; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g04620 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g04620
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCadherin-4 like
Genome locationchr6:3320362..3323733
RNA-Seq ExpressionMoc06g04620
SyntenyMoc06g04620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058224.1 uncharacterized protein E6C27_scaffold274G005480 [Cucumis melo var. makuwa]3.1e-9376.82Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MAR+ +LSQS + SKFQ     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+ILAIRKLDDFVQ+IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKRLIDGCRSFGRMNRVESDGDERSERNGML
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCL+FFAKESISG TRLAPVDTELET+N  ELEIDV+ P R +DGC+ F R N VESDGDERSERN +L
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKRLIDGCRSFGRMNRVESDGDERSERNGML

Query:  YRRFE----------LRLACPVYSKPTLHPLPR
        YR+F+          LRL CPVY KPTLHP P+
Subjt:  YRRFE----------LRLACPVYSKPTLHPLPR

KAG6587735.1 hypothetical protein SDJN03_16300, partial [Cucurbita argyrosperma subsp. sororia]9.8e-7987.06Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP

XP_022135304.1 uncharacterized protein LOC111007300 [Momordica charantia]2.8e-89100Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK

XP_022932487.1 uncharacterized protein LOC111438888 isoform X1 [Cucurbita moschata]1.7e-7887.06Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP

XP_022974211.1 uncharacterized protein LOC111472830 isoform X1 [Cucurbita maxima]2.2e-7887.06Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD ELET+NE+ELEI+VK P
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP

TrEMBL top hitse value%identityAlignment
A0A5D3DYD5 Uncharacterized protein1.5e-9376.82Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MAR+ +LSQS + SKFQ     LS+LIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS+ILAIRKLDDFVQ+IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKRLIDGCRSFGRMNRVESDGDERSERNGML
        NKPR+VVDLFDKLVEP+ KE+SPSLANARGWPCL+FFAKESISG TRLAPVDTELET+N  ELEIDV+ P R +DGC+ F R N VESDGDERSERN +L
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKRLIDGCRSFGRMNRVESDGDERSERNGML

Query:  YRRFE----------LRLACPVYSKPTLHPLPR
        YR+F+          LRL CPVY KPTLHP P+
Subjt:  YRRFE----------LRLACPVYSKPTLHPLPR

A0A6J1C135 uncharacterized protein LOC1110073001.3e-89100Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPK

A0A6J1E5F5 uncharacterized protein LOC1114301026.6e-7382.14Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+ SQS + SK QS+P +L LLIPSSF LGHRNRSTRSGK KFIEIDLESSSFG DS++LAIRKLDDFV++IIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVK
         KPRKVVDLFDKLVEPL+KE SPSLAN+RGWPCL+FFAK SISG+TRLAPVDTE + +NEVELEI+VK
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVK

A0A6J1EWU2 uncharacterized protein LOC111438888 isoform X18.1e-7987.06Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD+ELET+NE+ELEI+VK P
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP

A0A6J1IDD9 uncharacterized protein LOC111472830 isoform X11.1e-7887.06Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR
        MARIL+LSQS + +K QS+P +LSLLIPSSF LGHRNRSTRSGKVKFIEIDLESSSFG DS++LAIRKLDDFVQKIIVERSTPDW+PFVPGSSFWVPPRR
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRR

Query:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP
        NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCL+FFAKESISG+TRL PVD ELET+NE+ELEI+VK P
Subjt:  NKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.1 unknown protein7.1e-1938.79Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K       +   ++T+ ETT+  E
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE

AT1G16840.3 unknown protein7.1e-1938.79Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K       +   ++T+ ETT+  E
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE

AT1G16840.4 unknown protein7.1e-1938.79Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-
        MAR  + S SL   +F ++    S L+PSS  +  R++S+ R G +   EID  ++S    SD L I+KL+D V +I V R+ PDW+PFVPG+S+WVPP 
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRST-RSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPP-

Query:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE
           ++   +  L  KL  PLT EES S  ++ GWP  ++F K       +   ++T+ ETT+  E
Subjt:  -RRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVE

AT1G78890.1 unknown protein1.4e-2241.67Show/hide
Query:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFW
        MAR L+ S SL   +F ++    SLL+PSS  +  R    NR + S  +  I EID+ +           + KL+D V +I+V RS PDW+PFVPG+SFW
Subjt:  MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHR----NRSTRSGKVKFI-EIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFW

Query:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAK
        VPP R++   +  L +KL  P++ EES S+++ RGWPC ++F K
Subjt:  VPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAK

