; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g12670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationchr6:9783604..9785163
RNA-Seq ExpressionMoc06g12670
SyntenyMoc06g12670
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588219.1 Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-12373.55Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR------GSNGGGGIQFHGNNIDGFGFPSGGS
        MWPSSSS+   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT LAPS++G+EE NLMISR      G  GGGG+QFHGNN DGFGF  GGS
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR------GSNGGGGIQFHGNNIDGFGFPSGGS

Query:  CWGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT-----ATATAGTSSGSTSGDKKP
                            S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+     A AT GTSSGSTSG KKP
Subjt:  CWGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT-----ATATAGTSSGSTSGDKKP

Query:  RLIASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSD
        RLIASQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SD
Subjt:  RLIASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSD

Query:  LHLGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LHLGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPIN
Subjt:  LHLGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

XP_022933450.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita moschata]2.5e-12273.82Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG
        MWPS+SS+   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT LAPS++G+EE NLMISRG +   GGGG+QFHGNN DGFGF  GGS   
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG

Query:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA
                         S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRLIA
Subjt:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA

Query:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG
        SQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLHLG
Subjt:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG

Query:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        GGGDGGSTSSP +DP+DVY SS   GGGLAG S YGNPIN
Subjt:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

XP_022974160.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita maxima]2.2e-12373.98Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC
        MWPSSSSS   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT +APS++G+EE NLMISR     G  GGGG+QFHGNN DGFGF  GGS 
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC

Query:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL
                           S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRL
Subjt:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL

Query:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH
        IASQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLH
Subjt:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH

Query:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPIN
Subjt:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

XP_022974168.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucurbita maxima]6.1e-12173.39Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC
        MWPSSSSS   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT +APS++G+EE NLMISR     G  GGGG+QFHGNN DGFGF  GGS 
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC

Query:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL
                           S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRL
Subjt:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL

Query:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH
        IASQTTTNSHTSTSNTP+RSFD  S  DMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLH
Subjt:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH

Query:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPIN
Subjt:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

XP_023531847.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita pepo subsp. pepo]5.0e-12373.98Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC
        MWPSSSSS   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT LAPS++G+EE NLMISR     G  GGGG+QFHGNN DGFGF  GGS 
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC

Query:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL
                           S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRL
Subjt:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL

Query:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH
        IASQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLH
Subjt:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH

Query:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPI+
Subjt:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

TrEMBL top hitse value%identityAlignment
A0A5A7UJ85 Protein LATERAL ROOT PRIMORDIUM 14.8e-11672.65Show/hide
Query:  MWPSSSSSSSPRPITSGYAN--AAAPDMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR---GSNGGGGIQFHGNNIDGFGFPSGGSCWG
        MWPSS      RP+T GY +  A  PDM+GLMASG GV    GV VLPLLT LAPS++G+EEANLMISR   G  GGGGIQF+GNN+DGFG   GGS   
Subjt:  MWPSSSSSSSPRPITSGYAN--AAAPDMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR---GSNGGGGIQFHGNNIDGFGFPSGGSCWG

Query:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTA---TATAGTSSGSTSGDKKPRLIAS
                         S N G+GTCHDCGNQAKKDCSHRRCRSCCKSRGFDC+THVKSTWVPAARRRERQM+ A    A  GTSSGSTSG KKPRLIAS
Subjt:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTA---TATAGTSSGSTSGDKKPRLIAS

Query:  QTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGG-GGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG
        QTTTNSHTSTSNTP+ SFD SSAADMS KKA KLP+Q+RAPAVFKCVRVTAVEGG  GGGNEYAYQAVV+IGGHVFKGYLYDHGVEARDGFP  S+LHL 
Subjt:  QTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGG-GGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG

Query:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
          GDGGSTSSP +DP+DVY SS   GGGLAGGS YGN IN
Subjt:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

A0A6J1EZ30 protein LATERAL ROOT PRIMORDIUM 1-like isoform X23.2e-12073.24Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG
        MWPS+SS+   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT LAPS++G+EE NLMISRG +   GGGG+QFHGNN DGFGF  GGS   
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG

Query:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA
                         S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRLIA
Subjt:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA

Query:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG
        SQTTTNSHTSTSNTP+RSFD  S  DMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLHLG
Subjt:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG

Query:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        GGGDGGSTSSP +DP+DVY SS   GGGLAG S YGNPIN
Subjt:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

A0A6J1F4X3 protein LATERAL ROOT PRIMORDIUM 1-like isoform X11.2e-12273.82Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG
        MWPS+SS+   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT LAPS++G+EE NLMISRG +   GGGG+QFHGNN DGFGF  GGS   
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSN---GGGGIQFHGNNIDGFGFPSGGSCWG

Query:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA
                         S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRLIA
Subjt:  CEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRLIA

