; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g12760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr6:9862641..9866778
RNA-Seq ExpressionMoc06g12760
SyntenyMoc06g12760
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0043167 - ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152188.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia]3.6e-2465.12Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL
        ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++LF ANVAKE+ KKVED+LRQLF+EY L
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL

XP_022152189.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia]3.6e-2465.12Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL
        ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++LF ANVAKE+ KKVED+LRQLF+EY L
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL

XP_022152197.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica charantia]8.2e-2150.43Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR
        +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +LF+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S   
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR

Query:  MSQSIVASTSDSVVQPF
         S +   ST+D+    F
Subjt:  MSQSIVASTSDSVVQPF

XP_022152198.1 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica charantia]8.2e-2150.43Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR
        +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +LF+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S   
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR

Query:  MSQSIVASTSDSVVQPF
         S +   ST+D+    F
Subjt:  MSQSIVASTSDSVVQPF

XP_038890289.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]6.5e-2638.97Show/hide
Query:  RVSSAVNSNPI-LASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSM------------
        + SSA   N + L  + TK+Q K+DKYWG  ++ N  LYVAF+LDPRYKM F +YC  QLF+ +VAK +G KV  VLR LF EYNLS+            
Subjt:  RVSSAVNSNPI-LASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSM------------

Query:  -------------PK-------NVSSTSKGRMSQ----------------SIVAS-----TSDSVVQPFRFQV--TTVEALICVQNWLRPNAITIDLRSH
                     P+       ++    KG  S+                SIVAS     T   V+ PFR  +  TT+E+L+C QNWLR   I+I LR +
Subjt:  -------------PK-------NVSSTSKGRMSQ----------------SIVAS-----TSDSVVQPFRFQV--TTVEALICVQNWLRPNAITIDLRSH

Query:  LEEVCRVEENDCV
        LEE+   EE  C+
Subjt:  LEEVCRVEENDCV

TrEMBL top hitse value%identityAlignment
A0A6J1DE70 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X11.7e-2465.12Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL
        ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++LF ANVAKE+ KKVED+LRQLF+EY L
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL

A0A6J1DE80 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X24.0e-2150.43Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR
        +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +LF+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S   
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR

Query:  MSQSIVASTSDSVVQPF
         S +   ST+D+    F
Subjt:  MSQSIVASTSDSVVQPF

A0A6J1DFA9 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X21.7e-2465.12Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL
        ++  S+ + N +L  +A K+Q KYDKYWGN E ANYLLY+A VLDPRYKM FL+YCF++LF ANVAKE+ KKVED+LRQLF+EY L
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL

A0A6J1DFJ0 zinc finger BED domain-containing protein DAYSLEEPER-like isoform X14.0e-2150.43Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR
        +++    + N +L  +A K+Q KYDKYW N+E ANYL+YV+ VL P  KM FL YCF +LF+ANVA+E+ KKVED+LRQLF EY+LS+  N S T S   
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSST-SKGR

Query:  MSQSIVASTSDSVVQPF
         S +   ST+D+    F
Subjt:  MSQSIVASTSDSVVQPF

A0A6J1DGW5 zinc finger BED domain-containing protein RICESLEEPER 2-like4.0e-2160.47Show/hide
Query:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL
        ++  S+   N IL  +A K+Q KYDKYW N   ANY LY+A VLDPR KM FLMYCF++LF ANVAKE+ KKVED+L++LF+EY L
Subjt:  VRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNL

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 12.4e-0725.71Show/hide
Query:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVAST
        +P+ +S+A  M  ++DKYW   +  N +L +A V+DPR+KM  + + +++++    AK + K V+D + +L+ EY    +P   +   +G  + +  +  
Subjt:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVAST

Query:  SDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEE
        S     P     +T + L+    +L   A +   +S LE+
Subjt:  SDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEE

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 41.9e-0425.97Show/hide
Query:  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEY
        + + ++  +   +  K+DKYW   +  N +L +A  +DPR+KM  + + +++++    A +  K V+D +  L+ EY
Subjt:  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEY

