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Moc06g14210 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g14210
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr6:11070628..11074314
RNA-Seq ExpressionMoc06g14210
SyntenyMoc06g14210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU44375.1 hypothetical protein TSUD_243070 [Trifolium subterraneum]9.0e-0841.98Show/hide
Query:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G +    +WSS++     N    E  L   L +L +GN+SLDE ++KFK +CDKL  + KP+ D+ KVF +++GL  KYKE
Subjt:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

KYP40069.1 hypothetical protein KK1_038610 [Cajanus cajan]7.6e-0743.59Show/hide
Query:  VWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKENISY
        +W++++N      + NE  L   L SL +G +SLDE ++KFK I DKL  L KPL D+ KVF +++GL  KYK   +Y
Subjt:  VWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKENISY

PNX56937.1 hypothetical protein L195_g050142, partial [Trifolium pratense]1.4e-0843.21Show/hide
Query:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G +    +WS++N     N   NE  L   L  L +G +SL+E ++KFK ICDKL  + KPL D+ KVF +++GL  KYKE
Subjt:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

RVW99459.1 putative mitochondrial protein [Vitis vinifera]5.8e-0740.24Show/hide
Query:  NGDENGTKVWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        +G E   +VW+S+  +     +  E+ L  +LL LK+G  SL+E +++FK ICD L  ++KP+ D+ KVF LA+GL  KY +
Subjt:  NGDENGTKVWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

XP_022154021.1 uncharacterized protein LOC111021379 [Momordica charantia]2.6e-1555.56Show/hide
Query:  GDENGTKVWSSVNN-----DRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G E   +VW S+        + NEIHLNE LL+LK+G++S+DE ++KFK +CD+L  +KKPLDD+TKVFHLARGL +KYK+
Subjt:  GDENGTKVWSSVNN-----DRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

TrEMBL top hitse value%identityAlignment
A0A151RC80 Uncharacterized protein3.7e-0743.59Show/hide
Query:  VWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKENISY
        +W++++N      + NE  L   L SL +G +SLDE ++KFK I DKL  L KPL D+ KVF +++GL  KYK   +Y
Subjt:  VWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKENISY

A0A2K3JSC9 Uncharacterized protein (Fragment)6.7e-0943.21Show/hide
Query:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G +    +WS++N     N   NE  L   L  L +G +SL+E ++KFK ICDKL  + KPL D+ KVF +++GL  KYKE
Subjt:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

A0A2Z6P7T0 Reverse transcriptase Ty1/copia-type domain-containing protein4.4e-0841.98Show/hide
Query:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G +    +WSS++     N    E  L   L +L +GN+SLDE ++KFK +CDKL  + KP+ D+ KVF +++GL  KYKE
Subjt:  GDENGTKVWSSVN-----NDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

A0A438IRW2 Putative mitochondrial protein2.8e-0740.24Show/hide
Query:  NGDENGTKVWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        +G E   +VW+S+  +     +  E+ L  +LL LK+G  SL+E +++FK ICD L  ++KP+ D+ KVF LA+GL  KY +
Subjt:  NGDENGTKVWSSVNND-----RGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

A0A6J1DMG5 uncharacterized protein LOC1110213791.3e-1555.56Show/hide
Query:  GDENGTKVWSSVNN-----DRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE
        G E   +VW S+        + NEIHLNE LL+LK+G++S+DE ++KFK +CD+L  +KKPLDD+TKVFHLARGL +KYK+
Subjt:  GDENGTKVWSSVNN-----DRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTGGGTTGGCCCAACAGCTTCAAAAGCTACAACACCATATGTGGTGGAGATGTTGCTAGTACTTCATGTGAATTGCCAATGAGGTTGAGTCCTATTCAGGATCA
ACTGAACCCTAATCCTCCTAGAGTTTACATTCGTCGAATCCTTATGCACTCAGGAGATCACAGAGTGGGCCTCACGTTGTACTATTCAGGGCCGAGACCAAGTCAACTCG
GACTGGGCTTGCACGGGGGTCCGGATTCGTTGGAGAGGACTATGAACCTTGAAGATCATTTGGAGAAAGAAAAGGCAACGAATGGAGATGAAAATGGAACCAAGGTATGG
TCTTCCGTTAACAATGACCGAGGAAATGAAATTCATCTCAATGAAGAACTACTAAGTTTGAAAAGGGGAAATATGTCGTTAGATGAAGATATGAAGAAGTTCAAACGTAT
TTGTGATAAGTTGGTGATCTTGAAGAAACCTCTAGATGATATCACAAAAGTTTTTCATCTGGCCAGAGGATTGGAAGTTAAATACAAAGAAAATATCTCGTACAGCAATG
ATCACAAAGCCACCTTATCCCACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTGGGTTGGCCCAACAGCTTCAAAAGCTACAACACCATATGTGGTGGAGATGTTGCTAGTACTTCATGTGAATTGCCAATGAGGTTGAGTCCTATTCAGGATCA
ACTGAACCCTAATCCTCCTAGAGTTTACATTCGTCGAATCCTTATGCACTCAGGAGATCACAGAGTGGGCCTCACGTTGTACTATTCAGGGCCGAGACCAAGTCAACTCG
GACTGGGCTTGCACGGGGGTCCGGATTCGTTGGAGAGGACTATGAACCTTGAAGATCATTTGGAGAAAGAAAAGGCAACGAATGGAGATGAAAATGGAACCAAGGTATGG
TCTTCCGTTAACAATGACCGAGGAAATGAAATTCATCTCAATGAAGAACTACTAAGTTTGAAAAGGGGAAATATGTCGTTAGATGAAGATATGAAGAAGTTCAAACGTAT
TTGTGATAAGTTGGTGATCTTGAAGAAACCTCTAGATGATATCACAAAAGTTTTTCATCTGGCCAGAGGATTGGAAGTTAAATACAAAGAAAATATCTCGTACAGCAATG
ATCACAAAGCCACCTTATCCCACCTATAA
Protein sequenceShow/hide protein sequence
MVVGWPNSFKSYNTICGGDVASTSCELPMRLSPIQDQLNPNPPRVYIRRILMHSGDHRVGLTLYYSGPRPSQLGLGLHGGPDSLERTMNLEDHLEKEKATNGDENGTKVW
SSVNNDRGNEIHLNEELLSLKRGNMSLDEDMKKFKRICDKLVILKKPLDDITKVFHLARGLEVKYKENISYSNDHKATLSHL