Query:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG
        SQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLHLG
Subjt:  SQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLG

Query:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        GGGDGGSTSSP +DP+DVY SS   GGGLAG S YGNPIN
Subjt:  GGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

A0A6J1ID91 protein LATERAL ROOT PRIMORDIUM 1-like isoform X11.1e-12373.98Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC
        MWPSSSSS   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT +APS++G+EE NLMISR     G  GGGG+QFHGNN DGFGF  GGS 
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC

Query:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL
                           S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRL
Subjt:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL

Query:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH
        IASQTTTNSHTSTSNTP+RSFD  SAADMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLH
Subjt:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH

Query:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPIN
Subjt:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

A0A6J1IFF1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X22.9e-12173.39Show/hide
Query:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC
        MWPSSSSS   RPI   Y + A P  DM+GLMASG GV    G+ VLPLLT +APS++G+EE NLMISR     G  GGGG+QFHGNN DGFGF  GGS 
Subjt:  MWPSSSSSSSPRPITSGYANAAAP--DMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISR-----GSNGGGGIQFHGNNIDGFGFPSGGSC

Query:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL
                           S N G+GTCHDCGNQAKKDC+HRRCRSCCKSRGFDCATHVKSTWVPAARRRERQ+L+    A AT GTSSGSTSG KKPRL
Subjt:  WGCEQCPTDRTENISIGMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT----ATATAGTSSGSTSGDKKPRL

Query:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH
        IASQTTTNSHTSTSNTP+RSFD  S  DMS K+A KLP+QVRAPAVFKCVRVTAVEGGG GGNEYAYQAVV+IGGHVFKGYLYDHGVEAR+GFPM SDLH
Subjt:  IASQTTTNSHTSTSNTPSRSFDNSSAADMSCKKA-KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLH

Query:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN
        LGGGGDGGSTSSP +DP+DVY SS   GGGLAGGS YGNPIN
Subjt:  LGGGGDGGSTSSPAVDPTDVYVSSG--GGGLAGGSSYGNPIN

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 11.3e-2840.27Show/hide
Query:  MRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRER-QMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS
        MRS   G+ +C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER Q L A         + + + K +      + +S  ST     R 
Subjt:  MRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRER-QMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS

Query:  FDNSSAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTS----SPAVDP
          N++  ++     K P +VR  AVF+C++++++E      ++ AYQA V IGGHVFKG LYD G E++    + +      GG  G       + A   
Subjt:  FDNSSAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTS----SPAVDP

Query:  TDVYVSSGGGGLAGGSSYGNP
        T    S G    AG S++ +P
Subjt:  TDVYVSSGGGGLAGGSSYGNP

O65517 Protein SHI RELATED SEQUENCE 24.5e-3445.45Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTS------GDKKPRLIASQTTTNSHTSTSNTPSRSFDNS
        +C DCGNQAKKDC+H RCR+CCKSRGFDC+THV+STW+P ARRRERQ     +T+G   GS S      G   P+     T   + +S+S  PS S    
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTS------GDKKPRLIASQTTTNSHTSTSNTPSRSFDNS

Query:  SAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEA--RDGFPMFSD--LHLGGGGDGGSTSSPAVDPTDVY
          A +   +A  P +V + A+F+CV+++ V+ GG G  +YAYQ  V IGGH+FKG LYD G E+    G    SD      GGG GG   +P V      
Subjt:  SAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEA--RDGFPMFSD--LHLGGGGDGGSTSSPAVDPTDVY

Query:  VSSGGGGLA
        V+ GGGG++
Subjt:  VSSGGGGLA

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 15.6e-6149.68Show/hide
Query:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH
        M S       +GVGV+PLLT+  P    +E+++            I F GNN     + +  +    +      T   ++G  S+N G G       TC 
Subjt:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-
        DCGNQAKK+C  RRCR+CCKSRGFDC+THVKSTWV AARRRERQ++   A  TAG+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+ SS+ 
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-

Query:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS
         D    +   P QVRA AVFKCVRVTAVE    G +EYAYQAVV+IGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+P +DP +V V  
Subjt:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS

Query:  GGGGLAGG
        GGGG  GG
Subjt:  GGGGLAGG

Q9LQZ5 Protein SHI RELATED SEQUENCE 59.6e-2944Show/hide
Query:  GMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS
        G   +  G   C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER    A+    ++S   + + K    AS    N     S     +
Subjt:  GMRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS

Query:  FDNSSAADMSCKKA-----KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARD
          N+   + +          LP +V +PA+F+CVRV+++E        YAYQ  V IGGH+FKG LYD G E +D
Subjt:  FDNSSAADMSCKKA-----KLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARD

Q9XGX0 Protein SHORT INTERNODES1.8e-3043.69Show/hide
Query:  MRS-SNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS
        MRS S  G  +C DCGNQ+KKDCSH RCR+CCKSRG DC THVKSTWVPAA+RRERQ   +T       G +   ++   I +++T+ ++T     PS  
Subjt:  MRS-SNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRS

