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Moc06g12330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionpolygalacturonase ADPG2-like
Genome locationchr6:9426079..9429496
RNA-Seq ExpressionMoc06g12330
SyntenyMoc06g12330
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153883.1 polygalacturonase ADPG2-like [Momordica charantia]1.8e-2389.39Show/hide
Query:  CCDELTQTTNRASTEQENEDHNSHQLSVEEVFSTPANNHKAGIEEGSSIPINAAKTKNGHASTIEE
        CCDELTQTTNRASTEQ+NEDHNSHQLSV+++FSTP N HKAGIEEGSSIPINAAKTKNGHA TIEE
Subjt:  CCDELTQTTNRASTEQENEDHNSHQLSVEEVFSTPANNHKAGIEEGSSIPINAAKTKNGHASTIEE
TrEMBL top hitse value%identityAlignment
A0A6J1DIR2 polygalacturonase ADPG2-like8.7e-2489.39Show/hide
Query:  CCDELTQTTNRASTEQENEDHNSHQLSVEEVFSTPANNHKAGIEEGSSIPINAAKTKNGHASTIEE
        CCDELTQTTNRASTEQ+NEDHNSHQLSV+++FSTP N HKAGIEEGSSIPINAAKTKNGHA TIEE
Subjt:  CCDELTQTTNRASTEQENEDHNSHQLSVEEVFSTPANNHKAGIEEGSSIPINAAKTKNGHASTIEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCTAGAAGCCAAGTGGTTAAAAGGCCATCATTGGTCCATGTGCTATCTTGTGAGAAACTTGTTGCTGTATCTGCATCCTTCCCTTCCATTGCTGTAGGTTTATT
CTCACTAAGTGTAGGAGATCGGACCACAAGTGCATATGTGCCTCAATTGACACCAACAAAACCAATGTCAGAAAAACAAGCAGCAAGCTGTTGCGATGAACTTACACAGA
CAACAAATAGAGCTTCCACGGAGCAAGAAAATGAGGATCACAATTCTCACCAACTTAGTGTTGAAGAAGTTTTTTCAACTCCTGCCAACAATCATAAAGCTGGTATTGAG
GAAGGATCCTCAATTCCTATCAATGCTGCTAAAACAAAAAATGGTCATGCATCTACCATTGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCTAGAAGCCAAGTGGTTAAAAGGCCATCATTGGTCCATGTGCTATCTTGTGAGAAACTTGTTGCTGTATCTGCATCCTTCCCTTCCATTGCTGTAGGTTTATT
CTCACTAAGTGTAGGAGATCGGACCACAAGTGCATATGTGCCTCAATTGACACCAACAAAACCAATGTCAGAAAAACAAGCAGCAAGCTGTTGCGATGAACTTACACAGA
CAACAAATAGAGCTTCCACGGAGCAAGAAAATGAGGATCACAATTCTCACCAACTTAGTGTTGAAGAAGTTTTTTCAACTCCTGCCAACAATCATAAAGCTGGTATTGAG
GAAGGATCCTCAATTCCTATCAATGCTGCTAAAACAAAAAATGGTCATGCATCTACCATTGAGGAATGA
Protein sequenceShow/hide protein sequence
MVPRSQVVKRPSLVHVLSCEKLVAVSASFPSIAVGLFSLSVGDRTTSAYVPQLTPTKPMSEKQAASCCDELTQTTNRASTEQENEDHNSHQLSVEEVFSTPANNHKAGIE
EGSSIPINAAKTKNGHASTIEE