; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g06930 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g06930
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibosome biogenesis regulatory protein
Genome locationchr6:5030328..5032786
RNA-Seq ExpressionMoc06g06930
SyntenyMoc06g06930
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domainsIPR007023 - Ribosomal biogenesis regulatory protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589856.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-15488.75Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++ VD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+R+ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ   KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLK NKK QKK +KKG S KG+AK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

XP_022144805.1 ribosome biogenesis regulatory protein homolog [Momordica charantia]6.0e-177100Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
        MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS

Query:  STSSKLKPNKKPQKKSMKKGVSNKGKAK
        STSSKLKPNKKPQKKSMKKGVSNKGKAK
Subjt:  STSSKLKPNKKPQKKSMKKGVSNKGKAK

XP_022961058.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata]5.2e-15789.97Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ A KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLKPNKK QKK +KKG S KG+AK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

XP_022987784.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima]1.7e-15589.06Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ   KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLKPNKK QKK +KKG S KGKAK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

XP_023515967.1 ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo]1.2e-15689.97Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ   KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILNVNKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLKPNKK QKK +KKG S KG+AK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

TrEMBL top hitse value%identityAlignment
A0A0A0LZY0 Ribosome biogenesis regulatory protein7.2e-14482.62Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        +ENQ   Q+DLGHLMAFNPHH   S PSSRE+LV+ECLQKGTELVQ+IAN+LF LPSTEDRDGPLVRLPPP TRLPREK LPKPKPPTKWELFA+K+GIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDK  YDEQT TWKRRHGYDRANDE+NIPIIEAKMTDE G DPFA R+++K+KRVEKQE NRLQNLKQAAKVGALPSH+QLAATALPITGTQ APKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
        +TKDELGNVAGMAAT+TASGGKFD+K  GEKP KH+GKYRKFLPVVEGTG+GSREREQTE VL+RLISKNSHEILNVNKA+NMYNVK+EK++++ GK SS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS

Query:  STSSKLKPNKKPQKKSMKKGVSNKGKAK
        S SSKLKPNKK QKK +KKG S +GKAK
Subjt:  STSSKLKPNKKPQKKSMKKGVSNKGKAK

A0A6J1CSP0 Ribosome biogenesis regulatory protein2.9e-177100Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
        MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS

Query:  STSSKLKPNKKPQKKSMKKGVSNKGKAK
        STSSKLKPNKKPQKKSMKKGVSNKGKAK
Subjt:  STSSKLKPNKKPQKKSMKKGVSNKGKAK

A0A6J1HAS5 Ribosome biogenesis regulatory protein2.5e-15789.97Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++QVD+GHLMAFNPHHH TSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ A KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLKPNKK QKK +KKG S KG+AK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

A0A6J1HW20 Ribosome biogenesis regulatory protein3.6e-14382.07Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        MENQQ  Q+DLG+LMAFNPHH   S  SSRE+LV+ECLQKG EL Q IAN+LF LPSTEDRDGPLVRLPPP TRLPREK LPKPKPPTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YD+QT +WKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA R++NK+ RVEKQE N+LQNLKQAAKVGALPSHVQLAATALPITGTQ APKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHD-GKPS
        +TKDELGNVAGMAAT+TASGGKFD+KL GEKP KH+GKYRKFLPVVEGTG+GS+EREQTE VLNRLISKNSHEILN+NKA+NMYNVK+EK++++  GK S
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHD-GKPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        S +S+KLKPNKK QKK +KKG S  GKAK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

A0A6J1JJT9 Ribosome biogenesis regulatory protein8.2e-15689.06Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME  Q++QVD+GHLMAF+PHHH TSPP +REELVNECLQKGTELVQAIANELFILPSTEDRDGPLV+L  PKT+LPREK LPKPK PTKWELFAKKRGIK
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
        NRKKDKI YDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPG+DPFA+RQ NKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQ   KK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS
        +TKDELGNVAGMAATATASGGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGSREREQTE VLNRLISKNSHEILN+NKA+NMYNVKREKRRKHD  KPS
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDG-KPS

Query:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK
        SSTSSKLKPNKK QKK +KKG S KGKAK
Subjt:  SSTSSKLKPNKKPQKKSMKKGVSNKGKAK

SwissProt top hitse value%identityAlignment
A1A5P2 Ribosome biogenesis regulatory protein homolog1.1e-2934.45Show/hide
Query:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG
        +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+    +  + RLP P TRLPREK LP+P+P T+W+ FA+ +G
Subjt:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP
        I+ +KK  + +DE +  W+RR GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +PS     +  L  TG Q   
Subjt:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP

Query:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP
           +K+ELG    +A  +TAS G+F  +L  EK P+  GK RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Subjt:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP

Query:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK
            + + K ++K +KK  ++G S + K
Subjt:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK

Q15050 Ribosome biogenesis regulatory protein homolog1.9e-2934.76Show/hide
Query:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG
        +  + +LQ DLG+L+A   NP   L     + E  +    +  T+L   + N+L+ LP+    +  + RLP P TRLPREK LP+P+P T+W+ FA+ +G
Subjt:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP
        I+ +KK  + +DE +  W+RR GY RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  LPS     A  L  TG Q   
Subjt:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP

Query:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP
           +K+ELG    +A  +TAS G+F  +L  EK P+  GK RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Subjt:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP

Query:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK
            + + K ++K ++K  ++G   K K
Subjt:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK

Q2KIH4 Ribosome biogenesis regulatory protein homolog1.9e-2934.06Show/hide
Query:  QLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRK
        +L+ DLG+L+A   NP   L     ++E  +    +  T+L   + N+L+ LP+    +  + RLP P TRLPREK +P+P+P T+W+ FA+ +GI+ +K
Subjt:  QLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRK

