CuGenDBv2

Gene ID	Moc06g04340
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Extracellular ribonuclease
Genome location	chr6:3115520..3116771
RNA-Seq Expression	Moc06g04340
Synteny	Moc06g04340
Gene Ontology terms	GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0004518 - nuclease activity (molecular function)
InterPro domains	IPR007346 - Endonuclease I

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022134930.1 uncharacterized protein LOC111007064 isoform X1 [Momordica charantia]

3.4e-115

100

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Query:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
        MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
Subjt:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR

Query:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
        WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
Subjt:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK

Query:  SLAGKSKGWN
        SLAGKSKGWN
Subjt:  SLAGKSKGWN

XP_022134931.1 uncharacterized protein LOC111007064 isoform X2 [Momordica charantia]

3.4e-115

100

Show/hide

Query:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
        MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
Subjt:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR

Query:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
        WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
Subjt:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK

Query:  SLAGKSKGWN
        SLAGKSKGWN
Subjt:  SLAGKSKGWN

XP_022931403.1 uncharacterized protein LOC111437594 isoform X1 [Cucurbita moschata]

1.2e-80

75.46

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Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS I    VEIYS
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS

Query:  QRIVSKSLAGKSKGWN
        QRIVSKSLAGK +GWN
Subjt:  QRIVSKSLAGKSKGWN

XP_022931412.1 uncharacterized protein LOC111437594 isoform X2 [Cucurbita moschata]

2.2e-82

76.89

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Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIV
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS IVEIYSQRIV
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIV

Query:  SKSLAGKSKGWN
        SKSLAGK +GWN
Subjt:  SKSLAGKSKGWN

XP_022931421.1 uncharacterized protein LOC111437594 isoform X3 [Cucurbita moschata]

1.2e-80

75.46

Show/hide

Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS I    VEIYS
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS

Query:  QRIVSKSLAGKSKGWN
        QRIVSKSLAGK +GWN
Subjt:  QRIVSKSLAGKSKGWN

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BZ57 uncharacterized protein LOC111007064 isoform X2

1.6e-115

100

Show/hide

Query:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
        MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
Subjt:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR

Query:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
        WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
Subjt:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK

Query:  SLAGKSKGWN
        SLAGKSKGWN
Subjt:  SLAGKSKGWN

A0A6J1BZP9 uncharacterized protein LOC111007064 isoform X1

1.6e-115

100

Show/hide

Query:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
        MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR
Subjt:  MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWR

Query:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
        WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK
Subjt:  WATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSK

Query:  SLAGKSKGWN
        SLAGKSKGWN
Subjt:  SLAGKSKGWN

A0A6J1ETJ3 uncharacterized protein LOC111437594 isoform X2

1.1e-82

76.89

Show/hide

Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIV
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS IVEIYSQRIV
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIV

Query:  SKSLAGKSKGWN
        SKSLAGK +GWN
Subjt:  SKSLAGKSKGWN

A0A6J1ETL7 uncharacterized protein LOC111437594 isoform X3

5.9e-81

75.46

Show/hide

Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS I    VEIYS
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS

Query:  QRIVSKSLAGKSKGWN
        QRIVSKSLAGK +GWN
Subjt:  QRIVSKSLAGKSKGWN

A0A6J1EYI9 uncharacterized protein LOC111437594 isoform X1

5.9e-81

75.46

Show/hide

Query:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS
        +M IDS S  K V+GIE QRPCN ESSSTPSR QLK     KSKFPSV +TKST LRI+FH K  + LN LPFMRV CSVSALF WDSWS ML N   IS
Subjt:  SMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLK----PKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGIS

Query:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS
        WRWATQITSYYLF L L  QAHDYPSPSVRYPCEDVN+YY++V QLTG+PLK KLNS+IAAHHSLSY EVW+AIKILDAADVDKPE SS I    VEIYS
Subjt:  WRWATQITSYYLFLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAI----VEIYS

Query:  QRIVSKSLAGKSKGWN
        QRIVSKSLAGK +GWN
Subjt:  QRIVSKSLAGKSKGWN

SwissProt top hits

e value

%identity

Alignment

O32150 Extracellular ribonuclease

3.9e-05

35.37

Show/hide

Query:  PCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKG-WN
        P  D + YY      TG  LK  L+ +I+ H  LSY+EVW A+K  D    + P   + ++ +Y+    SK+L G + G WN
Subjt:  PCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKG-WN

Q03091 Extracellular ribonuclease

3.9e-05

34.09

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Query:  SPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKG-WN
        S +V  P  D   YY      +G  LK  L+ +I+ H  LSY++VW A+K  D    + P   + ++ +Y+Q   +KS  G S G WN
Subjt:  SPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKG-WN

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTTATCTATGGCGATCGACAGCTTCTCTCCGACGAAATCGGTGGCCGGAATTGAGGCTCAGAGACCATGTAACCAGGAGTCGTCTTCCACACCTAGCCGCTTACAATT
GAAACCGAAATCGAAATTTCCATCGGTTTCAGAGACCAAATCTACGAATCTTCGCATTGATTTTCATCATAAGCTACTCAACAAGCTTAATGTGCTCCCGTTTATGCGAG
TTTGCTGCTCTGTTTCTGCCCTATTTGACTGGGATTCGTGGAGTTGTATGTTGTTGAATTTCTTTGGTATTTCTTGGAGATGGGCGACTCAAATTACCTCCTATTACTTG
TTCTTGCTTTGTTTAGCCGTGCAAGCCCACGATTATCCATCTCCTTCTGTTAGATATCCTTGTGAAGACGTTAACAAGTACTATTCTCATGTACCACAGTTGACAGGAAA
ACCTCTCAAACTTAAGCTGAATTCCATGATTGCAGCACATCATTCCTTGTCCTACAATGAGGTCTGGGAAGCTATCAAGATTCTTGATGCTGCTGATGTGGACAAACCAG
AAGTCTCATCAGCAATAGTGGAGATCTACTCGCAAAGGATTGTGTCAAAGTCTCTAGCAGGGAAAAGCAAGGGTTGGAACAGTAAGTTCTTTAGTGAACTAATTATGGCA
ATTACAATGTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLSMAIDSFSPTKSVAGIEAQRPCNQESSSTPSRLQLKPKSKFPSVSETKSTNLRIDFHHKLLNKLNVLPFMRVCCSVSALFDWDSWSCMLLNFFGISWRWATQITSYYL
FLLCLAVQAHDYPSPSVRYPCEDVNKYYSHVPQLTGKPLKLKLNSMIAAHHSLSYNEVWEAIKILDAADVDKPEVSSAIVEIYSQRIVSKSLAGKSKGWNSKFFSELIMA
ITM

Moc06g04340 (gene) of Bitter gourd (OHB3-1) v2 genome