; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g04350 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g04350
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionExtracellular ribonuclease isoform X3
Genome locationchr6:3116882..3118627
RNA-Seq ExpressionMoc06g04350
SyntenyMoc06g04350
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR007346 - Endonuclease I
IPR044925 - His-Me finger superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK28551.1 extracellular ribonuclease isoform X3 [Cucumis melo var. makuwa]1.3e-8591.07Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEYA+LIWKQISP RESSKF KGKQ
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

XP_016901404.1 PREDICTED: extracellular ribonuclease isoform X4 [Cucumis melo]8.4e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEY +LIWKQISP RESSKF KG+Q
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

XP_022134930.1 uncharacterized protein LOC111007064 isoform X1 [Momordica charantia]4.8e-96100Show/hide
Query:  EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN
        EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN
Subjt:  EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN

Query:  EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
Subjt:  EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

XP_038879109.1 extracellular ribonuclease-like isoform X1 [Benincasa hispida]5.0e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVN SRGNKYFGECQVNSP CLKPAY+EAASDTE DKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
         EMGL+STLLKWNE DPPSREEKLRNDRIC+ YQHNRNPFVDHPEYA+LIWKQ+S  RESSKF KGKQ
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

XP_038879110.1 extracellular ribonuclease-like isoform X2 [Benincasa hispida]5.0e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVN SRGNKYFGECQVNSP CLKPAY+EAASDTE DKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
         EMGL+STLLKWNE DPPSREEKLRNDRIC+ YQHNRNPFVDHPEYA+LIWKQ+S  RESSKF KGKQ
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

TrEMBL top hitse value%identityAlignment
A0A1S4DZL8 extracellular ribonuclease isoform X44.1e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEY +LIWKQISP RESSKF KG+Q
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

A0A1S4E094 extracellular ribonuclease isoform X24.1e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEY +LIWKQISP RESSKF KG+Q
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

A0A5A7UTW8 Extracellular ribonuclease isoform X34.1e-8589.88Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEY +LIWKQISP RESSKF KG+Q
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

A0A5D3DY87 Extracellular ribonuclease isoform X36.3e-8691.07Show/hide
Query:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN
        EHLWPRSYGL RGPSLTDL NIHPAD NVNSSRGNKYFGECQV SP CLKPA +EAASDTE DKEKWAPPKRVRGDIARAVMYMAV YGFHLSDSPNKGN
Subjt:  EHLWPRSYGL-RGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGN

Query:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        NEMGLLSTLLKWNE DPPSREEKLRNDRICK YQHNRNPF+DHPEYA+LIWKQISP RESSKF KGKQ
Subjt:  NEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

A0A6J1BZP9 uncharacterized protein LOC111007064 isoform X12.3e-96100Show/hide
Query:  EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN
        EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN
Subjt:  EHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDSPNKGNN

Query:  EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
        EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ
Subjt:  EMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ

SwissProt top hitse value%identityAlignment
O32150 Extracellular ribonuclease3.9e-2439.51Show/hide
Query:  EHLWPRSYG----LRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCY-------GF
        EH+W +S+G     +GP  TD+ ++ PAD  VNS+RGN  F        +         A     D + W P   V+GD+AR + YMAV Y         
Subjt:  EHLWPRSYG----LRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCY-------GF

Query:  HLSDSPNKGNNEM-GLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIW
         L+D    G+    G  S LL+WN+ DP    E+ RN+ I + YQHNRNPF+DHPE+AD IW
Subjt:  HLSDSPNKGNNEM-GLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIW

P39658 Extracellular deoxyribonuclease1.4e-0533.86Show/hide
Query:  DLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKP-AYREAASDTEADKEKWAPPK-RVRGDIARAVMYMAVCYGFHLSDSPNKGNNEMGLLSTLLKWNES
        D+ N+ PA   VN  R N  F +         KP  Y +     +  + +  PPK  VRG IARA +YM+  YG  L+    K             W+  
Subjt:  DLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKP-AYREAASDTEADKEKWAPPK-RVRGDIARAVMYMAVCYGFHLSDSPNKGNNEMGLLSTLLKWNES

