; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g12860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g12860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDUF4219 domain-containing protein
Genome locationchr6:9931019..9934708
RNA-Seq ExpressionMoc06g12860
SyntenyMoc06g12860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD44881.1 TPA_asm: hypothetical protein HUJ06_003111 [Nelumbo nucifera]1.0e-1844.83Show/hide
Query:  SNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN--------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTK
        S + ++K    +Y YW+L MEA+L GQD WDL++ +D                           RTSI KEYIDHV  +D PK++WDTL+R FTQKNT +
Subjt:  SNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN--------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTK

Query:  LQYLENELARRIRGKV
        LQYLENELA   +G +
Subjt:  LQYLENELARRIRGKV

DAD45748.1 TPA_asm: hypothetical protein HUJ06_003978 [Nelumbo nucifera]6.5e-2150Show/hide
Query:  VSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIE------DN---------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNT
        VSN+CVDK   ++YSYWKL MEA+L GQD WDLI+ +      DN                     RT I KEYI+HVHD+  PKQ+W+TL+  FTQKNT
Subjt:  VSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIE------DN---------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNT

Query:  TKLQYLENELARRIRG
         +LQ+LENEL   I+G
Subjt:  TKLQYLENELARRIRG

KAA8540328.1 hypothetical protein F0562_024753 [Nyssa sinensis]8.0e-1949.12Show/hide
Query:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ
        MN  S+V +DK   ++YSYWKL MEA+L GQD WDLIS +D                            RTSI +EYI HV D   PKQVW+TL+R FTQ
Subjt:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ

Query:  KNTTKLQYLENELA
        KNT +LQ+LEN+LA
Subjt:  KNTTKLQYLENELA

XP_022930363.1 uncharacterized protein LOC111436832 isoform X1 [Cucurbita moschata]8.0e-1946.55Show/hide
Query:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL
        V ++K   ++YSYWKL MEA+L GQD WDLI  +D                            RT I KEYIDHV D+  PKQVWDTL++ FT+KNT +L
Subjt:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL

Query:  QYLENELARRIRGKVD
        Q+LENELA   +G +D
Subjt:  QYLENELARRIRGKVD

XP_022930366.1 uncharacterized protein LOC111436833 isoform X1 [Cucurbita moschata]8.0e-1946.55Show/hide
Query:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL
        V ++K   ++YSYWKL MEA+L GQD WDLI  +D                            RT I KEYIDHV D+  PKQVWDTL++ FT+KNT +L
Subjt:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL

Query:  QYLENELARRIRGKVD
        Q+LENELA   +G +D
Subjt:  QYLENELARRIRGKVD

TrEMBL top hitse value%identityAlignment
A0A443N8T5 Integrase, catalytic core8.6e-1948.74Show/hide
Query:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLIS------IEDN---------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ
        MN  SNV +DK   ++Y+YWKL MEA+L GQD WDLIS       ED                      RTSI ++YI  V DV  PKQVW+ L+R FTQ
Subjt:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLIS------IEDN---------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ

Query:  KNTTKLQYLENELARRIRG
        KNT +LQYLENELA   +G
Subjt:  KNTTKLQYLENELARRIRG

A0A5J5BCB3 Uncharacterized protein3.9e-1949.12Show/hide
Query:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ
        MN  S+V +DK   ++YSYWKL MEA+L GQD WDLIS +D                            RTSI +EYI HV D   PKQVW+TL+R FTQ
Subjt:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ

Query:  KNTTKLQYLENELA
        KNT +LQ+LEN+LA
Subjt:  KNTTKLQYLENELA

A0A5J5C7C2 DUF4219 domain-containing protein1.5e-1849.12Show/hide
Query:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ
        MN  S+V VDK   ++YSYWKL MEA+L GQD WDLIS +D                            RTSI +EYI HV D   PKQVW+TL+R FTQ
Subjt:  MNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIED---------------------------NRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQ

Query:  KNTTKLQYLENELA
        KN  +LQ+LEN+LA
Subjt:  KNTTKLQYLENELA

A0A6J1EQQ7 uncharacterized protein LOC111436833 isoform X13.9e-1946.55Show/hide
Query:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL
        V ++K   ++YSYWKL MEA+L GQD WDLI  +D                            RT I KEYIDHV D+  PKQVWDTL++ FT+KNT +L
Subjt:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL

Query:  QYLENELARRIRGKVD
        Q+LENELA   +G +D
Subjt:  QYLENELARRIRGKVD

A0A6J1F3D5 uncharacterized protein LOC111436832 isoform X13.9e-1946.55Show/hide
Query:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL
        V ++K   ++YSYWKL MEA+L GQD WDLI  +D                            RT I KEYIDHV D+  PKQVWDTL++ FT+KNT +L
Subjt:  VCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDN---------------------------RTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKL