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 27.0e-0724.65Show/hide
Query:  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVA
        + +P+ +S+A  M  ++DKYW   +  N +L +A V+DPR+KM  + + +++++    AK + K V+D + +L+ EY    +P   +   +G  + +  +
Subjt:  NSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLS-MPKNVSSTSKGRMSQSIVA

Query:  STSDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEE
                P     +T + L+    +L   A +   +S LE+
Subjt:  STSDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEE

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 37.0e-0732.1Show/hide
Query:  SSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEY
        ++  + +PI  S A  M  ++DKYW   +  N +L +A V+DPR+KM  + + ++++     AK + K V+D + +L++EY
Subjt:  SSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEY

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER9.8e-0937.08Show/hide
Query:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKG
        +P +  +A  MQ K DKYW      + +L +A V+DPR+KM  + + F+++F  +  K I K V+D + +LFTEY +++P   ++TS+G
Subjt:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKG

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain7.0e-1037.08Show/hide
Query:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKG
        +P +  +A  MQ K DKYW      + +L +A V+DPR+KM  + + F+++F  +  K I K V+D + +LFTEY +++P   ++TS+G
Subjt:  NPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCCGCCCTGTGCGTGTGTCGTCAGCGGTGAATAGTAATCCCATTCTTGCTAGCGTAGCGACCAAAATGCAGCTGAAATATGATAAGTATTGGGGGAAT
ACTGAAAAGGCAAATTATTTATTATATGTTGCATTTGTTCTCGACCCTCGTTATAAGATGAACTTTCTTATGTATTGTTTCACTCAACTATTCGAAGCTAATGTT
GCAAAGGAAATAGGAAAGAAAGTGGAAGATGTTTTGAGACAGCTATTTACTGAGTATAATTTGTCTATGCCTAAGAATGTTTCTTCTACTTCGAAGGGTCGGATG
AGTCAATCTATTGTTGCTTCTACTAGTGATAGTGTTGTACAGCCTTTCCGCTTTCAAGTCACTACAGTTGAGGCACTTATTTGTGTACAAAATTGGCTACGCCCA
AATGCTATTACTATTGACCTTCGATCGCATTTGGAAGAAGTTTGTCGTGTTGAAGAAAATGATTGTGTTCTTGGCTTGGATGTTCGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCCGCCCTGTGCGTGTGTCGTCAGCGGTGAATAGTAATCCCATTCTTGCTAGCGTAGCGACCAAAATGCAGCTGAAATATGATAAGTATTGGGGGAAT
ACTGAAAAGGCAAATTATTTATTATATGTTGCATTTGTTCTCGACCCTCGTTATAAGATGAACTTTCTTATGTATTGTTTCACTCAACTATTCGAAGCTAATGTT
GCAAAGGAAATAGGAAAGAAAGTGGAAGATGTTTTGAGACAGCTATTTACTGAGTATAATTTGTCTATGCCTAAGAATGTTTCTTCTACTTCGAAGGGTCGGATG
AGTCAATCTATTGTTGCTTCTACTAGTGATAGTGTTGTACAGCCTTTCCGCTTTCAAGTCACTACAGTTGAGGCACTTATTTGTGTACAAAATTGGCTACGCCCA
AATGCTATTACTATTGACCTTCGATCGCATTTGGAAGAAGTTTGTCGTGTTGAAGAAAATGATTGTGTTCTTGGCTTGGATGTTCGAGGATAA
Protein sequenceShow/hide protein sequence
MVGRPVRVSSAVNSNPILASVATKMQLKYDKYWGNTEKANYLLYVAFVLDPRYKMNFLMYCFTQLFEANVAKEIGKKVEDVLRQLFTEYNLSMPKNVSSTSKGRM
SQSIVASTSDSVVQPFRFQVTTVEALICVQNWLRPNAITIDLRSHLEEVCRVEENDCVLGLDVRG