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Moc06g02470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g02470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionHNH domain-containing protein
Genome locationchr6:1710744..1712336
RNA-Seq ExpressionMoc06g02470
SyntenyMoc06g02470
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR002711 - HNH endonuclease
IPR003615 - HNH nuclease


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453224.1 PREDICTED: uncharacterized protein LOC103494011 isoform X2 [Cucumis melo]5.9e-9490.56Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKS+KDDVD S+LKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

XP_022135260.1 uncharacterized protein LOC111007267 [Momordica charantia]4.1e-103100Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

XP_022933741.1 uncharacterized protein LOC111441065 [Cucurbita moschata]1.8e-9593.3Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS
        TRVNRFKSDKDDVD SQLKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDS
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS

XP_023531696.1 uncharacterized protein LOC111793864 [Cucurbita pepo subsp. pepo]1.8e-9593.3Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS
        TRVNRFKSDKDDVD SQLKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDS
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS

XP_038878253.1 uncharacterized protein LOC120070538 [Benincasa hispida]4.1e-9590Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGGHRHSGSG+GDERPRFFDTKAKAICW KAD+VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKS+++DVD S+LKGYSCD++FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYK+KDRLAPCKLP +EDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

TrEMBL top hitse value%identityAlignment
A0A1S3BVP6 uncharacterized protein LOC103494011 isoform X22.9e-9490.56Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKS+KDDVD S+LKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

A0A5A7UWI1 HNH endonuclease2.9e-9490.56Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSG+GDERPRFFD KAKA CWAKAD+VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVP+SKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKS+KDDVD S+LKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

A0A6J1C0N7 uncharacterized protein LOC1110072672.0e-103100Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
        TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL

A0A6J1EZW3 uncharacterized protein LOC1114410658.9e-9693.3Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS
        TRVNRFKSDKDDVD SQLKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDS
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS

A0A6J1I7G1 uncharacterized protein LOC1114715098.9e-9693.3Show/hide
Query:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ
        ME TS SPSPTRSRGG R SGSGNG+ERPRFFDTKAKAICWAKAD VPGRHP+RWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTA+NCQILQ
Subjt:  METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQ

Query:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS
        TRVNRFKSDKDDVD SQLKGYSCDV+FTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLP +EDS
Subjt:  TRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G18680.1 HNH endonuclease domain-containing protein5.2e-7270.52Show/hide
Query:  TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTR
        T +  P P+      R +   NG+ERPRFFD KAK  CWA ADIVPGRHP+RWRKD AGN+VCKRF NC GCLCFEYDHIVP+SKGGES AENCQILQTR
Subjt:  TTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTR

Query:  VNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS
        VNRFKS +++VDA+ LK YSC ++FTDKELD+IEMAVYGDV+RPG +CRC+TV+E+LGQ KSKD  A C+LPS
Subjt:  VNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPS

AT3G47490.1 HNH endonuclease8.6e-3547.01Show/hide
Query:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLK
        SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +YDHIVP+SKGG+ST ENCQ+LQ +VNR K +K D+  S+L 
Subjt:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDKDDVDASQLK

Query:  GYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCR
          S   R   +++D+IE+  YG+V R      CR
Subjt:  GYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCR

AT3G47490.2 HNH endonuclease3.6e-1750Show/hide
Query:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSK
        SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +YDHIVP+SK
Subjt:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSK

AT3G47490.3 HNH endonuclease3.4e-3140.91Show/hide
Query:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFS--------------------KGGESTAENCQIL
        SG G+ +  PR F    K  CW KA+ + GR P+RWR+D  GN+V ++   C GCLC +YDHIVP+S                    KGG+ST ENCQ+L
Subjt:  SGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFS--------------------KGGESTAENCQIL

Query:  QTRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCR
        Q +VNR K +K D+  S+L   S   R   +++D+IE+  YG+V R      CR
Subjt:  QTRVNRFKSDKDDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTACTTCCAGATCGCCGTCGCCAACGCGTTCGCGCGGCGGACATAGACACAGTGGCTCCGGCAATGGGGACGAACGGCCGAGATTTTTCGACACCAAAGCGAA
AGCCATTTGTTGGGCCAAGGCCGACATTGTCCCCGGTCGGCACCCCGACCGATGGCGTAAGGACGCCGCGGGTAACGTCGTCTGCAAGCGCTTCTGCAACTGCCAGGGCT
GCCTCTGCTTCGAGTACGATCACATTGTCCCCTTCTCCAAAGGCGGCGAGTCAACGGCAGAGAATTGCCAGATTCTTCAAACGAGGGTTAACAGATTCAAATCGGATAAA
GATGATGTCGATGCATCTCAGTTGAAAGGCTACTCCTGTGATGTCAGGTTTACCGACAAGGAACTTGACATAATTGAAATGGCTGTTTATGGAGACGTAATCCGGCCAGG
GAACCAGTGTCGTTGTAGAACAGTTTCAGAAATGCTGGGACAGTATAAATCAAAGGACCGCCTGGCCCCCTGCAAGCTGCCATCTAGTGAAGATTCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTACTTCCAGATCGCCGTCGCCAACGCGTTCGCGCGGCGGACATAGACACAGTGGCTCCGGCAATGGGGACGAACGGCCGAGATTTTTCGACACCAAAGCGAA
AGCCATTTGTTGGGCCAAGGCCGACATTGTCCCCGGTCGGCACCCCGACCGATGGCGTAAGGACGCCGCGGGTAACGTCGTCTGCAAGCGCTTCTGCAACTGCCAGGGCT
GCCTCTGCTTCGAGTACGATCACATTGTCCCCTTCTCCAAAGGCGGCGAGTCAACGGCAGAGAATTGCCAGATTCTTCAAACGAGGGTTAACAGATTCAAATCGGATAAA
GATGATGTCGATGCATCTCAGTTGAAAGGCTACTCCTGTGATGTCAGGTTTACCGACAAGGAACTTGACATAATTGAAATGGCTGTTTATGGAGACGTAATCCGGCCAGG
GAACCAGTGTCGTTGTAGAACAGTTTCAGAAATGCTGGGACAGTATAAATCAAAGGACCGCCTGGCCCCCTGCAAGCTGCCATCTAGTGAAGATTCTTTATAA
Protein sequenceShow/hide protein sequence
METTSRSPSPTRSRGGHRHSGSGNGDERPRFFDTKAKAICWAKADIVPGRHPDRWRKDAAGNVVCKRFCNCQGCLCFEYDHIVPFSKGGESTAENCQILQTRVNRFKSDK
DDVDASQLKGYSCDVRFTDKELDIIEMAVYGDVIRPGNQCRCRTVSEMLGQYKSKDRLAPCKLPSSEDSL