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Moc06g12150 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12150
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:9300228..9300598
RNA-Seq ExpressionMoc06g12150
SyntenyMoc06g12150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036436.1 uncharacterized protein E6C27_scaffold147G00010 [Cucumis melo var. makuwa]1.1e-1453.95Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRAYMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL
        ++M+ D+S+DFRA ++VV  ++ ++NT++NL M+A  + +E  CTI+TWD LKK L +QFF EN+EILARRKLR+L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRAYMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL

KAA0052266.1 uncharacterized protein E6C27_scaffold207G00900 [Cucumis melo var. makuwa]1.8e-1237.5Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL
        ++M+  +S+DFR  ++VV  E+ ++N ++NL MRA                                            Y+DIQEGRCT++TWD LK+ L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL

Query:  RAQFFSENIEILARRKLREL
        R+QFF EN+EILARRKLR+L
Subjt:  RAQFFSENIEILARRKLREL

TYK14924.1 uncharacterized protein E5676_scaffold1623G00170 [Cucumis melo var. makuwa]3.7e-1341.96Show/hide
Query:  MVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------YMDIQEGRCTINTWDELKKALRAQFFSEN
        M+ D+S+DF+A ++VV  E+ ++NT++NL MRA                                      YMDIQEG CTI+TWD LKK L +QFF+EN
Subjt:  MVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------YMDIQEGRCTINTWDELKKALRAQFFSEN

Query:  IEILARRKLREL
        +EIL RRKLR+L
Subjt:  IEILARRKLREL

TYK23130.1 uncharacterized protein E5676_scaffold142G001280 [Cucumis melo var. makuwa]5.7e-1447.25Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA---------------YMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL
        ++M+  +S+DFR  ++V+  E+ + N ++NL +RA               Y+D+QEGRCTI+TWD LKK LR+QFF EN+EILARR+L EL
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA---------------YMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL

TYK28632.1 uncharacterized protein E5676_scaffold2030G00580 [Cucumis melo var. makuwa]3.1e-1238.33Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL
        ++M+  +  D RA ++VV+ E+V+++ ++NL MRA                                            Y+D+QEGRCTI+TWD LKK L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL

Query:  RAQFFSENIEILARRKLREL
        R+QFFSEN+EILA+RKLREL
Subjt:  RAQFFSENIEILARRKLREL

TrEMBL top hitse value%identityAlignment
A0A5A7T2X9 Retrotrans_gag domain-containing protein5.5e-1553.95Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRAYMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL
        ++M+ D+S+DFRA ++VV  ++ ++NT++NL M+A  + +E  CTI+TWD LKK L +QFF EN+EILARRKLR+L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRAYMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL

A0A5A7UDJ0 Retrotrans_gag domain-containing protein8.9e-1337.5Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL
        ++M+  +S+DFR  ++VV  E+ ++N ++NL MRA                                            Y+DIQEGRCT++TWD LK+ L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL

Query:  RAQFFSENIEILARRKLREL
        R+QFF EN+EILARRKLR+L
Subjt:  RAQFFSENIEILARRKLREL

A0A5D3CVG3 Retrotrans_gag domain-containing protein1.8e-1341.96Show/hide
Query:  MVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------YMDIQEGRCTINTWDELKKALRAQFFSEN
        M+ D+S+DF+A ++VV  E+ ++NT++NL MRA                                      YMDIQEG CTI+TWD LKK L +QFF+EN
Subjt:  MVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------YMDIQEGRCTINTWDELKKALRAQFFSEN

Query:  IEILARRKLREL
        +EIL RRKLR+L
Subjt:  IEILARRKLREL

A0A5D3DIB9 Retrotrans_gag domain-containing protein2.8e-1447.25Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA---------------YMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL
        ++M+  +S+DFR  ++V+  E+ + N ++NL +RA               Y+D+QEGRCTI+TWD LKK LR+QFF EN+EILARR+L EL
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA---------------YMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL

A0A5D3DYI1 Retrotrans_gag domain-containing protein1.5e-1238.33Show/hide
Query:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL
        ++M+  +  D RA ++VV+ E+V+++ ++NL MRA                                            Y+D+QEGRCTI+TWD LKK L
Subjt:  MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRA--------------------------------------------YMDIQEGRCTINTWDELKKAL

Query:  RAQFFSENIEILARRKLREL
        R+QFFSEN+EILA+RKLREL
Subjt:  RAQFFSENIEILARRKLREL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGGTCAGGGACCTTTCCGACGACTTTCGAGCTGCTATAGAAGTCGTGCTGGTAGAAGTCGTCGAGATAAACACGAAGGTGAACCTCGCCATGAGAGCG
TATATGGACATCCAAGAGGGTCGGTGTACTATAAACACATGGGACGAGTTGAAGAAAGCTTTAAGGGCGCAGTTCTTTTCGGAGAATATTGAAATTCTAGCGAGA
CGTAAACTACGAGAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGGTCAGGGACCTTTCCGACGACTTTCGAGCTGCTATAGAAGTCGTGCTGGTAGAAGTCGTCGAGATAAACACGAAGGTGAACCTCGCCATGAGAGCG
TATATGGACATCCAAGAGGGTCGGTGTACTATAAACACATGGGACGAGTTGAAGAAAGCTTTAAGGGCGCAGTTCTTTTCGGAGAATATTGAAATTCTAGCGAGA
CGTAAACTACGAGAGTTGTGA
Protein sequenceShow/hide protein sequence
MQMVRDLSDDFRAAIEVVLVEVVEINTKVNLAMRAYMDIQEGRCTINTWDELKKALRAQFFSENIEILARRKLREL