AT2G19180.1 unknown protein4.8e-2341.46Show/hide
Query:  IEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTR
        IE++++S +   +++   ++KL++FV++IIV  STPDW+PF PGSSFWVPP +    K+ +L DK+  PLT+EES SL++  GWPC  FF          
Subjt:  IEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLFDKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTR

Query:  LAPVDTELETTNEVELEIDVKAP
        + P D    +T E E  +++K P
Subjt:  LAPVDTELETTNEVELEIDVKAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACGAATTCTGGCTCTCTCCCAATCCCTTCTCTGCTCCAAGTTTCAATCTTCCCCCTTCAGATTGTCGTTGTTGATTCCTTCTTCCTTTGCCCTGGGTCATCGGAA
CCGATCTACGCGTTCTGGCAAGGTCAAATTCATCGAGATTGACCTCGAATCGTCCTCTTTCGGCGGTGATTCCGATATTCTAGCGATCAGGAAGCTGGACGACTTTGTGC
AGAAGATTATTGTCGAGCGATCGACTCCTGATTGGATTCCCTTTGTACCGGGTTCGTCTTTTTGGGTTCCTCCTCGCCGTAACAAGCCACGCAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCACTCACCAAAGAGGAGTCTCCCTCCCTTGCTAACGCCCGTGGTTGGCCCTGTTTAGAATTTTTCGCTAAAGAGTCTATCTCTGGATCAACTCG
ATTGGCTCCGGTAGACACTGAGTTGGAAACCACAAATGAGGTGGAGTTGGAGATTGACGTGAAGGCACCAAAAAGATTGATAGATGGTTGTCGGAGCTTTGGAAGAATGA
ATAGAGTGGAAAGTGATGGTGATGAGAGGTCGGAGAGAAATGGGATGCTCTACAGACGGTTTGAGCTTCGTCTCGCCTGCCCTGTCTATTCAAAGCCCACTCTGCACCCC
CTCCCTAGACTACTGGTCAACGAGATTTTAGAACTGGATTCATATCTACAACTGTTCTTTGTTTTCCTTTTCTTGACTGACAAACAGTTGAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACGAATTCTGGCTCTCTCCCAATCCCTTCTCTGCTCCAAGTTTCAATCTTCCCCCTTCAGATTGTCGTTGTTGATTCCTTCTTCCTTTGCCCTGGGTCATCGGAA
CCGATCTACGCGTTCTGGCAAGGTCAAATTCATCGAGATTGACCTCGAATCGTCCTCTTTCGGCGGTGATTCCGATATTCTAGCGATCAGGAAGCTGGACGACTTTGTGC
AGAAGATTATTGTCGAGCGATCGACTCCTGATTGGATTCCCTTTGTACCGGGTTCGTCTTTTTGGGTTCCTCCTCGCCGTAACAAGCCACGCAAGGTGGTCGACCTGTTC
GATAAATTGGTTGAACCACTCACCAAAGAGGAGTCTCCCTCCCTTGCTAACGCCCGTGGTTGGCCCTGTTTAGAATTTTTCGCTAAAGAGTCTATCTCTGGATCAACTCG
ATTGGCTCCGGTAGACACTGAGTTGGAAACCACAAATGAGGTGGAGTTGGAGATTGACGTGAAGGCACCAAAAAGATTGATAGATGGTTGTCGGAGCTTTGGAAGAATGA
ATAGAGTGGAAAGTGATGGTGATGAGAGGTCGGAGAGAAATGGGATGCTCTACAGACGGTTTGAGCTTCGTCTCGCCTGCCCTGTCTATTCAAAGCCCACTCTGCACCCC
CTCCCTAGACTACTGGTCAACGAGATTTTAGAACTGGATTCATATCTACAACTGTTCTTTGTTTTCCTTTTCTTGACTGACAAACAGTTGAAAGGCTAA
Protein sequenceShow/hide protein sequence
MARILALSQSLLCSKFQSSPFRLSLLIPSSFALGHRNRSTRSGKVKFIEIDLESSSFGGDSDILAIRKLDDFVQKIIVERSTPDWIPFVPGSSFWVPPRRNKPRKVVDLF
DKLVEPLTKEESPSLANARGWPCLEFFAKESISGSTRLAPVDTELETTNEVELEIDVKAPKRLIDGCRSFGRMNRVESDGDERSERNGMLYRRFELRLACPVYSKPTLHP
LPRLLVNEILELDSYLQLFFVFLFLTDKQLKG