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Moc06g08480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g08480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description40S ribosomal protein S30
Genome locationchr6:6133048..6135838
RNA-Seq ExpressionMoc06g08480
SyntenyMoc06g08480
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0007034 - vacuolar transport (biological process)
GO:0005768 - endosome (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR006846 - Ribosomal protein S30


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9688323.1 hypothetical protein SADUNF_Sadunf02G0185600 [Salix dunnii]1.5e-2596.92Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN A+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL

KAG6589968.1 Vacuolar protein sorting-associated protein 32-like 1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2595.38Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN  +
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL

OWM70352.1 hypothetical protein CDL15_Pgr004489 [Punica granatum]5.6e-2582.5Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEA-LPMIVSC---GIISD
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN    P+ +S    G++ D
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEA-LPMIVSC---GIISD

RWR72560.1 40S ribosomal protein S30 [Cinnamomum micranthum f. kanehirae]5.6e-2577.91Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL--PMIVSCGIISDLLIIIQKL
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN  +   +  + G +  +L+I Q L
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL--PMIVSCGIISDLLIIIQKL

XP_020249382.1 40S ribosomal protein S30 [Asparagus officinalis]5.6e-2598.41Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN+
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENE

TrEMBL top hitse value%identityAlignment
A0A218WE70 40S ribosomal protein S302.7e-2582.5Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEA-LPMIVSC---GIISD
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN    P+ +S    G++ D
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEA-LPMIVSC---GIISD

A0A2I0JYP6 40S ribosomal protein S303.5e-25100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN

A0A314XFR0 40S ribosomal protein S303.5e-25100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN

A0A443N227 40S ribosomal protein S302.7e-2577.91Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL--PMIVSCGIISDLLIIIQKL
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN  +   +  + G +  +L+I Q L
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEAL--PMIVSCGIISDLLIIIQKL

A0A6J5U8A7 40S ribosomal protein S303.5e-25100Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEN

SwissProt top hitse value%identityAlignment
P49689 40S ribosomal protein S305.2e-2696.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

P62860 40S ribosomal protein S306.9e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62861 40S ribosomal protein S306.9e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62862 40S ribosomal protein S306.9e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

P62866 40S ribosomal protein S306.9e-1879.31Show/hide
Query:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS
        KVHGSLARAGKVRGQTPKVAKQ+KKKK  GRA +RMQYNRRFV  V  FGKK+GPN++
Subjt:  KVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS

Arabidopsis top hitse value%identityAlignment
AT2G19750.1 Ribosomal protein S30 family protein3.7e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

AT4G29390.1 Ribosomal protein S30 family protein3.7e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE

AT5G56670.1 Ribosomal protein S30 family protein3.7e-2796.72Show/hide
Query:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE
        MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKR+Q+NRRFVTAVVGFGKKRGPNSSE
Subjt:  MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGTTCACGGATCTCTGGCTCGTGCCGGGAAGGTTAGAGGTCAAACTCCGAAAGTAGCAAAGCAAGACAAGAAGAAGAAGCCCCGTGGACGCGCGCACAAGCG
TATGCAATACAACCGCAGATTCGTCACTGCTGTGGTCGGATTTGGAAAGAAGAGGGGACCCAACTCCTCCGAGAATGAAGCCTTACCAATGATAGTGAGCTGCGGCATCA
TATCTGATCTTCTCATAATTATACAGAAACTGGAGAACAGTGATAAGCTGAAGTCAGGTGACAACAAGTTTGACCTTTATCCACTTGGACCCCCAACCGGAACCTTCAAC
AGCCTGATTTCGAAGAAGTCCAATGCTTGGTTCATGACTTTCATAGCCAAAGATATCACCAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGTTCACGGATCTCTGGCTCGTGCCGGGAAGGTTAGAGGTCAAACTCCGAAAGTAGCAAAGCAAGACAAGAAGAAGAAGCCCCGTGGACGCGCGCACAAGCG
TATGCAATACAACCGCAGATTCGTCACTGCTGTGGTCGGATTTGGAAAGAAGAGGGGACCCAACTCCTCCGAGAATGAAGCCTTACCAATGATAGTGAGCTGCGGCATCA
TATCTGATCTTCTCATAATTATACAGAAACTGGAGAACAGTGATAAGCTGAAGTCAGGTGACAACAAGTTTGACCTTTATCCACTTGGACCCCCAACCGGAACCTTCAAC
AGCCTGATTTCGAAGAAGTCCAATGCTTGGTTCATGACTTTCATAGCCAAAGATATCACCAAGAGTTAA
Protein sequenceShow/hide protein sequence
MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSENEALPMIVSCGIISDLLIIIQKLENSDKLKSGDNKFDLYPLGPPTGTFN
SLISKKSNAWFMTFIAKDITKS