; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g02290 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g02290
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHNH domain-containing protein
Genome locationchr6:1585410..1587860
RNA-Seq ExpressionMoc06g02290
SyntenyMoc06g02290
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002711 - HNH endonuclease
IPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138170.1 uncharacterized protein LOC101222461 [Cucumis sativus]1.0e-9487Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR +KESKKKTRPSSPLRDRTG+    ESR  GS PS+++PS+SL +RDLVTG+  LL DLK SPDDSVS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

XP_008453210.1 PREDICTED: uncharacterized protein LOC103493997 [Cucumis melo]2.3e-9487Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR +KESKKKTRPSSPLRDRTGA    ES R GS PS+++PS+SL +RDLVTG+  LL DLK SP+DSVS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

XP_022135472.1 uncharacterized protein LOC111007422 [Momordica charantia]3.8e-110100Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

XP_022972967.1 uncharacterized protein LOC111471489 [Cucurbita maxima]5.9e-9587.5Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR++KESKKKTRPSSPLRDRT  S RFESRR+GS  S ++PS+SL +RDLVT +  LL DLKLSPDDSVSDYNPRSFP+SVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

XP_038880609.1 uncharacterized protein LOC120072255 [Benincasa hispida]4.5e-9587.5Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR  KESKKKTR SSPLRDRTG     ESRR GS PS+++PS+SL +RDL+TG+  LL DLKLSPDD VSDYNPRSFPHSVKQQCWDKAEKIKGRDP+RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LUI5 HNH domain-containing protein4.9e-9587Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR +KESKKKTRPSSPLRDRTG+    ESR  GS PS+++PS+SL +RDLVTG+  LL DLK SPDDSVS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

A0A5A7US43 HNH endonuclease1.1e-9487Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR +KESKKKTRPSSPLRDRTGA    ES R GS PS+++PS+SL +RDLVTG+  LL DLK SP+DSVS+YNPRSFPHSVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

A0A6J1C2S9 uncharacterized protein LOC1110074221.9e-110100Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

A0A6J1EZE0 uncharacterized protein LOC1114409501.1e-9487Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR++KESKKKTRPSSPLRDRT  S RFESRR+GS  S ++PS+SL +RDLVT +  LL DLKLSPDDSVSDYNPRSFP+SVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQD GGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

A0A6J1I688 uncharacterized protein LOC1114714892.9e-9587.5Show/hide
Query:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW
        MR++KESKKKTRPSSPLRDRT  S RFESRR+GS  S ++PS+SL +RDLVT +  LL DLKLSPDDSVSDYNPRSFP+SVKQQCWDKAEKIKGRDP RW
Subjt:  MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRDALGN VFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNR+KGNRTE+SRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein2.3e-2841.98Show/hide
Query:  SVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKS
        S  +  PR F    K +CW  A+ + GR P RWR+D  GNIV ++   C GCLC +YDHI+PYSKGG+S  ENCQ+LQ  VNR K  +  +    L   S
Subjt:  SVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARWRRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKS

Query:  SYCRVSGRDMDLLELSAYGNVHRGQDSGGCK
           + + +++D++E++ YG+V R      CK
Subjt:  SYCRVSGRDMDLLELSAYGNVHRGQDSGGCK

AT3G47490.1 HNH endonuclease1.7e-6361.5Show/hide
Query:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW
        T+   +    SSP + R   S    +R  G +R   +  S++L +R+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP RW
Subjt:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ
        RRD LGNIVFRKLVGCPGCLCHDYDHI+PYSKGGKSTLENCQVLQA VNR+KGN+T+ISR+ELIQ+SSYCRV+GRDMDL+EL+AYGNV R   S GC+IQ
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ

AT3G47490.2 HNH endonuclease1.9e-3053.03Show/hide
Query:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW
        T+   +    SSP + R   S    +R  G +R   +  S++L +R+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP RW
Subjt:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSK
        RRD LGNIVFRKLVGCPGCLCHDYDHI+PYSK
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYSK

AT3G47490.3 HNH endonuclease6.6e-6055.91Show/hide
Query:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW
        T+   +    SSP + R   S    +R  G +R   +  S++L +R+          ++ L P     D N  PRSFP+SVKQQCW+KAEKIKGRDP RW
Subjt:  TKESKKKTRPSSPLRDRTGASDRFESRRNG-SRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYN--PRSFPHSVKQQCWDKAEKIKGRDPARW

Query:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLL
        RRD LGNIVFRKLVGCPGCLCHDYDHI+PYS                    KGGKSTLENCQVLQA VNR+KGN+T+ISR+ELIQ+SSYCRV+GRDMDL+
Subjt:  RRDALGNIVFRKLVGCPGCLCHDYDHILPYS--------------------KGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLL

Query:  ELSAYGNVHRGQDSGGCKIQ
        EL+AYGNV R   S GC+IQ
Subjt:  ELSAYGNVHRGQDSGGCKIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCTACCAAAGAATCGAAGAAGAAAACTCGTCCATCATCACCGCTCAGGGACCGAACCGGCGCCTCCGACAGGTTCGAATCGAGGCGTAATGGGTCTCGCCCATC
AACCATCACTCCCTCTTCTTCCCTTCGGGAACGGGACCTCGTCACCGGCGACGACTGTCTTCTCCGAGACCTAAAACTCTCTCCCGATGACTCAGTTTCAGACTATAATC
CCCGTAGCTTTCCTCACAGTGTGAAGCAGCAATGCTGGGACAAGGCCGAGAAGATCAAAGGAAGGGACCCAGCTCGGTGGCGCCGAGATGCTCTTGGTAACATCGTTTTT
CGGAAGCTTGTTGGCTGCCCCGGTTGTCTTTGCCATGATTATGATCACATTTTGCCTTACTCTAAGGGTGGAAAAAGCACTTTGGAAAACTGTCAGGTTTTGCAGGCAAC
CGTTAATCGAACAAAGGGAAACCGTACTGAAATTTCAAGGGCAGAACTAATACAAAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAATTATCTG
CCTATGGAAATGTACATCGTGGACAAGACTCTGGAGGGTGTAAAATTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGCTACCAAAGAATCGAAGAAGAAAACTCGTCCATCATCACCGCTCAGGGACCGAACCGGCGCCTCCGACAGGTTCGAATCGAGGCGTAATGGGTCTCGCCCATC
AACCATCACTCCCTCTTCTTCCCTTCGGGAACGGGACCTCGTCACCGGCGACGACTGTCTTCTCCGAGACCTAAAACTCTCTCCCGATGACTCAGTTTCAGACTATAATC
CCCGTAGCTTTCCTCACAGTGTGAAGCAGCAATGCTGGGACAAGGCCGAGAAGATCAAAGGAAGGGACCCAGCTCGGTGGCGCCGAGATGCTCTTGGTAACATCGTTTTT
CGGAAGCTTGTTGGCTGCCCCGGTTGTCTTTGCCATGATTATGATCACATTTTGCCTTACTCTAAGGGTGGAAAAAGCACTTTGGAAAACTGTCAGGTTTTGCAGGCAAC
CGTTAATCGAACAAAGGGAAACCGTACTGAAATTTCAAGGGCAGAACTAATACAAAAAAGCTCTTACTGCCGGGTTTCAGGTCGAGACATGGATCTTCTTGAATTATCTG
CCTATGGAAATGTACATCGTGGACAAGACTCTGGAGGGTGTAAAATTCAGTGA
Protein sequenceShow/hide protein sequence
MRATKESKKKTRPSSPLRDRTGASDRFESRRNGSRPSTITPSSSLRERDLVTGDDCLLRDLKLSPDDSVSDYNPRSFPHSVKQQCWDKAEKIKGRDPARWRRDALGNIVF
RKLVGCPGCLCHDYDHILPYSKGGKSTLENCQVLQATVNRTKGNRTEISRAELIQKSSYCRVSGRDMDLLELSAYGNVHRGQDSGGCKIQ