; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g05110 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g05110
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr6:3711641..3712551
RNA-Seq ExpressionMoc06g05110
SyntenyMoc06g05110
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150099.1 uncharacterized protein LOC111018360 [Momordica charantia]4.1e-12393.06Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP
        MA+AERLLDY+SEPSHPKKNATNPTGG+KTFKPFTPKS GADKRPQGPNPGPSRGPYPQ QNAQR +S FLCKGPHRVAECPHRAALTALQASVQSCNEP
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP

Query:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS
        +V TDCEKEE EETPRM ALKFLS IQKRVNGPKGTSEKGLMFVDATINCN AKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMK VN EALPIVGVS
Subjt:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS

Query:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KRV LKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_022154605.1 uncharacterized protein LOC111021829 [Momordica charantia]2.0e-12593.88Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP
        MASAERLLDYSSEPSHPKKNATNPTGG+KTFKPFTPK  GADKRP GPNPGPSRGPYPQ QNAQRP SCFLC+GPH+VAECPHRAALTALQASVQSCNEP
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP

Query:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS
        +VGTDCEKEE EETPRMGALKFLS IQKRVNGPKGTSEKGLMFVDA INCNPAKS MVDSGATHNFISEQEA RLKLTIEKDTGKMKAVNSEALPIVGVS
Subjt:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS

Query:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KRVTLKLGTWTGS DFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_022975706.1 uncharacterized protein LOC111475733, partial [Cucurbita maxima]1.3e-7157.53Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPK--------------SEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAA
        MA  ERLLDY +E    ++    P  G K +KP + +              S   D+ PQ    G SR PY Q  +   P+ C LCKGPH+V+ CPHR +
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPK--------------SEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAA

Query:  LTALQASVQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKM
        LTALQ S+Q  N+ +V T  +K+E ++ PRMGALKFLS +Q++V  PK   EKGLMFVDATIN  P +ST++DSGATHNFI++QEARRL LTI +D GKM
Subjt:  LTALQASVQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKM

Query:  KAVNSEALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KA+NSEALPIVGVSKRV  K+G WTG +D VV RMDDFDVVLGMEFL+EHKVIPMPLAK
Subjt:  KAVNSEALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_023524533.1 uncharacterized protein LOC111788429 [Cucurbita pepo subsp. pepo]1.5e-7260.71Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKP------FTPKSEG-ADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQAS
        MA AERL+D  +E    ++    P  G K ++P         +S G  D+ PQ    G SRGPY Q  +   P+ C LCKGPH+V+ CPHRA+LTALQ S
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKP------FTPKSEG-ADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQAS

Query:  VQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEA
        +Q  NE +V T  +K+E  + PRMGALKFLS +Q++V  PK   EKGLMFVDATIN   +KST++DSGATHNFI++QEARRL LTI KD GKMKAVNSEA
Subjt:  VQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEA

Query:  LPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        LPIVGVSK V  K+G WTG +D VVVRMDDFDVVLGMEFL+EHKVIPMPLAK
Subjt:  LPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

XP_023537907.1 uncharacterized protein LOC111798805 [Cucurbita pepo subsp. pepo]1.5e-7260.71Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKP------FTPKSEG-ADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQAS
        MA AERL+D  +E    ++    P  G K ++P         +S G  D+ PQ    G SRGPY Q  +   P+ C LCKGPH+V+ CPHRA+LTALQ S
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKP------FTPKSEG-ADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQAS

Query:  VQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEA
        +Q  NE +V T  +K+E  + PRMGALKFLS +Q++V  PK   EKGLMFVDATIN   +KST++DSGATHNFI++QEARRL LTI KD GKMKAVNSEA
Subjt:  VQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEA

Query:  LPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        LPIVGVSK V  K+G WTG +D VVVRMDDFDVVLGMEFL+EHKVIPMPLAK
Subjt:  LPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

