPPPP +G  P  PPPPM G   PPPP  M  G P P PPP  GG P  PPPP  G   
Subjt:  ANKPQTVPAANGTVPSGAPPRPL----PPPPQAP------PPPPPPQQGAPPRVPPPPMPGSL-PPPPSVMSNGPPRPMPPP--GGTPSIPPPPPVGNNT

Query:  MENFTQMNRPPMPPPPQGFQGQGVRQPPPPP
                  P PPPP G +G G   PPPPP
Subjt:  MENFTQMNRPPMPPPPQGFQGQGVRQPPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGAGTGGGGCTCGAAGCCGGGAAGTGGAGGTGCGGCCTCTGCACAGAATGAAGCTATTGATCGGAGAGAGCGTCTTCGGCGGCTTGCTCTCGAGACC
ATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTACTTGGCGCAC
ACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCAGCCCGCGAAGCCAAGGAAGCTCCTGCTCAACCTCAGCCCCACAAGCGGAAGGTCTCTGTTCGT
AAAACAGTTAAAATTGGAAGGCCTGGTTATAGAGTCACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAGATTGAATATCCAGAAATTGAA
GACCTAGCAAAGCCAAGGCATCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCCTTTGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAG
ATAATTGCGTTCAAGGTTCCAAGCACAGAGATTGACAAATCTACACCAAAATTCTTCTCACACTGGGATCCTGACTCAAAAATGTTCACGTTGCAGTTGTATTTC
AAATCCAAGCCACAAGAGGCAAACAAGCCACAGACTGTGCCTGCAGCCAATGGAACGGTGCCATCTGGTGCACCACCGAGGCCACTTCCCCCGCCACCTCAAGCT
CCACCACCACCACCTCCACCACAGCAAGGAGCGCCACCGAGAGTTCCTCCTCCTCCAATGCCGGGCTCCTTGCCGCCTCCCCCTTCTGTAATGTCTAATGGTCCT
CCCAGACCAATGCCTCCTCCCGGTGGGACTCCGTCGATCCCTCCACCGCCTCCAGTTGGCAATAACACAATGGAAAATTTCACTCAGATGAATAGACCTCCCATG
CCACCTCCTCCACAGGGCTTCCAAGGTCAGGGTGTTCGTCAGCCACCACCGCCGCCACCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAGAGTGGGGCTCGAAGCCGGGAAGTGGAGGTGCGGCCTCTGCACAGAATGAAGCTATTGATCGGAGAGAGCGTCTTCGGCGGCTTGCTCTCGAGACC
ATCGATCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAACAATGAGGGAAATTACTTGGCGCAC
ACGCAGGGGAAGCGGCATCAGACTAATTTGGCCAAGAGAGCAGCCCGCGAAGCCAAGGAAGCTCCTGCTCAACCTCAGCCCCACAAGCGGAAGGTCTCTGTTCGT
AAAACAGTTAAAATTGGAAGGCCTGGTTATAGAGTCACAAAGCAATTTGATTCTGAGACAAAGCAGAGATCTCTGCTTTTCCAGATTGAATATCCAGAAATTGAA
GACCTAGCAAAGCCAAGGCATCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCCTTTGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCATATGAG
ATAATTGCGTTCAAGGTTCCAAGCACAGAGATTGACAAATCTACACCAAAATTCTTCTCACACTGGGATCCTGACTCAAAAATGTTCACGTTGCAGTTGTATTTC
AAATCCAAGCCACAAGAGGCAAACAAGCCACAGACTGTGCCTGCAGCCAATGGAACGGTGCCATCTGGTGCACCACCGAGGCCACTTCCCCCGCCACCTCAAGCT
CCACCACCACCACCTCCACCACAGCAAGGAGCGCCACCGAGAGTTCCTCCTCCTCCAATGCCGGGCTCCTTGCCGCCTCCCCCTTCTGTAATGTCTAATGGTCCT
CCCAGACCAATGCCTCCTCCCGGTGGGACTCCGTCGATCCCTCCACCGCCTCCAGTTGGCAATAACACAATGGAAAATTTCACTCAGATGAATAGACCTCCCATG
CCACCTCCTCCACAGGGCTTCCAAGGTCAGGGTGTTCGTCAGCCACCACCGCCGCCACCCAATATGGGATAG
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYF
KSKPQEANKPQTVPAANGTVPSGAPPRPLPPPPQAPPPPPPPQQGAPPRVPPPPMPGSLPPPPSVMSNGPPRPMPPPGGTPSIPPPPPVGNNTMENFTQMNRPPM
PPPPQGFQGQGVRQPPPPPPNMG