Query:  DPPSREEKLRNDRICKLYQHNRNPFVD
         P  R E  RN RI KL Q N NPF++
Subjt:  DPPSREEKLRNDRICKLYQHNRNPFVD

Q03091 Extracellular ribonuclease2.9e-2742.24Show/hide
Query:  EHLWPRSYGLRGPSL---TDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCY-------GFH
        EH+W +S+G  G +    TD+ ++ PAD  VNS+RGN  F       P+         A     D + W P   V+GD+AR + YMAV Y          
Subjt:  EHLWPRSYGLRGPSL---TDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCY-------GFH

Query:  LSDSPNKGNNE-MGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIW
        L+D    G+   MG LS LLKWN+ DP   +EK RN+ I + YQHNRNPF+DHPE+AD IW
Subjt:  LSDSPNKGNNE-MGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIW

Q44064 Periplasmic deoxyribonuclease4.8e-0633.86Show/hide
Query:  DLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKP-AYREAASDTEADKEKWAPPK-RVRGDIARAVMYMAVCYGFHLSDSPNKGNNEMGLLSTLLKWNES
        D+ N+ PA   VN  R N  F +         KP  Y +     +  +++  PPK  VRG IARA +YM   YG  L+    K             W+  
Subjt:  DLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKP-AYREAASDTEADKEKWAPPK-RVRGDIARAVMYMAVCYGFHLSDSPNKGNNEMGLLSTLLKWNES

Query:  DPPSREEKLRNDRICKLYQHNRNPFVD
         P  R E  RN RI KL Q N NPF++
Subjt:  DPPSREEKLRNDRICKLYQHNRNPFVD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCCTGTACATACTTTACTGTAGAAGGGGAGCATTTGTGGCCTCGTTCGTATGGGCTAAGAGGTCCATCCTTGACCGATTTGCAGAATATCCATCCAGCA
GATAAAAATGTGAATTCCTCCCGGGGAAACAAATATTTTGGAGAATGCCAAGTTAATTCCCCACGATGTTTGAAGCCAGCCTATAGAGAAGCGGCTTCTGATACT
GAAGCCGACAAGGAAAAATGGGCACCACCTAAGCGCGTTAGAGGAGATATAGCAAGGGCAGTGATGTATATGGCAGTTTGTTATGGATTTCACCTTTCTGATTCT
CCAAACAAGGGAAATAACGAGATGGGCCTACTTTCCACATTGTTAAAGTGGAATGAGAGTGATCCGCCATCAAGAGAAGAGAAGTTGAGAAATGACAGAATATGC
AAGCTTTATCAGCACAATAGAAATCCTTTCGTTGATCATCCAGAATATGCTGATCTAATTTGGAAGCAAATTTCTCCAACTCGTGAAAGCTCAAAGTTCCATAAA
GGAAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCCTGTACATACTTTACTGTAGAAGGGGAGCATTTGTGGCCTCGTTCGTATGGGCTAAGAGGTCCATCCTTGACCGATTTGCAGAATATCCATCCAGCA
GATAAAAATGTGAATTCCTCCCGGGGAAACAAATATTTTGGAGAATGCCAAGTTAATTCCCCACGATGTTTGAAGCCAGCCTATAGAGAAGCGGCTTCTGATACT
GAAGCCGACAAGGAAAAATGGGCACCACCTAAGCGCGTTAGAGGAGATATAGCAAGGGCAGTGATGTATATGGCAGTTTGTTATGGATTTCACCTTTCTGATTCT
CCAAACAAGGGAAATAACGAGATGGGCCTACTTTCCACATTGTTAAAGTGGAATGAGAGTGATCCGCCATCAAGAGAAGAGAAGTTGAGAAATGACAGAATATGC
AAGCTTTATCAGCACAATAGAAATCCTTTCGTTGATCATCCAGAATATGCTGATCTAATTTGGAAGCAAATTTCTCCAACTCGTGAAAGCTCAAAGTTCCATAAA
GGAAAGCAATGA
Protein sequenceShow/hide protein sequence
MYACTYFTVEGEHLWPRSYGLRGPSLTDLQNIHPADKNVNSSRGNKYFGECQVNSPRCLKPAYREAASDTEADKEKWAPPKRVRGDIARAVMYMAVCYGFHLSDS
PNKGNNEMGLLSTLLKWNESDPPSREEKLRNDRICKLYQHNRNPFVDHPEYADLIWKQISPTRESSKFHKGKQ