TrEMBL top hitse value%identityAlignment
A0A5A7TAG9 Reverse transcriptase2.3e-6354.15Show/hide
Query:  ASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQG------PNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQ
        A+AERL D S++P   +++ ++ +GGS+  +P +PK+ G D+R  G       N G S         + RP+SCF+CKGPH   ECP++ A  A QAS+ 
Subjt:  ASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQG------PNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQ

Query:  SCNEPQVG-TDCEKEEVEE--TPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSE
        S ++ Q   T+ E  + EE   PRMGALKFLS++QK+V       E+GLM+VD  IN  P KSTMVDSGATHNFI+E EA+RL L  EKD G+MKAVNS 
Subjt:  SCNEPQVG-TDCEKEEVEE--TPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSE

Query:  ALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        ALPI+G+ KR  ++LG W+G VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  ALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A5D3C9P8 Reverse transcriptase1.4e-6355.12Show/hide
Query:  ASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQG------PNPGPS-RGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASV
        A+AERL D S++    +++ ++ +GGS+  +P +PK+ G D+R  G       N G S RGP  Q   + RP+SCF+CKGPH   ECP++ A  A QAS+
Subjt:  ASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQG------PNPGPS-RGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASV

Query:  QSCNEPQVG-TDCEKEEVEE--TPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNS
         S ++ Q   T+ E ++ EE   PRMGALKFLS++QK+V       E+GLM+VD  IN  P KSTMVDSGATHNFI+E EA+RL L  EKD G+MKAVNS
Subjt:  QSCNEPQVG-TDCEKEEVEE--TPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNS

Query:  EALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
         ALPI+G+ KR  ++LG W+G VDFVVV+MDDFDVVLGMEFL+EH+VIPMPLAK
Subjt:  EALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A6J1D906 Reverse transcriptase2.0e-12393.06Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP
        MA+AERLLDY+SEPSHPKKNATNPTGG+KTFKPFTPKS GADKRPQGPNPGPSRGPYPQ QNAQR +S FLCKGPHRVAECPHRAALTALQASVQSCNEP
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP

Query:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS
        +V TDCEKEE EETPRM ALKFLS IQKRVNGPKGTSEKGLMFVDATINCN AKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMK VN EALPIVGVS
Subjt:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS

Query:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KRV LKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A6J1DK29 uncharacterized protein LOC1110218299.6e-12693.88Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP
        MASAERLLDYSSEPSHPKKNATNPTGG+KTFKPFTPK  GADKRP GPNPGPSRGPYPQ QNAQRP SCFLC+GPH+VAECPHRAALTALQASVQSCNEP
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEP

Query:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS
        +VGTDCEKEE EETPRMGALKFLS IQKRVNGPKGTSEKGLMFVDA INCNPAKS MVDSGATHNFISEQEA RLKLTIEKDTGKMKAVNSEALPIVGVS
Subjt:  QVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVS

Query:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KRVTLKLGTWTGS DFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
Subjt:  KRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

A0A6J1IEY4 uncharacterized protein LOC1114757336.1e-7257.53Show/hide
Query:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPK--------------SEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAA
        MA  ERLLDY +E    ++    P  G K +KP + +              S   D+ PQ    G SR PY Q  +   P+ C LCKGPH+V+ CPHR +
Subjt:  MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPK--------------SEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAA

Query:  LTALQASVQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKM
        LTALQ S+Q  N+ +V T  +K+E ++ PRMGALKFLS +Q++V  PK   EKGLMFVDATIN  P +ST++DSGATHNFI++QEARRL LTI +D GKM
Subjt:  LTALQASVQSCNEPQVGTDCEKEEVEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKM

Query:  KAVNSEALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK
        KA+NSEALPIVGVSKRV  K+G WTG +D VV RMDDFDVVLGMEFL+EHKVIPMPLAK
Subjt:  KAVNSEALPIVGVSKRVTLKLGTWTGSVDFVVVRMDDFDVVLGMEFLIEHKVIPMPLAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGCCGAAAGATTGCTAGACTATAGCAGTGAACCATCCCACCCAAAAAAGAATGCTACAAACCCCACTGGGGGAAGCAAGACGTTCAAACCCTTTACCCCAAA
GAGTGAGGGAGCTGACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAATGTCAAAACGCTCAAAGGCCGATATCATGCTTCTTGTGCAAAG
GTCCCCACCGGGTAGCTGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTCAAGTTGGAACGGATTGTGAGAAGGAAGAA
GTCGAAGAAACACCTAGAATGGGGGCGTTAAAATTCCTATCTACCATTCAAAAGAGGGTCAATGGACCCAAAGGAACATCCGAAAAGGGGCTTATGTTCGTAGATGCTAC
GATCAATTGTAACCCTGCAAAGAGCACCATGGTGGATTCGGGTGCAACCCACAACTTCATATCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGG
GTAAGATGAAGGCCGTCAACTCCGAAGCTCTACCCATTGTGGGAGTTTCTAAAAGAGTGACGTTGAAATTAGGGACGTGGACAGGCAGTGTCGATTTCGTAGTAGTTCGC
ATGGACGACTTCGACGTTGTACTGGGGATGGAGTTCCTCATCGAACATAAAGTCATACCGATGCCTCTGGCCAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCT
TTATGGCCATTCCGATGGTCGAACAGCCGGTGGAGACAAGAGATGTCCCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTGCCGAAAGATTGCTAGACTATAGCAGTGAACCATCCCACCCAAAAAAGAATGCTACAAACCCCACTGGGGGAAGCAAGACGTTCAAACCCTTTACCCCAAA
GAGTGAGGGAGCTGACAAGAGACCTCAAGGCCCGAATCCCGGTCCTTCCCGAGGACCCTATCCACAATGTCAAAACGCTCAAAGGCCGATATCATGCTTCTTGTGCAAAG
GTCCCCACCGGGTAGCTGAATGCCCACACCGAGCTGCCCTTACTGCCCTTCAAGCATCCGTTCAGTCGTGCAATGAACCTCAAGTTGGAACGGATTGTGAGAAGGAAGAA
GTCGAAGAAACACCTAGAATGGGGGCGTTAAAATTCCTATCTACCATTCAAAAGAGGGTCAATGGACCCAAAGGAACATCCGAAAAGGGGCTTATGTTCGTAGATGCTAC
GATCAATTGTAACCCTGCAAAGAGCACCATGGTGGATTCGGGTGCAACCCACAACTTCATATCAGAACAGGAAGCCCGCCGACTGAAATTGACTATTGAGAAGGATACGG
GTAAGATGAAGGCCGTCAACTCCGAAGCTCTACCCATTGTGGGAGTTTCTAAAAGAGTGACGTTGAAATTAGGGACGTGGACAGGCAGTGTCGATTTCGTAGTAGTTCGC
ATGGACGACTTCGACGTTGTACTGGGGATGGAGTTCCTCATCGAACATAAAGTCATACCGATGCCTCTGGCCAAGTTTGAAGAAAGGCCTCAACCGGGAGGAACCTACCT
TTATGGCCATTCCGATGGTCGAACAGCCGGTGGAGACAAGAGATGTCCCACCTAA
Protein sequenceShow/hide protein sequence
MASAERLLDYSSEPSHPKKNATNPTGGSKTFKPFTPKSEGADKRPQGPNPGPSRGPYPQCQNAQRPISCFLCKGPHRVAECPHRAALTALQASVQSCNEPQVGTDCEKEE
VEETPRMGALKFLSTIQKRVNGPKGTSEKGLMFVDATINCNPAKSTMVDSGATHNFISEQEARRLKLTIEKDTGKMKAVNSEALPIVGVSKRVTLKLGTWTGSVDFVVVR
MDDFDVVLGMEFLIEHKVIPMPLAKFEERPQPGGTYLYGHSDGRTAGGDKRCPT