; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g09340 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g09340
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed RNA polymerase III subunit rpc4
Genome locationchr6:6817079..6819765
RNA-Seq ExpressionMoc06g09340
SyntenyMoc06g09340
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007811 - DNA-directed RNA polymerase III subunit RPC4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144123.1 DNA-directed RNA polymerase III subunit RPC4 [Cucumis sativus]1.8e-13282.59Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQ+PPKN T A RK+KFAPKAP RR+PKPEVKAE+ E+ADAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSS+VE M + +SS
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+K S+ RQ  CS+NELPSGS+GKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

XP_008450913.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Cucumis melo]2.8e-13382.94Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDPPKN T   RK+KFAPKAP RR+PKPEVKAE+ E+ DAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPET+VFFLQ+PPMVP+ KQSSTVE M + + S
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+  S+TRQ  CS+NELPSGSMGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAIN+EGKHCCIVGELSKRAILTPDVDSML++IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

XP_022147557.1 DNA-directed RNA polymerase III subunit rpc4 [Momordica charantia]1.7e-159100Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

XP_023529312.1 uncharacterized protein LOC111792200 [Cucurbita pepo subsp. pepo]2.6e-13182.25Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDP KNN  AQRKMKFAPKAPPRR+PK EVKAE++E ADAAQA+DLLKRFNE+T RAKQKVGKKAAPTQVAFG+GGTS+++R+YG  KAGN+ +NEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLPSS  KEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNE EFGEASE+RTYDE+ TTPAMDLGLLE+N ETN+FFLQ+PPMVPVT+QSST E M AA+S 
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+KGS+  Q  C+LNE PSGSMGKLLVYRSGAVKLKLG+IVYDVSSGMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

XP_038878504.1 uncharacterized protein LOC120070724 [Benincasa hispida]2.0e-13685.32Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDPPKN T A RK+KFAPKAP RR+PKPEVKAEI E+ADAAQA+DLLKRFNEST+R KQK+G+KAAPTQVAFGSGGTS+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLPSS SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN  YDE+ TTPAMDLGLLEENPE +VFFLQ+PPMVP+ KQSSTVEG  AA+S 
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQSKGS+ RQ  C +NELPSGSMGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQDVAA+NVEGK CCIVGELSKRAILTPDVDS+LK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

TrEMBL top hitse value%identityAlignment
A0A0A0LWX7 Uncharacterized protein8.7e-13382.59Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQ+PPKN T A RK+KFAPKAP RR+PKPEVKAE+ E+ADAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPE +V FLQ+PPMVP+ KQSS+VE M + +SS
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+K S+ RQ  CS+NELPSGS+GKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAINVEGK CCIVGELSKRAILTPDVDSMLK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

A0A1S3BPR1 DNA-directed RNA polymerase III subunit RPC41.3e-13382.94Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDPPKN T   RK+KFAPKAP RR+PKPEVKAE+ E+ DAAQA+DLLKRFNEST RAKQ+VG+KAAPTQVAFGSGG+S+T+RSYG+ KAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLP+S SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNEEEFGEASEN TYDE+ TT AM+LGLLEENPET+VFFLQ+PPMVP+ KQSSTVE M + + S
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+  S+TRQ  CS+NELPSGSMGKLLVYRSGAVKLKLGDI+YDVSSGMDCGFAQ+VAAIN+EGKHCCIVGELSKRAILTPDVDSML++IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

A0A6J1D2P1 DNA-directed RNA polymerase III subunit rpc48.3e-160100Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

A0A6J1F0U0 DNA-directed RNA polymerase III subunit RPC4-like2.8e-13183.28Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDP KNN  AQRKMKFAPKAPPRR+PK EVKAE++E ADAAQA+DLLKRFNE+T RAKQKVGKKAAPTQVAFG+GGTS+++R+YG  KAGN+ RNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLPS  SKEYVEPWDYYSYYPVTLPLRRPYSG+PDSLNE EFGEASE RTYDE+ TTPAMDLGLLE+NPETN+FFLQ+PPMVPVT+QSST EGM AA+S 
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+K S+  Q  CSLNE PSGSMGKLLVYRSGAVKLKLG+IVYDVSSGMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

A0A6J1HTZ8 uncharacterized protein LOC1114674502.8e-13182.59Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG
        MEQDP KNN  AQRKMKFAPKAPPRR+PK EVKAE++E ADAAQA+DLLKRFNE+T RAKQKVGKKAAPTQVAFG+GGTS+++R++G  KAGN+ RNEDG
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDG

Query:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS
        TLP   S+EYVEPWDYYSYYPVTLPLRRPYSG+PDSLNE EFGEASE+RTYDE+ TTPAMDLGLLE+NPETN+FFLQ+PPMVPVT+QSST EGM AA+S 
Subjt:  TLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSS

Query:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
        EQ+K S+  Q  CSLNE PSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQ++AAINVEGK CCIVGELSKRA+LTPDVDSMLK+IEDL
Subjt:  EQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL

SwissProt top hitse value%identityAlignment
O74857 DNA-directed RNA polymerase III subunit rpc41.3e-0526.9Show/hide
Query:  TYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPV-----TKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNEL-------PSGSMGKLLVYRSGAVKLK
        T  E M     D  +L + P+    F+    + PV      K+    E        +  K  R   N   L  L       P+G +G L V++SG   L+
Subjt:  TYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPV-----TKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNEL-------PSGSMGKLLVYRSGAVKLK

Query:  LGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD
        +G + + V SG DC F Q++A ++ + K    +G   +R I++PD
Subjt:  LGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPD

P05423 DNA-directed RNA polymerase III subunit RPC41.2e-0926.72Show/hide
Query:  ETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAA
        E  + FLQ+P  +          P+  +    +G V     E+ + ++  +N C+L +L  G +GKLL+ +SG V+L LG +  DV+ G  C F Q++ +
Subjt:  ETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAA

Query:  INVEGK---HCCIVGELSKRAILTPDVDSML
        + +         ++G +  + + +PD +S+L
Subjt:  INVEGK---HCCIVGELSKRAILTPDVDSML

Q5E9Z7 DNA-directed RNA polymerase III subunit RPC49.0e-1025.5Show/hide
Query:  DESMTTPAMDLGLLEENPETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDI
        D S+     +L L +E     + FLQ+P  +          P+  +  + +G +     E+ + +R  +N C+L +L  G +GKLL+ +SG V+L LG +
Subjt:  DESMTTPAMDLGLLEENPETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDI

Query:  VYDVSSGMDCGFAQDVAAINVEGKH---CCIVGELSKRAILTPDVDSML
          DV+ G  C F Q++ ++ +         ++G +  + + +P+ +S+L
Subjt:  VYDVSSGMDCGFAQDVAAINVEGKH---CCIVGELSKRAILTPDVDSML

Q8T1V7 DNA-directed RNA polymerase III subunit rpc46.6e-0532.05Show/hide
Query:  SLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEG-----KHCCIVGELSKRAILTPDVDSM
        S+ E+PSG +G L +Y+SG   LK+G + YD+SSG    F ++V     +G       C  +G  S+  +  P +  +
Subjt:  SLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEG-----KHCCIVGELSKRAILTPDVDSM

Q91WD1 DNA-directed RNA polymerase III subunit RPC46.9e-1026.17Show/hide
Query:  DESMTTPAMDLGLLEENPETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDI
        D S+     +L L+++     + FLQ+P  +          PV  +    +G +     E+ + +R  +N C+L +L  G +GKLL+ +SG V+L LG +
Subjt:  DESMTTPAMDLGLLEENPETNVFFLQIPPMV----------PVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDI

Query:  VYDVSSGMDCGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML
          DV+ G  C F Q++ ++ +         ++G +  + + +PD +S+L
Subjt:  VYDVSSGMDCGFAQDVAAINVEGK---HCCIVGELSKRAILTPDVDSML

Arabidopsis top hitse value%identityAlignment
AT4G25180.1 RNA polymerase III RPC42.2e-4035.48Show/hide
Query:  AQRKMKFAPKAPPRRMP-KPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNE-DGTLPSSI---
        ++R+ +  P  P RR+P  P    E  E+ +  +A    ++F+   +  + K   KA+  +VAF    +   IRS+G+PK  ++P ++ + + P+SI   
Subjt:  AQRKMKFAPKAPPRRMP-KPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNE-DGTLPSSI---

Query:  ---------------------SKEYVEPWDY-YSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLE-ENPETNVFFLQIPPMVP
                               +YVEPWDY  SYYP  LPLR+P SGD + L++EEFGE ++NR YDE+    A +LGL   ++ +  +F  +IP  +P
Subjt:  ---------------------SKEYVEPWDY-YSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLE-ENPETNVFFLQIPPMVP

Query:  VTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDV
        V KQ  T       S  E S G            LP G MGK+LVY+SGAVKLK+GD ++DVS G       DV AI+++G++C  +G  +K   +TPDV
Subjt:  VTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDV

Query:  DSMLKDIEDL
        +S+L    D+
Subjt:  DSMLKDIEDL

AT5G09380.1 RNA polymerase III RPC48.8e-6146.94Show/hide
Query:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEE-ADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNED
        MEQ PP       RKMKFAPKAPP+R+PKPEVK E+ E+ +++AQA +LL+R NE ++R K K  KK   +QVA+  G  ++T  +    K  NR     
Subjt:  MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEE-ADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNED

