; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g11700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g11700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr6:8843977..8846039
RNA-Seq ExpressionMoc06g11700
SyntenyMoc06g11700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151295.1 uncharacterized protein LOC111019259 [Momordica charantia]2.6e-2060.55Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MS SIIALL+ + LN E+YKQ KSNLN IL+I+DLR                          IKANDKA+VYIL SISNVLAKKH++ VTAKEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQ SSQA
Subjt:  MFGQPSSQA

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.2e-2769.72Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDL-------------------------RLIKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MSTSIIALL+AQ LNGE+YKQWKSNLNTIL+IDDL                         R IKANDKAKVYILASIS+VLAKKH+DT+TAKEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDL-------------------------RLIKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPSSQA
Subjt:  MFGQPSSQA

XP_022156751.1 uncharacterized protein LOC111023591 [Momordica charantia]5.9e-2058.65Show/hide
Query:  IALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQSMFGQP
        IALL+A+ LN ++Y QWK+NLNTIL++DDLR                          IKANDKAK+YILA+ISNVLAKKHK  VTA+EIMDSLQ MFGQP
Subjt:  IALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQSMFGQP

Query:  SSQA
        S QA
Subjt:  SSQA

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]5.7e-2364.22Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MSTSII LL AQ LN E+YKQWKSN+NTILMIDDLR                          IKANDKAKV ILASIS+VLAKKH+++V  KEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPSSQA
Subjt:  MFGQPSSQA

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]2.7e-2566.06Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MS SIIALL+AQ LNGE+Y+QWKSNLNTIL+IDDLR                          IK+NDKAKVYILASIS+VLAKKH+DTVT KEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPS QA
Subjt:  MFGQPSSQA

TrEMBL top hitse value%identityAlignment
A0A6J1DAT1 uncharacterized protein LOC1110192591.3e-2060.55Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MS SIIALL+ + LN E+YKQ KSNLN IL+I+DLR                          IKANDKA+VYIL SISNVLAKKH++ VTAKEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQ SSQA
Subjt:  MFGQPSSQA

A0A6J1DFZ2 uncharacterized protein LOC1110200951.1e-2769.72Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDL-------------------------RLIKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MSTSIIALL+AQ LNGE+YKQWKSNLNTIL+IDDL                         R IKANDKAKVYILASIS+VLAKKH+DT+TAKEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDL-------------------------RLIKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPSSQA
Subjt:  MFGQPSSQA

A0A6J1DVX8 uncharacterized protein LOC1110235912.9e-2058.65Show/hide
Query:  IALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQSMFGQP
        IALL+A+ LN ++Y QWK+NLNTIL++DDLR                          IKANDKAK+YILA+ISNVLAKKHK  VTA+EIMDSLQ MFGQP
Subjt:  IALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQSMFGQP

Query:  SSQA
        S QA
Subjt:  SSQA

A0A6J1DW68 uncharacterized protein LOC1110246372.8e-2364.22Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MSTSII LL AQ LN E+YKQWKSN+NTILMIDDLR                          IKANDKAKV ILASIS+VLAKKH+++V  KEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPSSQA
Subjt:  MFGQPSSQA

A0A6J1DWL0 uncharacterized protein LOC1110247341.3e-2566.06Show/hide
Query:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS
        MS SIIALL+AQ LNGE+Y+QWKSNLNTIL+IDDLR                          IK+NDKAKVYILASIS+VLAKKH+DTVT KEIMDSLQS
Subjt:  MSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRL-------------------------IKANDKAKVYILASISNVLAKKHKDTVTAKEIMDSLQS

Query:  MFGQPSSQA
        MFGQPS QA
Subjt:  MFGQPSSQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGCGCCATGGCGCTGCGGGGACAGCACACAGCGCCACGGCGCTGCCCTTAGGCGCCGAGGCGCTGTTCCGGGTGTTTTTCGACGCATTTCCGTGTGTGAGTTC
CATGCTCGGCCTCGTGTCGCCCTGGGCTCGGCCTCCGTACGGAAGGTGTTTGCATGGTTCAATATCGAGCATGTCTACTTCCATTATTGCACTCCTATCCGCTCAAACAC
TTAACGGCGAGAGTTACAAACAATGGAAATCGAATCTAAACACTATTCTCATGATAGATGATCTTAGGTTGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCG
AGCATATCTAATGTGCTTGCCAAGAAGCACAAGGACACAGTCACCGCTAAGGAGATCATGGACTCGTTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAGCGCCATGGCGCTGCGGGGACAGCACACAGCGCCACGGCGCTGCCCTTAGGCGCCGAGGCGCTGTTCCGGGTGTTTTTCGACGCATTTCCGTGTGTGAGTTC
CATGCTCGGCCTCGTGTCGCCCTGGGCTCGGCCTCCGTACGGAAGGTGTTTGCATGGTTCAATATCGAGCATGTCTACTTCCATTATTGCACTCCTATCCGCTCAAACAC
TTAACGGCGAGAGTTACAAACAATGGAAATCGAATCTAAACACTATTCTCATGATAGATGATCTTAGGTTGATCAAGGCCAATGACAAGGCCAAGGTCTACATCTTGGCG
AGCATATCTAATGTGCTTGCCAAGAAGCACAAGGACACAGTCACCGCTAAGGAGATCATGGACTCGTTGCAGAGCATGTTTGGACAACCGTCCTCACAGGCTTGA
Protein sequenceShow/hide protein sequence
MQQRHGAAGTAHSATALPLGAEALFRVFFDAFPCVSSMLGLVSPWARPPYGRCLHGSISSMSTSIIALLSAQTLNGESYKQWKSNLNTILMIDDLRLIKANDKAKVYILA
SISNVLAKKHKDTVTAKEIMDSLQSMFGQPSSQA