; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g06220 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g06220
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type domain-containing protein
Genome locationchr6:4484760..4485603
RNA-Seq ExpressionMoc06g06220
SyntenyMoc06g06220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589799.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4082.14Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHET LASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTK
         KF W+KLNWTK
Subjt:  GKFKWSKLNWTK

KAG7023470.1 hypothetical protein SDJN02_14495 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4082.14Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHET LASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTK
         KF W+KLNWTK
Subjt:  GKFKWSKLNWTK

XP_022134633.1 uncharacterized protein LOC111006855 [Momordica charantia]1.7e-60100Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTKSMVSAGETP
        GKFKWSKLNWTKSMVSAGETP
Subjt:  GKFKWSKLNWTKSMVSAGETP

XP_022921934.1 uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata]2.3e-4183.04Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTK
         KF W+KLNWTK
Subjt:  GKFKWSKLNWTK

XP_023515554.1 uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo]8.7e-4181.98Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP +AAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWT
         KF W+KLNWT
Subjt:  GKFKWSKLNWT

TrEMBL top hitse value%identityAlignment
A0A6J1C2J4 uncharacterized protein LOC1110068558.1e-61100Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTKSMVSAGETP
        GKFKWSKLNWTKSMVSAGETP
Subjt:  GKFKWSKLNWTKSMVSAGETP

A0A6J1E1Y4 uncharacterized protein LOC111430042 isoform X11.1e-4183.04Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWTK
         KF W+KLNWTK
Subjt:  GKFKWSKLNWTK

A0A6J1E765 uncharacterized protein LOC111430042 isoform X22.1e-4081.98Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKLD  AREAKRRLDERLRTQRKS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWT
         K  W+KLNWT
Subjt:  GKFKWSKLNWT

A0A6J1JLN2 uncharacterized protein LOC111485711 isoform X29.1e-3687.23Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVE
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKL   AREAKRRLDERLRTQ KS ++
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVE

A0A6J1JME7 uncharacterized protein LOC111485711 isoform X16.7e-3980.18Show/hide
Query:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG
        MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSLL   DEDDKL   AREAKRRLDERLRTQ KS         
Subjt:  MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRG

Query:  GKFKWSKLNWT
         KF W+K NWT
Subjt:  GKFKWSKLNWT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15580.1 RING/U-box superfamily protein5.3e-1241.38Show/hide
Query:  MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKS
        MAGMLPGVECARRRR H      ++   +   A A    TRR    LYT+NHE+  A     +RS+       D D+KLD  A+EAK+RL++RLR   ++
Subjt:  MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKS

Query:  EVEIGSCRGGKFKWSK
          + G  +G K +  K
Subjt:  EVEIGSCRGGKFKWSK

AT2G15580.2 RING/U-box superfamily protein3.7e-1339.53Show/hide
Query:  MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKS
        MAGMLPGVECARRRR H      ++   +   A A    TRR    LYT+NHE+  A     +RS+       D D+KLD  A+EAK+RL++RLR   ++
Subjt:  MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKS

Query:  EVEIGSCRGGKFKWSKLNWTKSMVSAGET
                G   K   +NW+K  V+   T
Subjt:  EVEIGSCRGGKFKWSKLNWTKSMVSAGET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATGCTTCCTGGAGTAGAGTGTGCTAGAAGAAGACGGTGTCATCAGAACAAAGTATGGTCCGATTCACCAGCGATCGCCGCTCAGGCCCTAACCAGGAGATC
CGTTCTCTGCTTGTACACAAGCAACCACGAAACCCTACTCGCTTCAAATCCATCTCTGAAGAGAAGCCTGTTAGCCGCGGTAGACGAAGACGATAAATTGGACGAAATTG
CGAGAGAGGCGAAGAGGAGGTTGGACGAGCGATTGAGAACGCAGAGGAAATCAGAGGTCGAAATTGGAAGTTGCAGAGGGGGAAAGTTCAAGTGGAGCAAGTTGAATTGG
ACAAAAAGTATGGTGAGTGCTGGTGAGACGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATGCTTCCTGGAGTAGAGTGTGCTAGAAGAAGACGGTGTCATCAGAACAAAGTATGGTCCGATTCACCAGCGATCGCCGCTCAGGCCCTAACCAGGAGATC
CGTTCTCTGCTTGTACACAAGCAACCACGAAACCCTACTCGCTTCAAATCCATCTCTGAAGAGAAGCCTGTTAGCCGCGGTAGACGAAGACGATAAATTGGACGAAATTG
CGAGAGAGGCGAAGAGGAGGTTGGACGAGCGATTGAGAACGCAGAGGAAATCAGAGGTCGAAATTGGAAGTTGCAGAGGGGGAAAGTTCAAGTGGAGCAAGTTGAATTGG
ACAAAAAGTATGGTGAGTGCTGGTGAGACGCCTTGA
Protein sequenceShow/hide protein sequence
MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNW
TKSMVSAGETP