Query:  QYLENELARRIRGKVD
        Q+LENELA   +G +D
Subjt:  QYLENELARRIRGKVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGAGGGGATGGTCAGTTGCCTACTTCCCTCCACTCCTCTCCGAAGCAATCTATAACAAAGACCTCTTTTGTTATTGTGGAGGCGATTTTTAAAGAGGGTCATTC
CTTTCCACTGGTTTCTGTGATGCTAAACGATGGCTGGGTGTTGGGATCTCCCCATTGGATGCCGATAGTGTTGTTGCGGCTCACAAAATCAAAGGTAACATTATTATGTA
TGGTATGTGGCTTCGTCATCTACCAAGCACAAAATTGGAGAGGGCACCCGCCTGTGATCTCTTGGAATGGCTCTTCATCTCCGTTGCATCCTAATTATTCAGAGAACTTT
TATGGTCCAGAGACAAAGATGACGGAGCAGAAGGTGGGCGATGGCGGAGGTGCGGTGGTGATAAGCTTGAACACCATTTTGGAATCTAGGGGTGTCATAATTGACAAGAT
TTCTCCACTAATTGAGGAGTCTCTCCCGATATCATTGAATGAGATTGAAGGTGTTGTGACTTTTGAGAAGGTGTTTAGTGGACTAAAAGCTGTTCATATTACTAGTTCTT
TGAATAGATTGTGCCATCTGATCCCCAGCCAGTCGATTAAGTGGATAGCGGCAATGCCCGGTGGGGTTTGTATTGGCAGAAATGAGATTTCTATTCTAGATCACATCACC
AGTTCTTCGGTCAAATGCTCTGCTAAAATGAACGATGTAAGCAATGTTTGTGTAGACAAGTTTACTAGTGATAGTTATAGCTATTGGAAGCTATATATGGAAGCTTTTCT
ACCAGGGCAAGATTTTTGGGATCTTATTTCTATTGAAGATAATCGAACTTCTATTGGAAAGGAGTATATCGACCATGTTCATGATGTAGATCCTCCAAAGCAAGTGTGGG
ATACACTTAAAAGGTTTTTCACTCAGAAGAACACGACGAAGTTGCAGTATTTAGAGAATGAACTTGCTAGAAGAATTCGAGGTAAAGTTGATCGAAGATTTTCATTCGAT
CTATTGAAAGGATTTGTATGGAGAAAAAGTGTTGGAGAAGATGTTTTCCAATATGAGGACTTGAGTTTGTCTACTATCCTCGAGAACTTAAGCTTGGGGAGCTTGCTTTG
GATTGACCTACTCGAAGATTTTGGAGTTGTTGTTGGTGATTTTTGCCTAACAAAGCTAATGTCACTCAAGTTTGGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGAGGGGATGGTCAGTTGCCTACTTCCCTCCACTCCTCTCCGAAGCAATCTATAACAAAGACCTCTTTTGTTATTGTGGAGGCGATTTTTAAAGAGGGTCATTC
CTTTCCACTGGTTTCTGTGATGCTAAACGATGGCTGGGTGTTGGGATCTCCCCATTGGATGCCGATAGTGTTGTTGCGGCTCACAAAATCAAAGGTAACATTATTATGTA
TGGTATGTGGCTTCGTCATCTACCAAGCACAAAATTGGAGAGGGCACCCGCCTGTGATCTCTTGGAATGGCTCTTCATCTCCGTTGCATCCTAATTATTCAGAGAACTTT
TATGGTCCAGAGACAAAGATGACGGAGCAGAAGGTGGGCGATGGCGGAGGTGCGGTGGTGATAAGCTTGAACACCATTTTGGAATCTAGGGGTGTCATAATTGACAAGAT
TTCTCCACTAATTGAGGAGTCTCTCCCGATATCATTGAATGAGATTGAAGGTGTTGTGACTTTTGAGAAGGTGTTTAGTGGACTAAAAGCTGTTCATATTACTAGTTCTT
TGAATAGATTGTGCCATCTGATCCCCAGCCAGTCGATTAAGTGGATAGCGGCAATGCCCGGTGGGGTTTGTATTGGCAGAAATGAGATTTCTATTCTAGATCACATCACC
AGTTCTTCGGTCAAATGCTCTGCTAAAATGAACGATGTAAGCAATGTTTGTGTAGACAAGTTTACTAGTGATAGTTATAGCTATTGGAAGCTATATATGGAAGCTTTTCT
ACCAGGGCAAGATTTTTGGGATCTTATTTCTATTGAAGATAATCGAACTTCTATTGGAAAGGAGTATATCGACCATGTTCATGATGTAGATCCTCCAAAGCAAGTGTGGG
ATACACTTAAAAGGTTTTTCACTCAGAAGAACACGACGAAGTTGCAGTATTTAGAGAATGAACTTGCTAGAAGAATTCGAGGTAAAGTTGATCGAAGATTTTCATTCGAT
CTATTGAAAGGATTTGTATGGAGAAAAAGTGTTGGAGAAGATGTTTTCCAATATGAGGACTTGAGTTTGTCTACTATCCTCGAGAACTTAAGCTTGGGGAGCTTGCTTTG
GATTGACCTACTCGAAGATTTTGGAGTTGTTGTTGGTGATTTTTGCCTAACAAAGCTAATGTCACTCAAGTTTGGACGATAG
Protein sequenceShow/hide protein sequence
MWGGDGQLPTSLHSSPKQSITKTSFVIVEAIFKEGHSFPLVSVMLNDGWVLGSPHWMPIVLLRLTKSKVTLLCMVCGFVIYQAQNWRGHPPVISWNGSSSPLHPNYSENF
YGPETKMTEQKVGDGGGAVVISLNTILESRGVIIDKISPLIEESLPISLNEIEGVVTFEKVFSGLKAVHITSSLNRLCHLIPSQSIKWIAAMPGGVCIGRNEISILDHIT
SSSVKCSAKMNDVSNVCVDKFTSDSYSYWKLYMEAFLPGQDFWDLISIEDNRTSIGKEYIDHVHDVDPPKQVWDTLKRFFTQKNTTKLQYLENELARRIRGKVDRRFSFD
LLKGFVWRKSVGEDVFQYEDLSLSTILENLSLGSLLWIDLLEDFGVVVGDFCLTKLMSLKFGR