; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g08020 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g08020
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTF-B3 domain-containing protein
Genome locationchr6:5799462..5800199
RNA-Seq ExpressionMoc06g08020
SyntenyMoc06g08020
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.1e-3139.75Show/hide
Query:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDG---
        N K    EVYEA + L  M KS+E       P      FP   ++                 ++   V  E+ P  + +  V  EA  +  NNNN+    
Subjt:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDG---

Query:  ----EERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG
             +   +PP+  I+++IG+CS  + K+LT +DV ++QGRLA+ KEFV + L PMFN    +E L  GI VTVY+ EGRE+ MTF++W SKLYVL K 
Subjt:  ----EERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG

Query:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        WK F   N LT     EF+TLWMFRH   H LCFAI+ G    H
Subjt:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3046.63Show/hide
Query:  QPSSSRNKQVNQEAPPDPPNNNN----DGEERRGM--------------PPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNK
        +PS S ++QV+     D  + N     +G+E   +              P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN  
Subjt:  QPSSSRNKQVNQEAPPDPPNNNN----DGEERRGM--------------PPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNK

Query:  DENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG
          +E+  EGI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NNLT    G ++TLWMFRH  TH +CFA+  G
Subjt:  DENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3256.92Show/hide
Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN    +E+  EGI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NN
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        LT    G ++TLWMFRH  TH +CFA+  G
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIILG

XP_022145065.1 putative B3 domain-containing protein At4g03170 [Momordica charantia]5.9e-137100Show/hide
Query:  MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN
        MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN
Subjt:  MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN

Query:  DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK
        DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK
Subjt:  DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK

Query:  PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP
        PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP
Subjt:  PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]8.7e-3239.33Show/hide
Query:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNND----
        N K  +  VYEA++ L  M  S                  + +  F+KP  +   +N+   ++ ++++  ++ P       +  EA    PNNNN+    
Subjt:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNND----

Query:  ---GEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG
           G +   +PP+  I+++IG+CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M FK W SKLYVL K 
Subjt:  ---GEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG

Query:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        W  F K+NNLT    GEF+++WMFRH     LCFAI+ G
Subjt:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein3.0e-3039Show/hide
Query:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAP-PDPPNNNND---
        N K    +VY+A++ LY M+ S                  + V  F++P  +    N+ + + +   V+E+    +     VN+  P  D  N NN+   
Subjt:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAP-PDPPNNNND---

Query:  -----GEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLM
             G ++   PP+  I+++IG+CS  + K+LT +DV + QGRLA+ KEFV   L PMFN   ++E+L +GI V VY+ EGRE+ M FK+WASKLYVL 
Subjt:  -----GEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLM

Query:  KGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG
        K WK F K N+LT    GEF+++WMFRH  T  LCFAI+ G
Subjt:  KGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG

A0A0A0LC65 TF-B3 domain-containing protein1.4e-3056.45Show/hide
Query:  IRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHA
        I+++IG+CS  + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M FK W SKLYVL K W  F K+NNLT    
Subjt:  IRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHA

Query:  GEFLTLWMFRHRRTHGLCFAIILG
        GEF+++WMFRH     LCFAI+ G
Subjt:  GEFLTLWMFRHRRTHGLCFAIILG

A0A2P6P5L3 Putative transcription factor B3-Domain family7.0e-2749.61Show/hide
Query:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN
        +PPVP +R  I  CS+ +EK+LT SDV + Q RLA+ KE V K L P+ N   ENE+LR GI+VT Y+ +G+E+ M FKIW  K++VL +GWK FC  + 
Subjt:  MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANN

Query:  LTHAHAGEFLTLWMFRHRRTHGLCFAIIL
        L      +F+T+WMFR+  T  LCF I L
Subjt:  LTHAHAGEFLTLWMFRHRRTHGLCFAIIL

A0A5D3BAS8 Putative B3 domain-containing protein5.5e-3239.75Show/hide
Query:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDG---
        N K    EVYEA + L  M KS+E       P      FP   ++                 ++   V  E+ P  + +  V  EA  +  NNNN+    
Subjt:  NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDG---

Query:  ----EERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG
             +   +PP+  I+++IG+CS  + K+LT +DV ++QGRLA+ KEFV + L PMFN    +E L  GI VTVY+ EGRE+ MTF++W SKLYVL K 
Subjt:  ----EERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKG

Query:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH
        WK F   N LT     EF+TLWMFRH   H LCFAI+ G    H
Subjt:  WKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNH

A0A6J1CTE7 putative B3 domain-containing protein At4g031702.8e-137100Show/hide
Query:  MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN
        MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN
Subjt:  MGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN

Query:  DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK
        DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK
Subjt:  DGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWK

Query:  PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP
        PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP
Subjt:  PFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILGTPMNHPP

SwissProt top hitse value%identityAlignment
Q9ZR14 Putative B3 domain-containing protein At4g031708.8e-1132.78Show/hide
Query:  KKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPM
        KK++ +  N+H+ +           + R  +V  EA  DP +   D E  R               SR  +K+L  SDV + Q  L + KE V + + P 
Subjt:  KKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPM

Query:  FNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAI
            +++EN  +GI+V+VY  +G+   M FK+W   K  VL  GWK F +   L  +   +F+T+WMFRH +T  LCFAI
Subjt:  FNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031603.2e-1341.59Show/hide
Query:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM
        R   ++L  SDV + Q RL +GKE V K    M +   + E L  +G+ V+VY   G    M  KIW     VL  GWK F K+  L   H  +FLT+WM
Subjt:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM

Query:  FRHRRTHGLCFAI
        FRH++T  +CFAI
Subjt:  FRHRRTHGLCFAI

Arabidopsis top hitse value%identityAlignment
AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)2.3e-1441.59Show/hide
Query:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM
        R   ++L  SDV + Q RL +GKE V K    M +   + E L  +G+ V+VY   G    M  KIW     VL  GWK F K+  L   H  +FLT+WM
Subjt:  RAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENL-REGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWM

Query:  FRHRRTHGLCFAI
        FRH++T  +CFAI
Subjt:  FRHRRTHGLCFAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein6.3e-1232.78Show/hide
Query:  KKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPM
        KK++ +  N+H+ +           + R  +V  EA  DP +   D E  R               SR  +K+L  SDV + Q  L + KE V + + P 
Subjt:  KKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDGEERRGMPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPM

Query:  FNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAI
            +++EN  +GI+V+VY  +G+   M FK+W   K  VL  GWK F +   L  +   +F+T+WMFRH +T  LCFAI
Subjt:  FNNKDENENLREGIEVTVYNREGREFGMTFKIW-ASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGGAAGGATGATAATAAGAAGGAAGAAGACAGTGAAGTGTACGAGGCAGCCATGACTCTTTATATGATGAGTAAGAGCAATGAAGGATCAGTTACGCGATTTCT
TCCAACAAGTCGTCTCACAACATTCCCGCAGGGCGTAACGTTATTTAAGAAGCCCAAAAAGAAAAGGCATTACATCAACGACAACGTCCACAATAACAATAACGTCAACG
TTGACGAAGAACGACAACCATCTTCATCAAGAAACAAACAAGTCAACCAAGAAGCTCCTCCTGATCCACCCAACAACAACAATGACGGCGAAGAGCGTCGGGGGATGCCA
CCGGTGCCGGCGATCAGGGACGTGATCGGGCAGTGCAGCCGGGCGTACGAGAAGAGGCTGACGGTAAGCGACGTGGCGGAGGCGCAAGGGCGGCTGGCGATTGGGAAGGA
ATTCGTGACCAAATATTTGGCTCCAATGTTTAACAACAAGGATGAGAATGAGAATCTGAGAGAGGGAATTGAAGTGACGGTTTATAACAGAGAAGGGAGAGAATTCGGTA
TGACGTTTAAGATTTGGGCTTCAAAATTGTACGTGCTCATGAAAGGGTGGAAGCCGTTCTGCAAAGCCAATAATTTGACGCACGCCCACGCCGGAGAGTTCCTCACTTTA
TGGATGTTTCGCCATCGTCGCACCCACGGCCTCTGTTTTGCCATTATTCTGGGAACACCCATGAACCACCCGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGGAAGGATGATAATAAGAAGGAAGAAGACAGTGAAGTGTACGAGGCAGCCATGACTCTTTATATGATGAGTAAGAGCAATGAAGGATCAGTTACGCGATTTCT
TCCAACAAGTCGTCTCACAACATTCCCGCAGGGCGTAACGTTATTTAAGAAGCCCAAAAAGAAAAGGCATTACATCAACGACAACGTCCACAATAACAATAACGTCAACG
TTGACGAAGAACGACAACCATCTTCATCAAGAAACAAACAAGTCAACCAAGAAGCTCCTCCTGATCCACCCAACAACAACAATGACGGCGAAGAGCGTCGGGGGATGCCA
CCGGTGCCGGCGATCAGGGACGTGATCGGGCAGTGCAGCCGGGCGTACGAGAAGAGGCTGACGGTAAGCGACGTGGCGGAGGCGCAAGGGCGGCTGGCGATTGGGAAGGA
ATTCGTGACCAAATATTTGGCTCCAATGTTTAACAACAAGGATGAGAATGAGAATCTGAGAGAGGGAATTGAAGTGACGGTTTATAACAGAGAAGGGAGAGAATTCGGTA
TGACGTTTAAGATTTGGGCTTCAAAATTGTACGTGCTCATGAAAGGGTGGAAGCCGTTCTGCAAAGCCAATAATTTGACGCACGCCCACGCCGGAGAGTTCCTCACTTTA
TGGATGTTTCGCCATCGTCGCACCCACGGCCTCTGTTTTGCCATTATTCTGGGAACACCCATGAACCACCCGCCCTGA
Protein sequenceShow/hide protein sequence
MMGKDDNKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNVHNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNNDGEERRGMP
PVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTL
WMFRHRRTHGLCFAIILGTPMNHPP