; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g10970 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g10970
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:8316642..8318155
RNA-Seq ExpressionMoc06g10970
SyntenyMoc06g10970
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7561662.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]1.1e-3239.83Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++ L  +P  M  ++W+ +D QV+  I++ LS N+   VAKE T + L+K L D YEKPSAN K+ L    F++ M+EG  V +H+NE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY
           I+N+L  + ++ D++V+A+ L+ SL +SWE M+ AVSNS+G   LKF+ + D  L EE RR +     STS A NV     +     QN+G++K S 
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY

Query:  NGKQQQQRYSRVVGVPMEKVVATGHKRSSIY
        NGK Q +    V      K   TGH +S+ +
Subjt:  NGKQQQQRYSRVVGVPMEKVVATGHKRSSIY

KAG7584790.1 Zinc finger CCHC-type superfamily [Arabidopsis thaliana x Arabidopsis arenosa]3.3e-3239.83Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++ L  +P  M  ++W+ +D QV+  I++ LS N+   VAKE T + L+K L D YEKPSAN K+ L    F++ M+EG  V +H+NE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY
           I+N+L  + ++ D++V+A+ LL SL +SWE M+ AVSNS+G   LKF+ + D  L EE RR +     S S A NV     +     QN+G++K S 
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY

Query:  NGKQQQQRYSRVVGVPMEKVVATGHKRSSIY
        NGK Q +    V      K   TGH +S+ +
Subjt:  NGKQQQQRYSRVVGVPMEKVVATGHKRSSIY

KAG7593230.1 Pentatricopeptide repeat [Arabidopsis thaliana x Arabidopsis arenosa]6.7e-3342.03Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++ L  +P  M  ++W+ +D QV+  I++ LS N+   VAKE T + L+K L D YEKPSAN K+ L    F++ M+EG  V +H+NE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY
           I+N+L  + ++ D++V+A+ LL SL +SWE M+ AVSNS+G   LKF+ + D  L EE RR +     STS A NV     +     QN+G++K S 
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVV----ESALVAQNKGKAKISY

Query:  NGKQQQQ
        NGK Q +
Subjt:  NGKQQQQ

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]1.9e-4374.07Show/hide
Query:  VVATGHKRSSIYVSEFGVAKGSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKG
        VVATGHKRS +YVSEF VAKGSLRQTMH+V   G  R LR PAA+M +TDQKNLPS QVKQLRST+KGN NLIGHRVH SAVR  GEL+KSHRRIS LKG
Subjt:  VVATGHKRSSIYVSEFGVAKGSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKG

Query:  TSHVSSVATDLGGSGKSSGESSFKGRWVRSRKEVT
        T  +SSVAT L GS KSSGESSF+  W+RSR  V+
Subjt:  TSHVSSVATDLGGSGKSSGESSFKGRWVRSRKEVT

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]1.4e-3882.24Show/hide
Query:  GSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKGTSHVSSVATDLGGSGKSSGE
        GSLRQTMHRVA D  GRDL+GP  +M RTDQKNLPSA VKQLRSTEKGN NLIGH+VH SAVRRSGEL+KSHRRIS  KGT  VSSV TDLGGS KSSGE
Subjt:  GSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKGTSHVSSVATDLGGSGKSSGE

Query:  SSFKGRW
        SSFKGRW
Subjt:  SSFKGRW

TrEMBL top hitse value%identityAlignment
A0A0D3AEM1 CCHC-type domain-containing protein3.6e-3244.13Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++ L K+P  M   +W  +D QV+  I++ LS N+   V KE T + L+K L D YEKPSAN+K+ L    F++ M+EG  V +HINE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENV
           I+N+L  + ++ +++V+A+ LL SL +SWE+M+ AVSNS+G   LKF  + D  L+EE RR +    ASTS A NV
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENV

A0A0D3BM55 Uncharacterized protein7.2e-3345.25Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++TL K+P  M   +W  +D QV+  I++ LS N+   VAKE T + L+K L D YEKPSAN K+ L    F++ M+EG  V +H+NE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENV
           I+N+L  + ++ D++V+A+ LL SL +SWE M+ AVSNS+G   LKF  + D  L+EE RR +    ASTS A NV
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENV

A0A3P6FTI2 Abhydrolase_3 domain-containing protein8.0e-3241.46Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE
        MQ++D L  KK+++ L K+P  +   +W  +D QV+  I++ LS N+   VAKE T + L+K L D YEKPSAN K+ L    F++ M+EG  V +H+NE
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINE

Query:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVVESALVAQNK--GKAKISYNG
           I+N+L  + ++ +++V+A+ LL SL +SWE M+ AVSN +G   LKF  + D  L+EE RR +    ASTS A NV        N+  GK+K S NG
Subjt:  LTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVVESALVAQNK--GKAKISYNG

Query:  KQQQQ
        + Q +
Subjt:  KQQQQ

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL69.1e-4474.07Show/hide
Query:  VVATGHKRSSIYVSEFGVAKGSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKG
        VVATGHKRS +YVSEF VAKGSLRQTMH+V   G  R LR PAA+M +TDQKNLPS QVKQLRST+KGN NLIGHRVH SAVR  GEL+KSHRRIS LKG
Subjt:  VVATGHKRSSIYVSEFGVAKGSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKG

Query:  TSHVSSVATDLGGSGKSSGESSFKGRWVRSRKEVT
        T  +SSVAT L GS KSSGESSF+  W+RSR  V+
Subjt:  TSHVSSVATDLGGSGKSSGESSFKGRWVRSRKEVT

A0A6J1DVE9 uncharacterized protein LOC1110238706.7e-3982.24Show/hide
Query:  GSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKGTSHVSSVATDLGGSGKSSGE
        GSLRQTMHRVA D  GRDL+GP  +M RTDQKNLPSA VKQLRSTEKGN NLIGH+VH SAVRRSGEL+KSHRRIS  KGT  VSSV TDLGGS KSSGE
Subjt:  GSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKGTSHVSSVATDLGGSGKSSGE

Query:  SSFKGRW
        SSFKGRW
Subjt:  SSFKGRW

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.1e-0521.95Show/hide
Query:  QVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINEL
        +++ LL  + + K +        D  W + +    + I   LS +  +    + TA+ +L+ L   YE+ S  +++ L     ++ +    S+ SH +  
Subjt:  QVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINEL

Query:  TDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRK
         +++++L   G KI+E  K   LL++L   ++ + TA+  +L E +L    + +  L +E + K
Subjt:  TDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-1629.94Show/hide
Query:  QVKDLLTCKKIYKTL---GKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHI
        +++DLL  + ++K L    K+P  M  +DW ++DE+  + I++ LS ++ + +  E TA+ +   L+  Y   +   K+ L    + +HM EGT+  SH+
Subjt:  QVKDLLTCKKIYKTL---GKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHI

Query:  NELTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRK
        N    ++ +L  +GVKI+E+ KA+ LL SL  S++ + T + +  G+ +++   +  A L  E  RK
Subjt:  NELTDILNKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRK

