; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g00550 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g00550
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMYND-type domain-containing protein
Genome locationchr6:356618..360121
RNA-Seq ExpressionMoc06g00550
SyntenyMoc06g00550
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR002893 - Zinc finger, MYND-type
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR012337 - Ribonuclease H-like superfamily
IPR036047 - F-box-like domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR044508 - F-box protein At5g50450/At1g67340-like
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589385.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-16284.01Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

KAG7023063.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-16284.01Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

XP_022921747.1 F-box protein At1g67340-like [Cucurbita moschata]1.3e-16284.3Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

XP_022987090.1 F-box protein At1g67340-like [Cucurbita maxima]2.3e-15982.56Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        M  +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRC +AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCL NRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER    R GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQ+QDWK+RHK  C  +++W++ E +N  G +F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

XP_023516460.1 F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]3.4e-16384.3Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

TrEMBL top hitse value%identityAlignment
A0A1S3CLL0 F-box protein At1g67340-like1.9e-15981.69Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL
        NYCSRGCQAQDWK+RHK  C  +++WR+E  N+ G +F +VEE+
Subjt:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL

A0A5A7UPI5 F-box protein3.2e-15981.69Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL RLA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL
        NYCSRGCQAQDWK+RHK  C  +++WR+E  N+   +F +VEE+
Subjt:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL

A0A5D3BGS7 F-box protein1.9e-15981.69Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI  KRPRT R   ADSDLFDVLPDDLLIHLL  LA+SASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ +NWC+S+HRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVR+N+DEGRRLL+QAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV
        AREL++VL+SSS + QQ+ H   G L DLTA T C LLSDFGCN+PAPEPHPVNLFLREWFE+E    AR GLRLCSH+GCGR ETRP EFRRCSVCGTV
Subjt:  ARELSSVLISSSRVCQQRHH---GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTV

Query:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL
        NYCSRGCQAQDWK+RHK  C  +++WR+E  N+ G +F +VEE+
Subjt:  NYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEEL

A0A6J1E1B7 F-box protein At1g67340-like6.2e-16384.3Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        MI +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLN LLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRCV+AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER   AR GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQAQDWK+RHK  C  +++W++ E +N  GG+F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

A0A6J1JFU9 F-box protein At1g67340-like1.1e-15982.56Show/hide
Query:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS
        M  +KRPRTCR  AA+SDLFDVLPDDLLIHLL RLASSASSPSDLLNLLLTCKRLNRL LHPLVLSKAGPKAFAV+ E WC+SAHRFLKRC +AGNSEAS
Subjt:  MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEAS

Query:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN
        YTLGMIRFYCL NRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRN+DEGRRLLIQAN
Subjt:  YTLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQAN

Query:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN
        AREL++VL+SSSRV QQRHH  G L DLTA T C LLSDFGC+ PA EPHPVNLFLREWFE+ER    R GLRLCSH GCGRPETRP EFRRCS+CGTVN
Subjt:  ARELSSVLISSSRVCQQRHH--GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVN

Query:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL
        YCSRGCQ+QDWK+RHK  C  +++W++ E +N  G +F  VEE+
Subjt:  YCSRGCQAQDWKLRHKVGCRPIEQWRN-EAENDPGGVFAMVEEL

SwissProt top hitse value%identityAlignment
Q03162 MYND-type zinc finger protein MUB11.0e-0534.67Show/hide
Query:  GLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEELSL
        G+R C++  CG+ E  PR+F +C  C    YCSR CQ + W   H+  C  +      + N   GV    E  SL
Subjt:  GLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEELSL

Q09415 SET domain-containing protein 147.9e-0635.63Show/hide
Query:  CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEELSLRVRRG--SSIKAYSDPWLSRS
        C +  T   E ++CS C  + YCS+ CQ  DWKL HKV C+ I+   NE  ND      +V  ++ ++ R     I+AY  P ++R+
Subjt:  CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAENDPGGVFAMVEELSLRVRRG--SSIKAYSDPWLSRS

Q9FK27 F-box protein At5g504506.9e-11166.45Show/hide
Query:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS
        F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  E W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGAS
Subjt:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS

Query:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH
        LMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQANAREL+  L S   +     
Subjt:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH

Query:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP
        +  L DL+              +P  E HPVN FL+EWF + R  +A +GLR+CSH GCGRPETR  EFRRCSVCG VNYCSRGCQA DW+ +HKV C P
Subjt:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP

Query:  IEQW
        ++ W
Subjt:  IEQW

Q9FYF9 F-box protein At1g673408.7e-12265.63Show/hide
Query:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS
        +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK  NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+
Subjt:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS

Query:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S
        GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L+QANAREL++VL S     S
Subjt:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S

Query:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL
        + +   +    ++      +C LLSDFGCN+PAPE HP N FL +WF          GLRLCSHAGCGRPETR  EFRRCSVCG VNYCSR CQA DWKL
Subjt:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL

Query:  RHKVGCRPIEQWRNEAENDPGGV
        RHK+ C P+++W  E +   G V
Subjt:  RHKVGCRPIEQWRNEAENDPGGV

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 157.6e-0443.59Show/hide
Query:  RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE
        RCS C +V YCS  CQ   W++ HK  C P+E   + +E
Subjt:  RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE

AT1G17110.2 ubiquitin-specific protease 157.6e-0443.59Show/hide
Query:  RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE
        RCS C +V YCS  CQ   W++ HK  C P+E   + +E
Subjt:  RCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAE

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger6.2e-12365.63Show/hide
Query:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS
        +DL D +PDDL+I +L +L S++  P+D +N+LLTCKRL  LA++P+VLS+  PKA AVK  NW E +HRFLKRCV+AG+ EA YTLGMIRFYCL+NRG+
Subjt:  SDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGS

Query:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S
        GASLMAKAAI SHAPALYSLAVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV +N  EGRR L+QANAREL++VL S     S
Subjt:  GASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLIS-----S

Query:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL
        + +   +    ++      +C LLSDFGCN+PAPE HP N FL +WF          GLRLCSHAGCGRPETR  EFRRCSVCG VNYCSR CQA DWKL
Subjt:  SRVCQQRHHGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKL

Query:  RHKVGCRPIEQWRNEAENDPGGV
        RHK+ C P+++W  E +   G V
Subjt:  RHKVGCRPIEQWRNEAENDPGGV

AT2G24640.1 ubiquitin-specific protease 192.0e-0443.9Show/hide
Query:  CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCR
        CG+  T     ++CS C +V YCS  CQ  DWK  HK+ C+
Subjt:  CGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCR

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger4.9e-11266.45Show/hide
Query:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS
        F+ L DDL+I +LR+LA+SASSPSD L +L TCKRLNRL LHPLVLSKAG +  AV  E W +S+H+FLK CV AGN +ASY+LGMIRFYCL+N  SGAS
Subjt:  FDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYCLRNRGSGAS

Query:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH
        LMAKAAIKSHAPALYSL+VIQFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV R+  EGRRLLIQANAREL+  L S   +     
Subjt:  LMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRH

Query:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP
        +  L DL+              +P  E HPVN FL+EWF + R  +A +GLR+CSH GCGRPETR  EFRRCSVCG VNYCSRGCQA DW+ +HKV C P
Subjt:  HGGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRP

