; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g04410 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g04410
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTransmembrane protein 230
Genome locationchr6:3150334..3150728
RNA-Seq ExpressionMoc06g04410
SyntenyMoc06g04410
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008590 - Transmembrane protein 230/134
IPR044234 - Transmembrane protein 230


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021684.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.9e-4592.23Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LL FG IGIVVGI MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_004146339.1 transmembrane protein 230 [Cucumis sativus]2.2e-4591.26Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LLVFG IGI+VG  MASNRVGGDR HGVFFSLLGGLLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_008453547.1 PREDICTED: transmembrane protein 230-like [Cucumis melo]7.6e-4692.23Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LLVFG IGI+VG  MASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_022134647.1 transmembrane protein 230 [Momordica charantia]1.1e-49100Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

XP_038879685.1 transmembrane protein 230 [Benincasa hispida]2.9e-4592.23Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LLVFG IGIVVG  MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

TrEMBL top hitse value%identityAlignment
A0A0A0LUC1 Transmembrane protein 2301.1e-4591.26Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LLVFG IGI+VG  MASNRVGGDR HGVFFSLLGGLLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A1S3BWL2 Transmembrane protein 2303.7e-4692.23Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LLVFG IGI+VG  MASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1C066 Transmembrane protein 2305.5e-50100Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1EUE9 Transmembrane protein 2301.8e-4591.26Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LL FG IGI+VGI MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

A0A6J1I4W8 Transmembrane protein 2301.8e-4591.26Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIMMDSPF VNNRPP KEIALAV+LL FG IGI+VGI MASNRVGGDRAHGVFFSLLG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2308.3e-1146.75Show/hide
Query:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        P+K IALA  L + GT  I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG++G+S+ +IP
Subjt:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

Q5R8X3 Transmembrane protein 2303.1e-1045.45Show/hide
Query:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        P+K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG++G+S+ +IP
Subjt:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

Q5ZLH4 Transmembrane protein 2308.3e-1146.75Show/hide
Query:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        P+K IALAV L + GT  I++G ++ +  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG++G+S+ +IP
Subjt:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

Q8CIB6 Transmembrane protein 2308.3e-1146.75Show/hide
Query:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        P+K IALA  L + GT  I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG++G+S+ +IP
Subjt:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

Q96A57 Transmembrane protein 2303.1e-1045.45Show/hide
Query:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        P+K IALA  L + G   I++G ++ S  +   G DRA  V   ++G L+F+PGFY+ RIAYYA KG++G+S+ +IP
Subjt:  PFKEIALAVALLVFGTIGIVVGIVMASNRV---GGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)3.5e-4176.7Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSI+DED+M+ + + V+NRPP KEI+LAV LLVFGT+GIV+G  MA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        P V
Subjt:  PPV

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)6.5e-1142.86Show/hide
Query:  NRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP
        +R P+K IALAV LL  G + +++   +    + GD + G    +LG L F+PGFY TRIAYY+++G +G+ F+ IP
Subjt:  NRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIP

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)3.4e-4482.52Show/hide
Query:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI
        MAYVDHAFSITDEDIM+++ + VNNRPP KEIALAVALLVFGT+GIV G  MA NRVGGDR HG+FF +LG LLFIPGFYYTRIAYYAYKG+KGFSFSNI
Subjt:  MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNI

Query:  PPV
        PPV
Subjt:  PPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAGGACATTATGATGGATTCGCCGTTCGCGGTGAACAACCGGCCACCATTCAAGGAGATCGCTCTCGCCGTCGC
TCTTCTCGTTTTCGGCACCATTGGAATCGTCGTTGGAATCGTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCTTTGTTGGGAGGTCTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCCTACTACGCTTATAAGGGTTTCAAAGGCTTCTCCTTCTCCAACATACCCCCTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTACGTGGACCATGCGTTTTCGATAACAGACGAGGACATTATGATGGATTCGCCGTTCGCGGTGAACAACCGGCCACCATTCAAGGAGATCGCTCTCGCCGTCGC
TCTTCTCGTTTTCGGCACCATTGGAATCGTCGTTGGAATCGTCATGGCCAGTAATCGAGTCGGTGGTGATCGTGCTCACGGGGTGTTTTTCTCTTTGTTGGGAGGTCTCT
TGTTTATTCCGGGTTTCTATTACACGCGGATTGCCTACTACGCTTATAAGGGTTTCAAAGGCTTCTCCTTCTCCAACATACCCCCTGTCTAA
Protein sequenceShow/hide protein sequence
MAYVDHAFSITDEDIMMDSPFAVNNRPPFKEIALAVALLVFGTIGIVVGIVMASNRVGGDRAHGVFFSLLGGLLFIPGFYYTRIAYYAYKGFKGFSFSNIPPV