Arabidopsis top hitse value%identityAlignment
AT3G29785.1 unknown protein3.8e-1039.74Show/hide
Query:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKIL
        M+++D L  KK+++ LGK+   M   DWN +  QV+  I++ +S NI   VAKE +   L+K L D Y+KPS N  ++
Subjt:  MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTAAAAGATCTTCTTACATGCAAGAAGATATACAAGACTTTAGGGAAGAGACCAGCAGGGATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGTC
GTTGCCAACATCAAAATGGCATTATCAATGAATATTTGTAGTCTGGTGGCGAAAGAGACTACAGCGAAAGATTTGTTGAAGGCCTTGCAGGACAGGTATGAAAAA
CCTTCTGCCAATACAAAGATACTTCTATGGACGAACTATTTTAATATCCACATGGATGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTG
AACAAGTTAGAAGGGATGGGTGTCAAGATTGACGAGCAGGTGAAAGCTATGAGGCTGTTGATGTCTTTGCTTGACAGTTGGGAGACGATGAAGACCGCAGTGTCG
AATTCGCTAGGGGAAAATAGCTTGAAATTTATAGCTATTTGTGATGCCGCCTTATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATGTCTGCATCTACTTCAGGG
GCAGAAAACGTGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAAGCAAAGATTAGTTACAACGGGAAGCAGCAGCAGCAGAGATATAGCAGGGTAGTGGGA
GTTCCAATGGAGAAGGTGGTGGCAACAGGCCACAAGAGATCTTCTATTTATGTGTCAGAATTCGGGGTTGCCAAGGGTTCACTGAGACAGACGATGCACAGAGTA
GCAGGAGATGGTTTAGGGCGAGACCTTAGAGGACCAGCAGCAATGATGGTCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACA
GAAAAGGGAAACAGGAATTTGATAGGCCATCGAGTTCATATCTCAGCTGTCAGACGTTCAGGCGAGCTGATGAAGTCGCATAGGCGAATTAGTGTATTGAAGGGT
ACGAGTCATGTTTCTAGTGTGGCGACAGACTTGGGTGGAAGCGGCAAGTCATCAGGGGAATCTTCCTTTAAAGGTCGTTGGGTTCGATCGAGAAAGGAAGTGACG
GGGACCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTAAAAGATCTTCTTACATGCAAGAAGATATACAAGACTTTAGGGAAGAGACCAGCAGGGATGCCGGACAAGGATTGGAATGAGATGGATGAGCAGGTC
GTTGCCAACATCAAAATGGCATTATCAATGAATATTTGTAGTCTGGTGGCGAAAGAGACTACAGCGAAAGATTTGTTGAAGGCCTTGCAGGACAGGTATGAAAAA
CCTTCTGCCAATACAAAGATACTTCTATGGACGAACTATTTTAATATCCACATGGATGAGGGAACCTCGGTGAATTCCCACATTAATGAACTCACCGATATCTTG
AACAAGTTAGAAGGGATGGGTGTCAAGATTGACGAGCAGGTGAAAGCTATGAGGCTGTTGATGTCTTTGCTTGACAGTTGGGAGACGATGAAGACCGCAGTGTCG
AATTCGCTAGGGGAAAATAGCTTGAAATTTATAGCTATTTGTGATGCCGCCTTATCTGAGGAAGCCCGGAGAAAATTAGGGAAAATGTCTGCATCTACTTCAGGG
GCAGAAAACGTGGTTGAATCAGCTTTGGTAGCTCAGAACAAAGGGAAAGCAAAGATTAGTTACAACGGGAAGCAGCAGCAGCAGAGATATAGCAGGGTAGTGGGA
GTTCCAATGGAGAAGGTGGTGGCAACAGGCCACAAGAGATCTTCTATTTATGTGTCAGAATTCGGGGTTGCCAAGGGTTCACTGAGACAGACGATGCACAGAGTA
GCAGGAGATGGTTTAGGGCGAGACCTTAGAGGACCAGCAGCAATGATGGTCAGAACAGATCAGAAGAATCTGCCATCAGCTCAAGTAAAACAGTTGAGAAGTACA
GAAAAGGGAAACAGGAATTTGATAGGCCATCGAGTTCATATCTCAGCTGTCAGACGTTCAGGCGAGCTGATGAAGTCGCATAGGCGAATTAGTGTATTGAAGGGT
ACGAGTCATGTTTCTAGTGTGGCGACAGACTTGGGTGGAAGCGGCAAGTCATCAGGGGAATCTTCCTTTAAAGGTCGTTGGGTTCGATCGAGAAAGGAAGTGACG
GGGACCACTTAG
Protein sequenceShow/hide protein sequence
MQVKDLLTCKKIYKTLGKRPAGMPDKDWNEMDEQVVANIKMALSMNICSLVAKETTAKDLLKALQDRYEKPSANTKILLWTNYFNIHMDEGTSVNSHINELTDIL
NKLEGMGVKIDEQVKAMRLLMSLLDSWETMKTAVSNSLGENSLKFIAICDAALSEEARRKLGKMSASTSGAENVVESALVAQNKGKAKISYNGKQQQQRYSRVVG
VPMEKVVATGHKRSSIYVSEFGVAKGSLRQTMHRVAGDGLGRDLRGPAAMMVRTDQKNLPSAQVKQLRSTEKGNRNLIGHRVHISAVRRSGELMKSHRRISVLKG
TSHVSSVATDLGGSGKSSGESSFKGRWVRSRKEVTGTT