; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g05740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g05740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationchr6:4164086..4164415
RNA-Seq ExpressionMoc06g05740
SyntenyMoc06g05740
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035100.1 hypothetical protein E6C27_scaffold57G001750 [Cucumis melo var. makuwa]4.3e-0745.13Show/hide
Query:  MAAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP--FHFGSL
        MAA+  F + +ALI+LLLFSESL A+SS D+G +SN                RR D    ++LA KI  KRGVRS V AGR++ S S++     F+ GSL
Subjt:  MAAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP--FHFGSL

Query:  LCFCIAFASVLLL
        +CF IAF   + L
Subjt:  LCFCIAFASVLLL

KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0642.45Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG
        MA +K  +SIAL+ALLL SE L +S+AD+G   +   G+ RR+ L  + R +  +N +G   + +  I+R  R AV   RA G SPS    SR   F  G
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG

Query:  SLLCFC
        SLLC C
Subjt:  SLLCFC

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]9.3e-1047.47Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEK--ISIKRGVRSAVIAGRASGSPSSRAPPFHFGSLL
        MAA+K  VS+AL+ALLLFSESL  S+ D   DSNS TG+LRRN+L  +  +  DNSV S+   K  + IKR +R      R+S +  SR      GS+L
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEK--ISIKRGVRSAVIAGRASGSPSSRAPPFHFGSLL

KAG6587814.1 hypothetical protein SDJN03_16379, partial [Cucurbita argyrosperma subsp. sororia]8.1e-2260.19Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPPFHFGSLLCFC
        MA +K    I LI LLL SES  VSSADY  D  S TGIL RN+LHP   +R D   GS+LAEKISIKRG RSAVI G +S S SSR PPF+  S++CF 
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPPFHFGSLLCFC

Query:  IAFASVLL
         AFA  LL
Subjt:  IAFASVLL

KGN65176.1 hypothetical protein Csa_019975 [Cucumis sativus]1.3e-0847.79Show/hide
Query:  AAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP---FHFGSL
        AA+  F + IALI+LLLFSESL A+SS+D+  DSN                R  D   G++L EKISIKRGVRS VIAGR++ S S+R      F+ GS+
Subjt:  AAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP---FHFGSL

Query:  LCFCIAFASVLLL
        +CF IAF   + L
Subjt:  LCFCIAFASVLLL

TrEMBL top hitse value%identityAlignment
A0A0A0LYV9 Uncharacterized protein6.5e-0947.79Show/hide
Query:  AAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP---FHFGSL
        AA+  F + IALI+LLLFSESL A+SS+D+  DSN                R  D   G++L EKISIKRGVRS VIAGR++ S S+R      F+ GS+
Subjt:  AAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP---FHFGSL

Query:  LCFCIAFASVLLL
        +CF IAF   + L
Subjt:  LCFCIAFASVLLL

A0A5D3BCG4 Uncharacterized protein2.1e-0745.13Show/hide
Query:  MAAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP--FHFGSL
        MAA+  F + +ALI+LLLFSESL A+SS D+G +SN                RR D    ++LA KI  KRGVRS V AGR++ S S++     F+ GSL
Subjt:  MAAVKPF-VSIALIALLLFSESL-AVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPP--FHFGSL

Query:  LCFCIAFASVLLL
        +CF IAF   + L
Subjt:  LCFCIAFASVLLL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.2e-0540.54Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEK-----ISIKRGVRSAVIAG-----RASGSPSSRAPP
        MAA++P VSIAL+ALL FSESL          S+S TGI  RN+LH    R  + SV S+   K        +R +R  +I+G       S    SR   
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEK-----ISIKRGVRSAVIAG-----RASGSPSSRAPP

Query:  FHFGSLLCFCI
        F  GS+LC CI
Subjt:  FHFGSLLCFCI

A0A6J1GRX2 uncharacterized protein LOC1114564661.2e-0539.82Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG
        MA +K  +SIAL+ALLL SE L +S+AD+G   +    + RR+ L  + R +  +N +G   + +  I+R  R AV   RA G SPS    S+   F  G
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG

Query:  SLLCFCIAFASVL
        SLLC C  F   L
Subjt:  SLLCFCIAFASVL

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X16.7e-0639.82Show/hide
Query:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG
        MA +K  +SIAL+ALLL  E L +S+AD+G   +   G+ R + L  + R +  +N +G+  + +  I+R  R AV   RA G SPS    SR   F  G
Subjt:  MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRR-EDNSVGSNLAEKISIKRGVRSAVIAGRASG-SPS----SRAPPFHFG

Query:  SLLCFCIAFASVL
        SLLC C  F   L
Subjt:  SLLCFCIAFASVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGTTAAACCCTTCGTTTCGATAGCCCTAATTGCTCTTCTCTTGTTTTCTGAATCCCTCGCTGTTTCGTCCGCTGACTACGGCCCGGATTCGAATTCCTTCAC
CGGAATACTCCGCCGGAATCTGCTCCACCCATCGGGGCGTCGGCGGGAAGATAATAGCGTCGGCTCCAATTTGGCCGAGAAGATCAGTATCAAAAGGGGGGTTCGATCCG
CCGTAATTGCTGGTCGTGCCAGTGGATCGCCGTCCAGCCGGGCACCGCCCTTTCATTTTGGGTCTCTGCTCTGTTTCTGCATCGCCTTTGCGTCTGTTTTGTTATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGTTAAACCCTTCGTTTCGATAGCCCTAATTGCTCTTCTCTTGTTTTCTGAATCCCTCGCTGTTTCGTCCGCTGACTACGGCCCGGATTCGAATTCCTTCAC
CGGAATACTCCGCCGGAATCTGCTCCACCCATCGGGGCGTCGGCGGGAAGATAATAGCGTCGGCTCCAATTTGGCCGAGAAGATCAGTATCAAAAGGGGGGTTCGATCCG
CCGTAATTGCTGGTCGTGCCAGTGGATCGCCGTCCAGCCGGGCACCGCCCTTTCATTTTGGGTCTCTGCTCTGTTTCTGCATCGCCTTTGCGTCTGTTTTGTTATTGTGA
Protein sequenceShow/hide protein sequence
MAAVKPFVSIALIALLLFSESLAVSSADYGPDSNSFTGILRRNLLHPSGRRREDNSVGSNLAEKISIKRGVRSAVIAGRASGSPSSRAPPFHFGSLLCFCIAFASVLLL