Query:  FDNSSAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPAVDPTDV
         +N+S  ++       P +V + AVF+CVRV++V+       EYAY+  V IGGHVFKG LYD G   R      S  L+L   G   S+SSP V   + 
Subjt:  FDNSSAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSD-LHLGGGGDGGSTSSPAVDPTDV

Query:  YVSSGGGGLAGGSS--YGNPIN
         V S        +S  Y  PIN
Subjt:  YVSSGGGGLAGGSS--YGNPIN

Arabidopsis top hitse value%identityAlignment
AT4G36260.1 Lateral root primordium (LRP) protein-related3.2e-3545.45Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTS------GDKKPRLIASQTTTNSHTSTSNTPSRSFDNS
        +C DCGNQAKKDC+H RCR+CCKSRGFDC+THV+STW+P ARRRERQ     +T+G   GS S      G   P+     T   + +S+S  PS S    
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTS------GDKKPRLIASQTTTNSHTSTSNTPSRSFDNS

Query:  SAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEA--RDGFPMFSD--LHLGGGGDGGSTSSPAVDPTDVY
          A +   +A  P +V + A+F+CV+++ V+ GG G  +YAYQ  V IGGH+FKG LYD G E+    G    SD      GGG GG   +P V      
Subjt:  SAADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEA--RDGFPMFSD--LHLGGGGDGGSTSSPAVDPTDVY

Query:  VSSGGGGLA
        V+ GGGG++
Subjt:  VSSGGGGLA

AT5G12330.1 Lateral root primordium (LRP) protein-related4.0e-6249.68Show/hide
Query:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH
        M S       +GVGV+PLLT+  P    +E+++            I F GNN     + +  +    +      T   ++G  S+N G G       TC 
Subjt:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-
        DCGNQAKK+C  RRCR+CCKSRGFDC+THVKSTWV AARRRERQ++   A  TAG+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+ SS+ 
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-

Query:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS
         D    +   P QVRA AVFKCVRVTAVE    G +EYAYQAVV+IGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+P +DP +V V  
Subjt:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS

Query:  GGGGLAGG
        GGGG  GG
Subjt:  GGGGLAGG

AT5G12330.2 Lateral root primordium (LRP) protein-related4.0e-6249.68Show/hide
Query:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH
        M S       +GVGV+PLLT+  P    +E+++            I F GNN     + +  +    +      T   ++G  S+N G G       TC 
Subjt:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-
        DCGNQAKK+C  RRCR+CCKSRGFDC+THVKSTWV AARRRERQ++   A  TAG+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+ SS+ 
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-

Query:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS
         D    +   P QVRA AVFKCVRVTAVE    G +EYAYQAVV+IGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+P +DP +V V  
Subjt:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS

Query:  GGGGLAGG
        GGGG  GG
Subjt:  GGGGLAGG

AT5G12330.3 Lateral root primordium (LRP) protein-related9.6e-3244.72Show/hide
Query:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH
        M S       +GVGV+PLLT+  P    +E+++            I F GNN     + +  +    +      T   ++G  S+N G G       TC 
Subjt:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA
        DCGNQAKK+C  RRCR+CCKSRGFDC+THVKSTWV AARRRERQ++   A  TAG+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+ SS+
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA

AT5G12330.4 Lateral root primordium (LRP) protein-related4.0e-6249.68Show/hide
Query:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH
        M S       +GVGV+PLLT+  P    +E+++            I F GNN     + +  +    +      T   ++G  S+N G G       TC 
Subjt:  MASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIGMRSSNFGMG-------TCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-
        DCGNQAKK+C  RRCR+CCKSRGFDC+THVKSTWV AARRRERQ++   A  TAG+S  ++SG KKPR++ S    Q    SHTSTSNTP +SF+ SS+ 
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLT--ATATAGTSSGSTSGDKKPRLIAS----QTTTNSHTSTSNTPSRSFDNSSA-

Query:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS
         D    +   P QVRA AVFKCVRVTAVE    G +EYAYQAVV+IGGHVFKG+LYD G+E ++GFP  SDLHLGG     +G S S+P +DP +V V  
Subjt:  ADMSCKKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGG---DGGSTSSPAVDPTDVYVSS

