; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g04820 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g04820
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationchr6:3541072..3541650
RNA-Seq ExpressionMoc06g04820
SyntenyMoc06g04820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587751.1 hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sororia]9.9e-3150.76Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK++K+S L   F+    RF SCGS  C+F++S  +  SSSSS S SS           LP AESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

KAG7021722.1 Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3051.02Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRR
          WRKQ  SK++K+S L   F+    RF SCGS  C+F++S  +  SSSSS S SS           LP AESS   R GCGPW IN ++IAIGRR
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRR

XP_022930189.1 uncharacterized protein LOC111436686 [Cucurbita moschata]1.2e-3151.27Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK++K+S L   F     RF SCGS  C+F++SP +  SSSSS  SS            LPAAESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]1.8e-3251.78Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK+KK+S L   F+    RF SCGS  C+F++SP +  SSSSS  SS            LPAAESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

XP_023530969.1 uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]5.2e-3251.78Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+        P+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFD---QRFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK+KK+S L   F+    RF SCGS  C+F++SP +  SSSSS S SS           LPAAESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFD---QRFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein4.1e-3048.48Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY-RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPI-FVGRRPSRNPLF
        MKE K+ + + FVL LD  PSRNSSMS SSR YY R++EGVPFQWEM PGTPKN+      PP   V+ PPISPPPA L  GL KP+  V  +     LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY-RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPI-FVGRRPSRNPLF

Query:  GSWRKQSNSKAKK----YSSLDKSFDQRFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
        G WRKQ   K KK        +K+   RF SCGS  C+ M                   + S  K    PA  SSG WR GCGPW IN IKI +GRR+
Subjt:  GSWRKQSNSKAKK----YSSLDKSFDQRFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like8.8e-2546.86Show/hide
Query:  MSCSSRLYY-RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPI-FVGRRPSRNPLFGSWRKQSNSKAKKYSS-----LDKS
        MS SSR YY R++EGVPFQWEM PGTPK++      PP   V+PPPISPPPA L  G  KP+  V  + S   LFG WRKQ   K K   +     L+K+
Subjt:  MSCSSRLYY-RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPI-FVGRRPSRNPLFGSWRKQSNSKAKKYSS-----LDKS

Query:  FDQ-RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
         ++ RF SCGS  C+ M                   + S  KD   P  ESSG+WR GCGPW IN IKI +GRR+
Subjt:  FDQ-RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

A0A6J1EQV3 uncharacterized protein LOC1114366865.7e-3251.27Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK++K+S L   F     RF SCGS  C+F++SP +  SSSSS  SS            LPAAESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

A0A6J1KZJ1 uncharacterized protein LOC1114996808.7e-3351.78Show/hide
Query:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF
        MK+ KD+   +FVL LD LPSR SS+ CSSRLYY  R++EGVPFQWEM PGTPK+       PP+   V   I+PPPAAL    PKP     + S   LF
Subjt:  MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLF

Query:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL
          WRKQ  SK+KK+S L   F+    RF SCGS  C+F++SP +  SSSSS  SS            LPAAESS   R GCGPW IN ++IAIGRR+
Subjt:  GSWRKQSNSKAKKYSSLDKSFDQ---RFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL

A0A7J7DSS9 Uncharacterized protein1.9e-1940.29Show/hide
Query:  EDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKP----IFVGRRPSRNPLFGS
        +D D + L  DR+ SR+SS+ CSSR+YY  RS+EGVPFQWEM PGTPK+       PP +  + PP+SPPPA +  G+PKP    I    + S    F  
Subjt:  EDGDQFVLCLDRLPSRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKP----IFVGRRPSRNPLFGS

Query:  WRKQSNSKAKKY---------SSLDKSFDQRFRSCG--SDGCDFMESPTKTTSSSSSFSSSSFSS--SSISKDPPLPAAES-SGRWRPGCGPWSINIIKI
        W  +  +K +K          S++D   + R   CG  SDG + M +P  + SSSSS SS SFS+  S  S     PA ES  G +  GC P + N + +
Subjt:  WRKQSNSKAKKY---------SSLDKSFDQRFRSCG--SDGCDFMESPTKTTSSSSSFSSSSFSS--SSISKDPPLPAAES-SGRWRPGCGPWSINIIKI

