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Moc06g11070 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g11070
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:8418295..8421463
RNA-Seq ExpressionMoc06g11070
SyntenyMoc06g11070
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154404.1 uncharacterized protein LOC111021681 [Momordica charantia]5.9e-1282.61Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        MM++DT AP WMDPIVEFIKGNP  DSKE KKMAR+AARFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
XP_022155184.1 uncharacterized protein LOC111022318 [Momordica charantia]1.0e-1178.26Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        +M++DT AP+WMDPIVEFIKGNP QDSKE KKMAR+  RFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
XP_022157434.1 uncharacterized protein LOC111024132 [Momordica charantia]7.0e-1386.96Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        MMDIDTS PTW DPI+EFIK NP QD KEHKKMARRAARFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
XP_022157610.1 uncharacterized protein LOC111024267 [Momordica charantia]1.8e-1377.55Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGAFTS
        +MD+D +AP WMDP+VEFIKGNP QDSKEHKKMARRAA+F+LRDGA  S
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGAFTS
XP_022158092.1 uncharacterized protein LOC111024661 [Momordica charantia]1.3e-1180Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDG
        +M+IDT +P+WMDPI+EFIKGNP QDSKE K+MARRAARFILRDG
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDG
TrEMBL top hitse value%identityAlignment
A0A6J1DM02 uncharacterized protein LOC1110216812.9e-1282.61Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        MM++DT AP WMDPIVEFIKGNP  DSKE KKMAR+AARFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
A0A6J1DPI3 Ribonuclease H4.9e-1278.26Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        +M++DT AP+WMDPIVEFIKGNP QDSKE KKMAR+  RFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
A0A6J1DTK4 uncharacterized protein LOC1110242678.9e-1477.55Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGAFTS
        +MD+D +AP WMDP+VEFIKGNP QDSKEHKKMARRAA+F+LRDGA  S
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGAFTS
A0A6J1DWA1 Ribonuclease H6.4e-1280Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDG
        +M+IDT +P+WMDPI+EFIKGNP QDSKE K+MARRAARFILRDG
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDG
A0A6J1DWH1 uncharacterized protein LOC1110241323.4e-1386.96Show/hide
Query:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
        MMDIDTS PTW DPI+EFIK NP QD KEHKKMARRAARFILRDGA
Subjt:  MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGACATTGACACATCAGCACCCACATGGATGGATCCAATTGTGGAATTCATTAAAGGAAACCCATCGCAAGACTCAAAAGAACATAAGAAGATGGCGCGA
AGAGCAGCTCGGTTCATACTCCGAGATGGAGCATTCACCTCGAGCTTAATATTGAGTCCGATCTATATTAACTTGATCGTCGGAGAGTTCGCTCTCTTGTGCAGG
TTCACTCTGAGGTTCAGGTCGAGCCGGAGACCGGTGTTGAGGGAGAAATCCGGGCAAGACATGTGTATGGAATCGGGAGCAACAGTGAGGAGCGGGGCCACAGAC
GGTTATCACTGTACTCTGCACAGACGTATAAGTGCGTCACCACTACTGTTGTACGAAGGGGACACCGAGGATTATAGTGTGAAACCCATGAACGACAGGCGAGAC
ACCGCACCGGTGTTCGAGTTCTCTTGTTACAGGTTCATTTGCCCTTTGGAGTATACACTCACGGTGGCCAGATTTCTATCCCCGTTGGATGATGATAGTGTTGTT
GCAGTTAACGAAATTAAAGTCAACATTGTTACATATGGGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGACATTGACACATCAGCACCCACATGGATGGATCCAATTGTGGAATTCATTAAAGGAAACCCATCGCAAGACTCAAAAGAACATAAGAAGATGGCGCGA
AGAGCAGCTCGGTTCATACTCCGAGATGGAGCATTCACCTCGAGCTTAATATTGAGTCCGATCTATATTAACTTGATCGTCGGAGAGTTCGCTCTCTTGTGCAGG
TTCACTCTGAGGTTCAGGTCGAGCCGGAGACCGGTGTTGAGGGAGAAATCCGGGCAAGACATGTGTATGGAATCGGGAGCAACAGTGAGGAGCGGGGCCACAGAC
GGTTATCACTGTACTCTGCACAGACGTATAAGTGCGTCACCACTACTGTTGTACGAAGGGGACACCGAGGATTATAGTGTGAAACCCATGAACGACAGGCGAGAC
ACCGCACCGGTGTTCGAGTTCTCTTGTTACAGGTTCATTTGCCCTTTGGAGTATACACTCACGGTGGCCAGATTTCTATCCCCGTTGGATGATGATAGTGTTGTT
GCAGTTAACGAAATTAAAGTCAACATTGTTACATATGGGCTGTGA
Protein sequenceShow/hide protein sequence
MMDIDTSAPTWMDPIVEFIKGNPSQDSKEHKKMARRAARFILRDGAFTSSLILSPIYINLIVGEFALLCRFTLRFRSSRRPVLREKSGQDMCMESGATVRSGATD
GYHCTLHRRISASPLLLYEGDTEDYSVKPMNDRRDTAPVFEFSCYRFICPLEYTLTVARFLSPLDDDSVVAVNEIKVNIVTYGL