Query:  GTLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASS
        G+  S+   EY EPWDYYSYYP+TLP+RRPY+GDP+ L+ EEF +A  +  +++S+ T A +LGL+E++ E  +FF+++P +   +  +  +E      +
Subjt:  GTLPSSISKEYVEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASS

Query:  SEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL
            KG    +    L  LP G MGKLLVY+SGAVK+KLG+++YDVS G+   FAQDV  +N E K+CC+VG++ K A+LTPD+DS+LKDIE++
Subjt:  SEQSKGSRTRQNFCSLNELPSGSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAACTGCTCAACGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGAATGCCAAAACCTGAAGTCAAAGCAGAAATAAC
AGAGGAAGCTGATGCTGCTCAAGCCAAGGATTTACTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAGAAAGTTGGGAAGAAAGCCGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAGCAACCATAAGATCATATGGTATTCCAAAAGCTGGAAATAGACCCAGAAATGAAGATGGAACTCTTCCGTCTAGTATAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGAGGAGACCATATTCAGGAGATCCAGATTCTCTTAACGAGGAAGAATTTGGAGAGGCTTCAGA
AAACAGAACCTACGATGAAAGTATGACAACTCCAGCAATGGATCTTGGTCTATTGGAGGAGAATCCAGAAACAAATGTCTTTTTTCTACAAATACCACCTATGGTGCCAG
TGACAAAGCAATCTTCTACCGTAGAAGGCATGGTGGCAGCCAGCAGCTCAGAACAAAGTAAGGGTTCACGAACTCGTCAGAACTTCTGCTCTCTGAATGAGTTACCTTCT
GGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGCTAGGCGATATTGTATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGACGT
TGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACTCCAGATGTGGACTCGATGTTAAAGGATATCGAGGATTTAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAGATCCGCCCAAGAACAATACAACTGCTCAACGGAAGATGAAATTTGCTCCAAAAGCACCTCCTCGTCGAATGCCAAAACCTGAAGTCAAAGCAGAAATAAC
AGAGGAAGCTGATGCTGCTCAAGCCAAGGATTTACTAAAGCGCTTCAATGAAAGTACCATGAGGGCAAAGCAGAAAGTTGGGAAGAAAGCCGCACCTACACAAGTTGCAT
TTGGTTCTGGAGGTACATCAGCAACCATAAGATCATATGGTATTCCAAAAGCTGGAAATAGACCCAGAAATGAAGATGGAACTCTTCCGTCTAGTATAAGCAAGGAGTAT
GTAGAACCATGGGATTATTACAGTTATTATCCTGTAACTCTTCCTTTGAGGAGACCATATTCAGGAGATCCAGATTCTCTTAACGAGGAAGAATTTGGAGAGGCTTCAGA
AAACAGAACCTACGATGAAAGTATGACAACTCCAGCAATGGATCTTGGTCTATTGGAGGAGAATCCAGAAACAAATGTCTTTTTTCTACAAATACCACCTATGGTGCCAG
TGACAAAGCAATCTTCTACCGTAGAAGGCATGGTGGCAGCCAGCAGCTCAGAACAAAGTAAGGGTTCACGAACTCGTCAGAACTTCTGCTCTCTGAATGAGTTACCTTCT
GGCTCCATGGGTAAATTGCTTGTATACAGGAGTGGTGCTGTCAAGTTGAAGCTAGGCGATATTGTATATGACGTTTCTTCTGGAATGGATTGTGGCTTTGCACAAGACGT
TGCAGCTATCAATGTGGAAGGGAAGCATTGCTGCATTGTTGGGGAGCTTAGCAAGCGTGCCATTTTAACTCCAGATGTGGACTCGATGTTAAAGGATATCGAGGATTTAT
GA
Protein sequenceShow/hide protein sequence
MEQDPPKNNTTAQRKMKFAPKAPPRRMPKPEVKAEITEEADAAQAKDLLKRFNESTMRAKQKVGKKAAPTQVAFGSGGTSATIRSYGIPKAGNRPRNEDGTLPSSISKEY
VEPWDYYSYYPVTLPLRRPYSGDPDSLNEEEFGEASENRTYDESMTTPAMDLGLLEENPETNVFFLQIPPMVPVTKQSSTVEGMVAASSSEQSKGSRTRQNFCSLNELPS
GSMGKLLVYRSGAVKLKLGDIVYDVSSGMDCGFAQDVAAINVEGKHCCIVGELSKRAILTPDVDSMLKDIEDL