Query:  IEQW
        ++ W
Subjt:  IEQW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTC
CTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCCTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTG
CAGTTAAAACCGAAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCAGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGC
TTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTC
TAAGAGCGACAAGGACCTCCAAGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACG
GCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCAC
GGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTG
GTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCGCGAGTTCCGACGGTGCTCGGTCT
GCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGGCTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGAT
CCCGGCGGCGTATTTGCTATGGTAGAAGAATTGAGCCTTCGGGTTAGAAGGGGATCATCTATCAAGGCTTATTCTGACCCATGGCTTTCAAGATCCAATTCTTTTCTACA
TGGAAAGCAAATTTCTCCTCTTGTCATGAGAGGCGAATGGATTCTAAATTACTTCAACCAATATGAACAAGCTAGGATTAAGTCACATACCGCTAACAGGAGTACCGCTA
CTTCTCAAGCCCATCAGCAATGGAGACCTCCAGCAGAAAATTCCTTTAAATTGAACACGGACGTGGCTTGTAGACCAAATTTATCTTCCATCGGGGCTGTGCTTCGTGAT
TCAAATGGTTTCCTTGTTGCGGCAACAATGATTCAACATCCTTCTCCCCTGCCTCCTCTGTTGACGGAAATTTGGGGAATTTTGGAAGCCATAAAATTCGCTGCAGCGGT
GAACTGCACCCATTTGAAAGTGGAATCTGATTCCCTTGAAGCTATTCGGTTGATCAAGAGAAGAAATATCCACCATGGGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCCTCCAAGAGGCCAAGAACATGCCGGAAACCCGCCGCAGATTCCGATCTCTTCGATGTCTTGCCGGACGATCTCCTAATTCACCTCCTCCGCCGCCTCGCCTC
CTCCGCCTCCTCCCCTTCCGACCTCCTCAATCTTCTGTTAACATGCAAGAGGTTGAATCGCCTGGCTCTTCATCCTTTGGTGTTGTCTAAAGCCGGACCGAAAGCGTTTG
CAGTTAAAACCGAAAACTGGTGCGAGTCCGCTCACCGATTCCTCAAACGCTGCGTTGAAGCCGGCAACTCAGAAGCAAGTTACACGCTCGGAATGATCCGATTTTATTGC
TTGAGAAATCGAGGGAGTGGAGCTTCTTTAATGGCGAAAGCAGCCATCAAATCTCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGCGGCTC
TAAGAGCGACAAGGACCTCCAAGCCGGAGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCGCTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACG
GCGTGCGCCGAAACACCGACGAAGGCCGCCGCCTGCTGATCCAAGCCAACGCCCGTGAGCTTTCTTCCGTCCTAATCTCCTCCTCCAGGGTATGCCAGCAGCGCCACCAC
GGCGGCCTTCTCGATTTGACAGCCAGTACAAGTTGTTTGTTGCTGAGTGATTTCGGCTGTAACATTCCGGCGCCGGAGCCACATCCGGTGAACTTGTTTTTGAGAGAGTG
GTTTGAGACGGAACGTCGAGCGATGGCGCGTCAGGGGCTGAGACTCTGCTCGCACGCCGGATGCGGCCGGCCGGAGACTCGACCGCGCGAGTTCCGACGGTGCTCGGTCT
GCGGCACGGTGAATTATTGTTCTCGAGGATGCCAGGCGCAGGATTGGAAACTCCGCCATAAGGTGGGCTGCAGACCAATTGAGCAGTGGCGAAATGAGGCTGAGAACGAT
CCCGGCGGCGTATTTGCTATGGTAGAAGAATTGAGCCTTCGGGTTAGAAGGGGATCATCTATCAAGGCTTATTCTGACCCATGGCTTTCAAGATCCAATTCTTTTCTACA
TGGAAAGCAAATTTCTCCTCTTGTCATGAGAGGCGAATGGATTCTAAATTACTTCAACCAATATGAACAAGCTAGGATTAAGTCACATACCGCTAACAGGAGTACCGCTA
CTTCTCAAGCCCATCAGCAATGGAGACCTCCAGCAGAAAATTCCTTTAAATTGAACACGGACGTGGCTTGTAGACCAAATTTATCTTCCATCGGGGCTGTGCTTCGTGAT
TCAAATGGTTTCCTTGTTGCGGCAACAATGATTCAACATCCTTCTCCCCTGCCTCCTCTGTTGACGGAAATTTGGGGAATTTTGGAAGCCATAAAATTCGCTGCAGCGGT
GAACTGCACCCATTTGAAAGTGGAATCTGATTCCCTTGAAGCTATTCGGTTGATCAAGAGAAGAAATATCCACCATGGGAGGTGA
Protein sequenceShow/hide protein sequence
MIPSKRPRTCRKPAADSDLFDVLPDDLLIHLLRRLASSASSPSDLLNLLLTCKRLNRLALHPLVLSKAGPKAFAVKTENWCESAHRFLKRCVEAGNSEASYTLGMIRFYC
LRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRRNTDEGRRLLIQANARELSSVLISSSRVCQQRHH
GGLLDLTASTSCLLLSDFGCNIPAPEPHPVNLFLREWFETERRAMARQGLRLCSHAGCGRPETRPREFRRCSVCGTVNYCSRGCQAQDWKLRHKVGCRPIEQWRNEAEND
PGGVFAMVEELSLRVRRGSSIKAYSDPWLSRSNSFLHGKQISPLVMRGEWILNYFNQYEQARIKSHTANRSTATSQAHQQWRPPAENSFKLNTDVACRPNLSSIGAVLRD
SNGFLVAATMIQHPSPLPPLLTEIWGILEAIKFAAAVNCTHLKVESDSLEAIRLIKRRNIHHGR