Query:  GGGGLAGG
        GGGG  GG
Subjt:  GGGGLAGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCCTCTTCCTCTTCCTCCTCCTCTCCCAGACCCATTACATCTGGCTATGCCAACGCAGCCGCGCCAGATATGATGGGTCTGATGGCCTCAGGCTTAGGTGTCGG
AGTTGGTATTGGTGTTGGTGTTTTACCTCTCCTCACGAGCCTTGCGCCGTCCAATATCGGAATGGAGGAAGCCAATCTCATGATCAGCCGCGGCAGCAACGGCGGAGGCG
GGATCCAGTTTCATGGGAACAATATTGATGGGTTTGGTTTTCCGTCTGGTGGGTCGTGTTGGGGATGTGAACAGTGTCCGACGGATCGAACCGAAAACATTTCTATTGGT
ATGAGATCTTCAAATTTTGGCATGGGAACGTGTCATGACTGCGGGAACCAAGCGAAGAAAGATTGTAGCCACCGCCGGTGCCGGAGCTGCTGCAAGAGCCGGGGATTCGA
CTGTGCCACTCATGTGAAGAGCACGTGGGTTCCCGCGGCACGGCGGAGAGAACGGCAGATGCTGACTGCCACCGCCACCGCCGGGACATCATCTGGATCCACCTCCGGCG
ACAAGAAGCCAAGGCTCATTGCTTCACAGACCACCACAAATTCACACACTTCCACTTCCAACACTCCATCACGAAGCTTCGACAATTCCTCAGCTGCAGATATGAGTTGT
AAGAAGGCAAAGCTGCCGGATCAAGTTCGAGCCCCGGCGGTCTTCAAGTGCGTTCGGGTGACTGCGGTGGAGGGCGGTGGTGGCGGCGGGAATGAATACGCGTATCAAGC
CGTCGTGAGGATCGGCGGGCATGTGTTTAAAGGATATCTATATGATCACGGTGTGGAAGCTAGAGATGGGTTTCCGATGTTTTCCGATTTGCATCTCGGAGGAGGCGGAG
ACGGTGGTTCGACGTCGTCACCGGCAGTTGATCCCACCGATGTTTATGTGAGTTCCGGTGGTGGCGGACTGGCCGGAGGTTCCAGCTATGGTAATCCAATAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCCCTCTTCCTCTTCCTCCTCCTCTCCCAGACCCATTACATCTGGCTATGCCAACGCAGCCGCGCCAGATATGATGGGTCTGATGGCCTCAGGCTTAGGTGTCGG
AGTTGGTATTGGTGTTGGTGTTTTACCTCTCCTCACGAGCCTTGCGCCGTCCAATATCGGAATGGAGGAAGCCAATCTCATGATCAGCCGCGGCAGCAACGGCGGAGGCG
GGATCCAGTTTCATGGGAACAATATTGATGGGTTTGGTTTTCCGTCTGGTGGGTCGTGTTGGGGATGTGAACAGTGTCCGACGGATCGAACCGAAAACATTTCTATTGGT
ATGAGATCTTCAAATTTTGGCATGGGAACGTGTCATGACTGCGGGAACCAAGCGAAGAAAGATTGTAGCCACCGCCGGTGCCGGAGCTGCTGCAAGAGCCGGGGATTCGA
CTGTGCCACTCATGTGAAGAGCACGTGGGTTCCCGCGGCACGGCGGAGAGAACGGCAGATGCTGACTGCCACCGCCACCGCCGGGACATCATCTGGATCCACCTCCGGCG
ACAAGAAGCCAAGGCTCATTGCTTCACAGACCACCACAAATTCACACACTTCCACTTCCAACACTCCATCACGAAGCTTCGACAATTCCTCAGCTGCAGATATGAGTTGT
AAGAAGGCAAAGCTGCCGGATCAAGTTCGAGCCCCGGCGGTCTTCAAGTGCGTTCGGGTGACTGCGGTGGAGGGCGGTGGTGGCGGCGGGAATGAATACGCGTATCAAGC
CGTCGTGAGGATCGGCGGGCATGTGTTTAAAGGATATCTATATGATCACGGTGTGGAAGCTAGAGATGGGTTTCCGATGTTTTCCGATTTGCATCTCGGAGGAGGCGGAG
ACGGTGGTTCGACGTCGTCACCGGCAGTTGATCCCACCGATGTTTATGTGAGTTCCGGTGGTGGCGGACTGGCCGGAGGTTCCAGCTATGGTAATCCAATAAATTGA
Protein sequenceShow/hide protein sequence
MWPSSSSSSSPRPITSGYANAAAPDMMGLMASGLGVGVGIGVGVLPLLTSLAPSNIGMEEANLMISRGSNGGGGIQFHGNNIDGFGFPSGGSCWGCEQCPTDRTENISIG
MRSSNFGMGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCATHVKSTWVPAARRRERQMLTATATAGTSSGSTSGDKKPRLIASQTTTNSHTSTSNTPSRSFDNSSAADMSC
KKAKLPDQVRAPAVFKCVRVTAVEGGGGGGNEYAYQAVVRIGGHVFKGYLYDHGVEARDGFPMFSDLHLGGGGDGGSTSSPAVDPTDVYVSSGGGGLAGGSSYGNPIN