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Moc06g12370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMuDRA-like transposase
Genome locationchr6:9452122..9453471
RNA-Seq ExpressionMoc06g12370
SyntenyMoc06g12370
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150312.1 uncharacterized protein LOC111018510 [Momordica charantia]9.1e-3276.09Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYPP
        E +M TAEN+A+TH +  I+HHE +VSD LK VRVNLNT TC CKQFDYFQFPCSHAIA ATLRNVN YTLCSP YSLQTLIT YAE +YPP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYPP

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]1.1e-3231.04Show/hide
Query:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------
        RPKDI+++MRK YGVNIRYEKAWRAKEVALN+L+GS KE Y  LR+Y EALK VN                                             
Subjt:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------

Query:  ---------------------------------------------------------------------------------------DKFKNDAIQENFI
                                                                                               DKFKND IQ  FI
Subjt:  ---------------------------------------------------------------------------------------DKFKNDAIQENFI

Query:  LGAKAFRKSEFR----------------------------------------------------------------------------------------
        L AKAF+KS FR                                                                                        
Subjt:  LGAKAFRKSEFR----------------------------------------------------------------------------------------

Query:  -----MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
             M  AENL+R +SIT ID HELEV D LKR RVNLN RTC CK+FD+++ PCSHAIA  T +NVN Y+LCSPAYSLQTLI  YAE +YP
Subjt:  -----MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]1.8e-3279.12Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
        E +M TAENL+RTHSIT IDHHELEVS+ LKRVRVNLN RTC CK+FDYFQ PCSHAIA AT RNVN YTLCSPAY+LQTLI  Y EP YP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]2.4e-3276.92Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
        E +M T ENL+RTHSIT IDHH+LEVSD LKRVRVNLN RTC CK+FDYFQFPCSHAIA  T  NVN YTLCSPAY++QTLI TY EP+YP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

XP_022158892.1 uncharacterized protein LOC111025350 [Momordica charantia]5.9e-3938.87Show/hide
Query:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------
        RPKDII+N++K Y VN+RY++AW AK+VALNLL+GS KE YTLLRKYG ALKAVN                                             
Subjt:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------

Query:  ------------------------------------------------------DKFKNDAIQENFILGAKAFRKSEFR---------------------
                                                              +KFKND IQE FIL AK FRKSEFR                     
Subjt:  ------------------------------------------------------DKFKNDAIQENFILGAKAFRKSEFR---------------------

Query:  -----------------------------MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSP
                                     M +A+NL  THSIT IDHHELEV D LK VRVNLN RTC CK+FDYFQ PCSHAIA AT RNVN YTLCSP
Subjt:  -----------------------------MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSP

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A6J1DAE4 uncharacterized protein LOC1110185104.4e-3276.09Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYPP
        E +M TAEN+A+TH +  I+HHE +VSD LK VRVNLNT TC CKQFDYFQFPCSHAIA ATLRNVN YTLCSP YSLQTLIT YAE +YPP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYPP

A0A6J1DL12 uncharacterized protein LOC1110220775.2e-3331.04Show/hide
Query:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------
        RPKDI+++MRK YGVNIRYEKAWRAKEVALN+L+GS KE Y  LR+Y EALK VN                                             
Subjt:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------

Query:  ---------------------------------------------------------------------------------------DKFKNDAIQENFI
                                                                                               DKFKND IQ  FI
Subjt:  ---------------------------------------------------------------------------------------DKFKNDAIQENFI

Query:  LGAKAFRKSEFR----------------------------------------------------------------------------------------
        L AKAF+KS FR                                                                                        
Subjt:  LGAKAFRKSEFR----------------------------------------------------------------------------------------

Query:  -----MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
             M  AENL+R +SIT ID HELEV D LKR RVNLN RTC CK+FD+++ PCSHAIA  T +NVN Y+LCSPAYSLQTLI  YAE +YP
Subjt:  -----MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

A0A6J1DP73 uncharacterized protein LOC1110225368.9e-3379.12Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
        E +M TAENL+RTHSIT IDHHELEVS+ LKRVRVNLN RTC CK+FDYFQ PCSHAIA AT RNVN YTLCSPAY+LQTLI  Y EP YP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