Query:  KDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTK
        K  + +DE +  W+RR GY RA D+    +IE     +P  D FA+R   K++RV K E NRL+NL +A K+  LPS     A  +  TG Q      +K
Subjt:  KDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTK

Query:  DELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTS
        +ELG    +A  +TAS G+F  +L  EK P+  GK RKF P+    G  + ER+    +L  + SK     +++ +A N      ++ R+ D       +
Subjt:  DELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTS

Query:  SKLKPNKKPQKKSMKKGVSNKGK
         + K ++K ++K  ++G  +K K
Subjt:  SKLKPNKKPQKKSMKKGVSNKGK

Q9CYH6 Ribosome biogenesis regulatory protein homolog5.1e-3034.45Show/hide
Query:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG
        +  + +L+ DLG+L+A   NP   L     S E  +    +  T+L   + N+L+ LP+    +  + RLP P TRLPREK LP+P+P T+W+ FA+ +G
Subjt:  MENQQQLQVDLGHLMAF--NPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG

Query:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP
        I+ +KK  + +DE +  W+RR GY RA D+    +IE   + +P  D FA+R   K++RV K E NRL+NL +A K+  +PS     +  L  TG Q   
Subjt:  IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAP

Query:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP
           +K+ELG    +A  +TAS G+F  +L  EK P+  GK RKF P+    G  + E++    +L  + SK     L+V +A N      ++ R+ D   
Subjt:  KKMTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKP

Query:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK
            + + K ++K ++K  ++G S K K
Subjt:  SSSTSSKLKPNKKPQKKSMKKGVSNKGK

Q9SH88 Ribosome biogenesis regulatory protein homolog4.2e-10965.2Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE  DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
         RKK+K+ +DEQT  +KRRHGYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPSHVQLAAT+LPI+GT+  PKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
        + KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS

Query:  STSSKLKPNKKPQKKSMKK
          S KLKP K   KK   K
Subjt:  STSSKLKPNKKPQKKSMKK

Arabidopsis top hitse value%identityAlignment
AT2G37990.1 ribosome biogenesis regulatory protein (RRS1) family protein3.0e-11065.2Show/hide
Query:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK
        ME +Q  QVD+G+L+AFNP+H   S PSSR ELV E L +GT+LVQ IAN+LF  PSTE  DGP+V+LPPP T+LPREKH+P+PKPPTKWE FA K+GI+
Subjt:  MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIK

Query:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK
         RKK+K+ +DEQT  +KRRHGYDR ND+ ++PIIEAK +DEPG+DPFA+R  +K+KRV KQE NRLQNLK A K GALPSHVQLAAT+LPI+GT+  PKK
Subjt:  NRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKK

Query:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS
        + KDELG+VAG+AAT+TASGGKFD+KL GEKPPK +GK+ K+LPVV G G  + E+EQT NVL+++ SK+SHEILNV KAINMYNVK+EK++       S
Subjt:  MTKDELGNVAGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSS

Query:  STSSKLKPNKKPQKKSMKK
          S KLKP K   KK   K
Subjt:  STSSKLKPNKKPQKKSMKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATG
TCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAA
GATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGAT
GAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTT
TGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAAC
TAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGT
GGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGA
GCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAAC
ACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCAGCAGCAACTTCAGGTCGACCTTGGTCATCTCATGGCCTTCAATCCTCACCACCATTTAACTTCCCCGCCCTCCTCCAGGGAGGAGCTGGTGAATGAATG
TCTACAGAAAGGTACAGAGCTAGTTCAAGCTATTGCCAATGAACTTTTCATCCTGCCCTCAACTGAAGACAGAGATGGTCCTCTAGTGAGGTTGCCTCCACCTAAAACAA
GATTGCCCAGGGAGAAGCATCTGCCTAAGCCTAAACCTCCTACAAAATGGGAACTCTTTGCTAAAAAACGAGGTATAAAGAATAGGAAAAAGGATAAGATTGCATATGAT
GAACAAACTCAAACATGGAAGCGTCGTCATGGTTACGATCGTGCAAATGATGAGGAGAACATACCTATCATTGAGGCCAAGATGACTGATGAGCCAGGGATGGACCCGTT
TGCTGAAAGACAATCAAATAAGAGAAAACGAGTTGAAAAGCAAGAAAACAATCGCCTACAGAATCTGAAACAAGCCGCAAAAGTTGGTGCTTTACCAAGCCACGTTCAAC
TAGCTGCAACTGCTTTACCCATAACAGGGACGCAAGTTGCACCAAAGAAAATGACAAAAGATGAGCTTGGAAATGTTGCTGGAATGGCAGCAACTGCGACAGCTAGTGGT
GGAAAATTTGACAGGAAGTTGCGAGGAGAAAAGCCTCCAAAGCATAAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACTGGTGTAGGCTCTCGAGAAAGGGA
GCAAACTGAGAATGTCCTGAATCGATTAATATCCAAGAATTCACATGAGATACTAAACGTTAATAAGGCTATCAATATGTACAATGTGAAAAGAGAAAAGAGGCGAAAAC
ACGATGGAAAGCCCTCATCGTCAACATCGAGCAAGTTGAAACCAAATAAGAAACCTCAAAAGAAGTCAATGAAGAAGGGAGTATCGAATAAAGGAAAGGCAAAATGA
Protein sequenceShow/hide protein sequence
MENQQQLQVDLGHLMAFNPHHHLTSPPSSREELVNECLQKGTELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRGIKNRKKDKIAYD
EQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAERQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNVAGMAATATASG
GKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISKNSHEILNVNKAINMYNVKREKRRKHDGKPSSSTSSKLKPNKKPQKKSMKKGVSNKGKAK