Query:  AIGRRL
         + RR+
Subjt:  AIGRRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)5.1e-0946.46Show/hide
Query:  SRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLFGSWRKQSNSK---AKKYSS
        SRNSS+      YY  R  EGVPF+WEM PGTP N        P E V  PP+SPPPA L  GLPKP      P +N +F +  K  N K    K+Y S
Subjt:  SRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLFGSWRKQSNSK---AKKYSS

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B5.1e-0946.46Show/hide
Query:  SRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLFGSWRKQSNSK---AKKYSS
        SRNSS+      YY  R  EGVPF+WEM PGTP N        P E V  PP+SPPPA L  GLPKP      P +N +F +  K  N K    K+Y S
Subjt:  SRNSSMSCSSRLYY--RSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLFGSWRKQSNSK---AKKYSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGGCGAAGGATGAAGATGGGGATCAATTTGTGCTGTGTTTGGATAGGCTTCCTTCCAGAAACTCTTCTATGAGTTGTTCTTCTCGTTTGTACTACCGGAGCTC
TGAAGGGGTTCCGTTTCAGTGGGAGATGCTTCCGGGGACGCCCAAGAATGATAATATTGATGATATAATTCCGCCGCACGAGGCGGTGGTTCCGCCGCCGATCAGCCCTC
CCCCGGCGGCGCTCGGCCGGGGACTGCCCAAGCCCATTTTTGTGGGTCGCCGGCCGAGTAGAAACCCGCTGTTTGGGTCGTGGAGGAAGCAATCAAATTCCAAGGCCAAG
AAATATTCCAGTTTGGATAAGTCGTTCGATCAGAGATTTCGGTCTTGTGGATCCGACGGCTGTGATTTTATGGAATCTCCAACCAAAACAACCTCTTCCTCTTCTTCTTT
TTCTTCTTCTTCTTTCTCGTCGTCGTCGATCTCTAAGGATCCGCCCTTGCCGGCGGCGGAATCTTCCGGCCGGTGGCGGCCGGGTTGCGGTCCGTGGAGTATCAACATAA
TTAAAATTGCAATTGGGAGGCGACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGGCGAAGGATGAAGATGGGGATCAATTTGTGCTGTGTTTGGATAGGCTTCCTTCCAGAAACTCTTCTATGAGTTGTTCTTCTCGTTTGTACTACCGGAGCTC
TGAAGGGGTTCCGTTTCAGTGGGAGATGCTTCCGGGGACGCCCAAGAATGATAATATTGATGATATAATTCCGCCGCACGAGGCGGTGGTTCCGCCGCCGATCAGCCCTC
CCCCGGCGGCGCTCGGCCGGGGACTGCCCAAGCCCATTTTTGTGGGTCGCCGGCCGAGTAGAAACCCGCTGTTTGGGTCGTGGAGGAAGCAATCAAATTCCAAGGCCAAG
AAATATTCCAGTTTGGATAAGTCGTTCGATCAGAGATTTCGGTCTTGTGGATCCGACGGCTGTGATTTTATGGAATCTCCAACCAAAACAACCTCTTCCTCTTCTTCTTT
TTCTTCTTCTTCTTTCTCGTCGTCGTCGATCTCTAAGGATCCGCCCTTGCCGGCGGCGGAATCTTCCGGCCGGTGGCGGCCGGGTTGCGGTCCGTGGAGTATCAACATAA
TTAAAATTGCAATTGGGAGGCGACTTTGA
Protein sequenceShow/hide protein sequence
MKEAKDEDGDQFVLCLDRLPSRNSSMSCSSRLYYRSSEGVPFQWEMLPGTPKNDNIDDIIPPHEAVVPPPISPPPAALGRGLPKPIFVGRRPSRNPLFGSWRKQSNSKAK
KYSSLDKSFDQRFRSCGSDGCDFMESPTKTTSSSSSFSSSSFSSSSISKDPPLPAAESSGRWRPGCGPWSINIIKIAIGRRL