A0A6J1DRF6 uncharacterized protein LOC1110236641.2e-3276.92Show/hide
Query:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
        E +M T ENL+RTHSIT IDHH+LEVSD LKRVRVNLN RTC CK+FDYFQFPCSHAIA  T  NVN YTLCSPAY++QTLI TY EP+YP
Subjt:  EFRMHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP

A0A6J1DYC8 uncharacterized protein LOC1110253502.8e-3938.87Show/hide
Query:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------
        RPKDII+N++K Y VN+RY++AW AK+VALNLL+GS KE YTLLRKYG ALKAVN                                             
Subjt:  RPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVN---------------------------------------------

Query:  ------------------------------------------------------DKFKNDAIQENFILGAKAFRKSEFR---------------------
                                                              +KFKND IQE FIL AK FRKSEFR                     
Subjt:  ------------------------------------------------------DKFKNDAIQENFILGAKAFRKSEFR---------------------

Query:  -----------------------------MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSP
                                     M +A+NL  THSIT IDHHELEV D LK VRVNLN RTC CK+FDYFQ PCSHAIA AT RNVN YTLCSP
Subjt:  -----------------------------MHTAENLARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSP

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase4.5e-0529.49Show/hide
Query:  ITSIDHHELEVSDRLKRVR--VNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP
        IT ++    +VS+  ++    V LN  TC C++F  ++FPC HA+A      +N        Y+++    TYA    P
Subjt:  ITSIDHHELEVSDRLKRVR--VNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGATCATCTGTGGTGGTGACTCATTCATCATTTCGAAGTTTACCGTTGTCCACAACTGCAGACGTGAGGCCGAAGGACATTATTAGCAACATGCGAAAGACTTA
TGGGGTTAACATTAGATATGAAAAGGCATGGCGGGCAAAAGAAGTGGCATTGAATCTACTTATGGGATCACGAAAAGAGTACTATACTCTACTACGCAAGTATGGAGAAG
CCTTGAAGGCTGTCAATGACAAGTTCAAGAATGATGCTATTCAAGAAAATTTCATCCTAGGAGCAAAGGCATTCCGGAAGTCAGAGTTTAGGATGCATACTGCAGAGAAC
CTGGCTCGAACACACTCCATCACATCCATTGACCATCACGAGTTGGAGGTGAGCGATAGACTGAAAAGGGTGCGTGTGAATTTAAATACAAGGACCTGTAGATGTAAACA
GTTTGACTACTTCCAGTTCCCTTGCTCCCATGCTATTGCAACGGCAACCCTTCGGAACGTGAACATGTATACACTATGCTCACCTGCATATAGTCTACAAACTCTGATTA
CCACATATGCCGAACCTATGTACCCCCCGGCGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGATCATCTGTGGTGGTGACTCATTCATCATTTCGAAGTTTACCGTTGTCCACAACTGCAGACGTGAGGCCGAAGGACATTATTAGCAACATGCGAAAGACTTA
TGGGGTTAACATTAGATATGAAAAGGCATGGCGGGCAAAAGAAGTGGCATTGAATCTACTTATGGGATCACGAAAAGAGTACTATACTCTACTACGCAAGTATGGAGAAG
CCTTGAAGGCTGTCAATGACAAGTTCAAGAATGATGCTATTCAAGAAAATTTCATCCTAGGAGCAAAGGCATTCCGGAAGTCAGAGTTTAGGATGCATACTGCAGAGAAC
CTGGCTCGAACACACTCCATCACATCCATTGACCATCACGAGTTGGAGGTGAGCGATAGACTGAAAAGGGTGCGTGTGAATTTAAATACAAGGACCTGTAGATGTAAACA
GTTTGACTACTTCCAGTTCCCTTGCTCCCATGCTATTGCAACGGCAACCCTTCGGAACGTGAACATGTATACACTATGCTCACCTGCATATAGTCTACAAACTCTGATTA
CCACATATGCCGAACCTATGTACCCCCCGGCGATGTAG
Protein sequenceShow/hide protein sequence
MQRSSVVVTHSSFRSLPLSTTADVRPKDIISNMRKTYGVNIRYEKAWRAKEVALNLLMGSRKEYYTLLRKYGEALKAVNDKFKNDAIQENFILGAKAFRKSEFRMHTAEN
LARTHSITSIDHHELEVSDRLKRVRVNLNTRTCRCKQFDYFQFPCSHAIATATLRNVNMYTLCSPAYSLQTLITTYAEPMYPPAM