; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g11370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g11370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr6:8623293..8624063
RNA-Seq ExpressionMoc06g11370
SyntenyMoc06g11370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]2.3e-5173.25Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HL PV++ HPE    E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
         TP GVITR EFDQL+ K DAQVEALKAKCE+KE S +DGDLG S FTSD+LEA IP
Subjt:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]3.4e-3495.35Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLG S FTSDVLEAPIP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

XP_022155128.1 uncharacterized protein LOC111022267 [Momordica charantia]4.5e-3175.73Show/hide
Query:  EGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAP
        E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR EFDQL+ K DAQVEALKA CE+KE S +DGDLG   FT D+LEAP
Subjt:  EGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAP

Query:  IPP
        I P
Subjt:  IPP

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]3.2e-3757.76Show/hide
Query:  MAAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        M AMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H DPV+E+H             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MAAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIPP
        +NP  P GVITR EF+QL+ K DAQVEALK +CE+KE + +DGDLG S FTSD+LEA IPP
Subjt:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIPP

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]3.8e-7061.57Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDSLATEPHRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGSAPAPPSENFDALQREMAAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+ L TEP  RSARIT   L PAHP+  KA RGRGG S++   G+APAP  ENFDALQ+EM AMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDSLATEPHRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGSAPAPPSENFDALQREMAAMR

Query:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
        P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDLG S FTSD+LEA IP
Subjt:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

TrEMBL top hitse value%identityAlignment
A0A6J1DDS5 uncharacterized protein LOC1110198421.6e-3495.35Show/hide
Query:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
        +RGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITR EFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLG S FTSDVLEAPIP
Subjt:  KRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

A0A6J1DDW5 uncharacterized protein LOC1110196341.1e-5173.25Show/hide
Query:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP
        MRTQM +ME+MY+EM+ AAGA SRSENR+ R D+ EQRG HL PV++ HPE    E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP
Subjt:  MRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNP

Query:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
         TP GVITR EFDQL+ K DAQVEALKAKCE+KE S +DGDLG S FTSD+LEA IP
Subjt:  ATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

A0A6J1DM55 uncharacterized protein LOC1110222672.2e-3175.73Show/hide
Query:  EGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAP
        E +T QRGDLREHLNRKR SSLRKGQSPS SHR+SNQQAESS+NP TP  VITR EFDQL+ K DAQVEALKA CE+KE S +DGDLG   FT D+LEAP
Subjt:  EGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAP

Query:  IPP
        I P
Subjt:  IPP

A0A6J1DPN4 uncharacterized protein LOC1110230601.6e-3757.76Show/hide
Query:  MAAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS
        M AMRTQMR+MEEMYN+M+  AGA SRS +++   D+ EQ   H DPV+E+H             GDLR+HLNRKR SS R  ++ +  H++SNQQAESS
Subjt:  MAAMRTQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESS

Query:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIPP
        +NP  P GVITR EF+QL+ K DAQVEALK +CE+KE + +DGDLG S FTSD+LEA IPP
Subjt:  HNPATPAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIPP

A0A6J1DZJ1 uncharacterized protein LOC1110257381.8e-7061.57Show/hide
Query:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDSLATEPHRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGSAPAPPSENFDALQREMAAMR
        MVQP +STNT DRR L A+D HQREVGA VVEGQ H+ L TEP  RSARIT   L PAHP+  KA RGRGG S++   G+APAP  ENFDALQ+EM AMR
Subjt:  MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDSLATEPHRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGSAPAPPSENFDALQREMAAMR

Query:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT
        TQM +MEEMYNEM+ A GAGSRSE+R  R                             +RGDLR+HL+RKR SSLRKG+SPS SH++SNQQAESS+NP  
Subjt:  TQMRSMEEMYNEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPAT

Query:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP
        P GVITR EFDQL+ K DAQVE LKA+CE K  + +DGDLG S FTSD+LEA IP
Subjt:  PAGVITRAEFDQLRGKLDAQVEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTTTAGCTGCCAGCGATGCCCATCAGAGGGAGGTTGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGA
CAGCCTAGCAACAGAACCCCACCGCAGGTCGGCACGAATCACCGCGTCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTTCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGCGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGACCCAGTCGAGGAGAAACA
TCCCGAAGACAACGGGAGCGAGGGACACACTCGCCAGAGAGGAGACCTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTAAACGATGGCGACTTGGGAGGATCGTCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCAAACTCGACCAATACGGCAGATCGAAGGACTTTAGCTGCCAGCGATGCCCATCAGAGGGAGGTTGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGA
CAGCCTAGCAACAGAACCCCACCGCAGGTCGGCACGAATCACCGCGTCTGTCCTACCACCTGCGCACCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGGACCTCTA
AGAAGGGCGCCCGGGGTTCAGCCCCGGCTCCACCAAGTGAGAACTTTGACGCACTCCAGAGAGAAATGGCGGCAATGCGCACACAAATGCGGTCCATGGAGGAAATGTAT
AACGAGATGATACTAGCTGCAGGCGCAGGGTCCCGATCTGAAAATCGAATGACGCGCATTGACATACGCGAGCAAAGGGGTTCCCACCTCGACCCAGTCGAGGAGAAACA
TCCCGAAGACAACGGGAGCGAGGGACACACTCGCCAGAGAGGAGACCTTCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCT
CACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCACAACCCAGCAACTCCCGCAGGGGTGATCACAAGGGCGGAGTTCGACCAGCTGAGGGGCAAGCTCGACGCTCAG
GTGGAGGCCTTAAAGGCCAAATGTGAGCAGAAAGAAGGTTCACTAAACGATGGCGACTTGGGAGGATCGTCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGTA
G
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRTLAASDAHQREVGAAVVEGQGHDSLATEPHRRSARITASVLPPAHPRTSKATRGRGGTSKKGARGSAPAPPSENFDALQREMAAMRTQMRSMEEMY
NEMILAAGAGSRSENRMTRIDIREQRGSHLDPVEEKHPEDNGSEGHTRQRGDLREHLNRKRGSSLRKGQSPSRSHRSSNQQAESSHNPATPAGVITRAEFDQLRGKLDAQ
VEALKAKCEQKEGSLNDGDLGGSSFTSDVLEAPIPP