; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g11690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g11690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPolyprotein
Genome locationchr6:8831719..8832465
RNA-Seq ExpressionMoc06g11690
SyntenyMoc06g11690
Gene Ontology termsNA
InterPro domainsIPR028919 - Viral movement protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051217.1 polyprotein [Cucumis melo var. makuwa]3.0e-6472.25Show/hide
Query:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP++   +++R  TM N+G++QIGVKTLT KI SNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

KAG6588194.1 hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia]8.2e-6254.51Show/hide
Query:  MPQFSKPCWISNIGGGS--HALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNV
        M  F KPCW S   GG   HALD EEFIKKGNNLLNWKIPKVPT+KIYK   F   SDPSIKT + +++CGNG+QA  LI ++P I  L+ +R Y+MFNV
Subjt:  MPQFSKPCWISNIGGGS--HALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNV

Query:  GLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQ
        G++QIG KTLTKKIP NA+I LCV DTR EK EDSILG+VEA L                                         T+PI +  RTCYK Q
Subjt:  GLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQ

Query:  GSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKVI
         SA  +AL+ES  G+TVFFQTDFENS+VAV KVS WD+V+ KV+
Subjt:  GSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKVI

KGN66494.1 hypothetical protein Csa_006902 [Cucumis sativus]2.1e-8968.8Show/hide
Query:  CWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKT
        CW SN GGGSH+LD+EE+IKKG NLL WKIPK+PTTKIYK   F  FSDP IKT E  + C NGSQ FRLI+ NP++D  +++R YT  N+G++QIGVKT
Subjt:  CWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKT

Query:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALL
        LT KIPSNASIILCV DTR +  EDSILG+VE+ L DGP++FNIFPNITM +FHPKL ++ VL  +V+GFEQLP GT PIS+M RTCYK Q SA P AL+
Subjt:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALL

Query:  ESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV
        ESPQGKTVFFQT+FENS VA QKVS+WDEV+ KV
Subjt:  ESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV

TYK18873.1 polyprotein [Cucumis melo var. makuwa]3.6e-6572.83Show/hide
Query:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP++   +++R  TM N+G++QIGVKTLT KIPSNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

XP_038880673.1 uncharacterized protein LOC120072292 [Benincasa hispida]6.5e-7562.66Show/hide
Query:  MPQFSKPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGL
        M    KPC  SN GGGSHALD+EE+IKKGNNLL WKIPKVPTTKIYK+  FT FSDPSIKT E K+SC NGSQAFRLIA+NP++    D R YT  NVG+
Subjt:  MPQFSKPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGL

Query:  LQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGS
        +QIGVK +T KIPSNASIILCV D+R E  ED+ILG+VE++L                                 GFEQLP GT+PIS+M RTCYK Q S
Subjt:  LQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGS

Query:  AAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV
        A P+ALLESPQGKTV+FQTD +NS VAVQKVSKWDEVV K+
Subjt:  AAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV

TrEMBL top hitse value%identityAlignment
A0A0A0LXM3 Uncharacterized protein1.6e-5547.58Show/hide
Query:  MPQFSKPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKS------FTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRL--
        M  F K C   N   G H+L+ EE+++KG +L+ WK+P+VP  KIY+++       F S +DPSI+T EG++S GN   +F+L  Q P     + RR+  
Subjt:  MPQFSKPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKS------FTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRL--

Query:  YTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSR
        +   N+GL+QIGVKTLTKKIP NASIILC+ D R EKLEDS+L +VE+ L DGP YFN+FPNI +S+F   +++ L ++V+V+G +++P G+ PI V  R
Subjt:  YTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSR

Query:  TCYKF-QGSAAPDALLESPQGKTVFFQTDF--ENSNVAVQKVSKWDEV
        TCYK  Q     +AL+ESP GKTVFFQ +   ++ +  VQKV+ W++V
Subjt:  TCYKF-QGSAAPDALLESPQGKTVFFQTDF--ENSNVAVQKVSKWDEV

A0A0A0LZS0 Uncharacterized protein1.0e-8968.8Show/hide
Query:  CWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKT
        CW SN GGGSH+LD+EE+IKKG NLL WKIPK+PTTKIYK   F  FSDP IKT E  + C NGSQ FRLI+ NP++D  +++R YT  N+G++QIGVKT
Subjt:  CWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKT

Query:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALL
        LT KIPSNASIILCV DTR +  EDSILG+VE+ L DGP++FNIFPNITM +FHPKL ++ VL  +V+GFEQLP GT PIS+M RTCYK Q SA P AL+
Subjt:  LTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALL

Query:  ESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV
        ESPQGKTVFFQT+FENS VA QKVS+WDEV+ KV
Subjt:  ESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQKV

A0A5A7U9X3 Polyprotein1.5e-6472.25Show/hide
Query:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP++   +++R  TM N+G++QIGVKTLT KI SNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

A0A5D3D5V1 Polyprotein1.7e-6572.83Show/hide
Query:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA
        C NGSQAFRLI  NP++   +++R  TM N+G++QIGVKTLT KIPSNASIILCV DTR +  EDSILG+VEA L DGP++FNIFPNITMS+FHPKL ++
Subjt:  CGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDA

Query:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK
        LVL  +V+GFEQLP GT PIS+M RTCYK QGSA P AL+ESPQGKTVFFQTDFENS VAVQKVS+WDEVV K
Subjt:  LVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTDFENSNVAVQKVSKWDEVVQK

A5C0V2 Uncharacterized protein7.6e-2938.1Show/hide
Query:  NNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEK
        N+L +WK+PKV   +IYKK +F  F+D +IKT E  VS     Q  RL+  N  ID  K R  Y   + G++Q+  K LT ++  N SI++C+ D R  +
Subjt:  NNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTKKIPSNASIILCVCDTRCEK

Query:  LEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYK-FQGSAAPDALLESPQGKTVFFQTD-FENSNVA
          DSI+G V+A L DGP+YF  +PN T+ +    + D++VL++   GF+  P G  P+S+++R  YK    S    AL  SP+G+T +F +D  + S+  
Subjt:  LEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYK-FQGSAAPDALLESPQGKTVFFQTD-FENSNVA

Query:  VQKVSKWDEV
        + K   W +V
Subjt:  VQKVSKWDEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACAGTTTTCCAAACCCTGTTGGATCTCAAACATTGGAGGAGGAAGCCATGCTCTGGACACAGAAGAATTCATCAAAAAGGGGAACAATCTATTGAACTGGAAAAT
CCCCAAGGTACCCACAACCAAAATCTACAAAAAAAAGTCCTTCACTTCCTTCTCTGATCCCTCCATAAAAACCATAGAAGGGAAAGTCTCTTGTGGAAATGGCAGCCAAG
CCTTCAGATTGATAGCTCAAAATCCCTTAATTGATGGCCTAAAGGACAGGAGACTCTACACCATGTTCAATGTGGGGCTGCTCCAAATTGGGGTCAAAACTTTAACCAAA
AAAATTCCCTCAAATGCCTCAATTATTCTCTGTGTTTGTGACACTCGCTGTGAGAAGCTTGAAGATTCGATTTTGGGAGTGGTGGAAGCTAGTCTAAGGGATGGCCCTTT
GTATTTCAACATATTTCCAAACATTACCATGTCTGTGTTTCATCCCAAGTTGTCGGATGCTTTGGTTTTGAATGTCATTGTCGAGGGTTTTGAGCAGCTCCCTGTGGGGA
CACAGCCCATTAGTGTAATGTCTAGGACTTGTTATAAGTTTCAAGGGAGTGCAGCTCCTGATGCCCTTCTTGAGAGCCCACAAGGGAAAACTGTGTTTTTTCAGACAGAT
TTTGAGAACTCCAATGTTGCTGTTCAGAAGGTCTCAAAATGGGATGAAGTTGTCCAAAAAGTCATCTACTCTTGTGCTGCAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACAGTTTTCCAAACCCTGTTGGATCTCAAACATTGGAGGAGGAAGCCATGCTCTGGACACAGAAGAATTCATCAAAAAGGGGAACAATCTATTGAACTGGAAAAT
CCCCAAGGTACCCACAACCAAAATCTACAAAAAAAAGTCCTTCACTTCCTTCTCTGATCCCTCCATAAAAACCATAGAAGGGAAAGTCTCTTGTGGAAATGGCAGCCAAG
CCTTCAGATTGATAGCTCAAAATCCCTTAATTGATGGCCTAAAGGACAGGAGACTCTACACCATGTTCAATGTGGGGCTGCTCCAAATTGGGGTCAAAACTTTAACCAAA
AAAATTCCCTCAAATGCCTCAATTATTCTCTGTGTTTGTGACACTCGCTGTGAGAAGCTTGAAGATTCGATTTTGGGAGTGGTGGAAGCTAGTCTAAGGGATGGCCCTTT
GTATTTCAACATATTTCCAAACATTACCATGTCTGTGTTTCATCCCAAGTTGTCGGATGCTTTGGTTTTGAATGTCATTGTCGAGGGTTTTGAGCAGCTCCCTGTGGGGA
CACAGCCCATTAGTGTAATGTCTAGGACTTGTTATAAGTTTCAAGGGAGTGCAGCTCCTGATGCCCTTCTTGAGAGCCCACAAGGGAAAACTGTGTTTTTTCAGACAGAT
TTTGAGAACTCCAATGTTGCTGTTCAGAAGGTCTCAAAATGGGATGAAGTTGTCCAAAAAGTCATCTACTCTTGTGCTGCAGAGTAG
Protein sequenceShow/hide protein sequence
MPQFSKPCWISNIGGGSHALDTEEFIKKGNNLLNWKIPKVPTTKIYKKKSFTSFSDPSIKTIEGKVSCGNGSQAFRLIAQNPLIDGLKDRRLYTMFNVGLLQIGVKTLTK
KIPSNASIILCVCDTRCEKLEDSILGVVEASLRDGPLYFNIFPNITMSVFHPKLSDALVLNVIVEGFEQLPVGTQPISVMSRTCYKFQGSAAPDALLESPQGKTVFFQTD
FENSNVAVQKVSKWDEVVQKVIYSCAAE