; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g14370 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g14370
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRNase H domain-containing protein
Genome locationchr6:11274543..11275725
RNA-Seq ExpressionMoc06g14370
SyntenyMoc06g14370
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141796.1 uncharacterized protein LOC111012081 [Momordica charantia]2.2e-3437.44Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  +L +   ALK  C+  +   +  G+  +  FT+ ++  P+PPK K   +KPYDGS DP D++E++EGLM+  A  D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +  L      +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQR
        +Q+
Subjt:  IQR

XP_022151609.1 uncharacterized protein LOC111019523 [Momordica charantia]1.5e-6276.25Show/hide
Query:  MAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQ
        MAYPLPPKMKK DMKPYD   +PIDHIELYEGLMELSA GD+MKCRAFSVTLK +ARSWYRQLK K+I  W QLRKVFI+Q SAQHDRK  +THLLTI+Q
Subjt:  MAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQ

Query:  SEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA
         E ESL +FVGRF+ EKIKVLDCS+D ARMTF S IN P+L+ S+A+QP RTY+EAIQRA
Subjt:  SEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA

XP_022152033.1 uncharacterized protein LOC111019842 [Momordica charantia]2.2e-3437.75Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  KL +   ALK  C+  +   +  G+  +  FT+ ++  P+P K K   +KPYDGS DP D++E++EGLM+  AA D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +         +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQRA
        +Q+A
Subjt:  IQRA

XP_022156542.1 uncharacterized protein LOC111023421 [Momordica charantia]2.6e-3538.24Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  +L +   ALK  C+  D   +  G+  +  FT+ ++  P+PPK K   +KPYDG+ DP D++E++EGLM+  AA D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +  L      +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQRA
        +Q+A
Subjt:  IQRA

XP_022159250.1 uncharacterized protein LOC111025663 [Momordica charantia]2.8e-3743.65Show/hide
Query:  NKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLK
        +K      ALK  C+  +  + + G+  +  FT+ I+  P+PPK K   MKPYDGS DP D++E++EGLM+  AA D +KCRAF + L   AR WYR+L 
Subjt:  NKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLK

Query:  LKTIGSWKQLRKVFISQLSAQH-DRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA
         ++I ++ QLRK FISQ S++H DRKT  THL TI Q E E+LR++V RF+ E++KV  CSDD+A   F + + + +L      +   T++E +Q+A
Subjt:  LKTIGSWKQLRKVFISQLSAQH-DRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA

TrEMBL top hitse value%identityAlignment
A0A6J1CKB3 uncharacterized protein LOC1110120811.1e-3437.44Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  +L +   ALK  C+  +   +  G+  +  FT+ ++  P+PPK K   +KPYDGS DP D++E++EGLM+  A  D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +  L      +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQR
        +Q+
Subjt:  IQR

A0A6J1DDJ7 uncharacterized protein LOC1110195237.1e-6376.25Show/hide
Query:  MAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQ
        MAYPLPPKMKK DMKPYD   +PIDHIELYEGLMELSA GD+MKCRAFSVTLK +ARSWYRQLK K+I  W QLRKVFI+Q SAQHDRK  +THLLTI+Q
Subjt:  MAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQ

Query:  SEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA
         E ESL +FVGRF+ EKIKVLDCS+D ARMTF S IN P+L+ S+A+QP RTY+EAIQRA
Subjt:  SEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA

A0A6J1DDS5 uncharacterized protein LOC1110198421.1e-3437.75Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  KL +   ALK  C+  +   +  G+  +  FT+ ++  P+P K K   +KPYDGS DP D++E++EGLM+  AA D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +         +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQRA
        +Q+A
Subjt:  IQRA

A0A6J1DS95 uncharacterized protein LOC1110234211.3e-3538.24Show/hide
Query:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA
        ++   ++  +L +   ALK  C+  D   +  G+  +  FT+ ++  P+PPK K   +KPYDG+ DP D++E++EGLM+  AA D +KCRAF + L   A
Subjt:  QDSMKEVINKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQA

Query:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA
        R WYR+L  ++I ++ QLR+ F++Q S++H  K   THL TI Q E E+LR++V RF  E++KV  CSDD+A   F + + +  L      +   T++E 
Subjt:  RSWYRQLKLKTIGSWKQLRKVFISQLSAQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEA

Query:  IQRA
        +Q+A
Subjt:  IQRA

A0A6J1DY58 uncharacterized protein LOC1110256631.4e-3743.65Show/hide
Query:  NKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLK
        +K      ALK  C+  +  + + G+  +  FT+ I+  P+PPK K   MKPYDGS DP D++E++EGLM+  AA D +KCRAF + L   AR WYR+L 
Subjt:  NKLQSDFNALKQSCKTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLK

Query:  LKTIGSWKQLRKVFISQLSAQH-DRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA
         ++I ++ QLRK FISQ S++H DRKT  THL TI Q E E+LR++V RF+ E++KV  CSDD+A   F + + + +L      +   T++E +Q+A
Subjt:  LKTIGSWKQLRKVFISQLSAQH-DRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCAAGAGTTAACGGAACTGCGTGCGGAGCTCAATGAGGAGGAAGACGTTCCACCACGGGTGCCAGTTCGCGAGCGCCTCAATTTAGGAGTAAGACGAACT
GCTACAATCGACCCAAGAGAAGGTTTGGCGTGCACGTTACGCTACCGGGGGGGAGGGGTCAACTCAAATACAATTCAATGGCCGCCTACCGCAATGACCGCCACC
ACTTTGACATACCAGGCCACGGTCGATATACCGGAAGTGCAGGATTCCATGAAGGAAGTAATCAACAAGCTTCAAAGTGATTTTAATGCTTTAAAACAAAGTTGC
AAGACGGATGATGCTCATTGGGTAGAGTTAGGCGAACGGGAAGATCCCTCATTCACCGCCCCTATAATGGCATATCCACTTCCACCAAAAATGAAAAAGCTAGAT
ATGAAGCCATATGACGGATCAACTGATCCAATCGACCACATCGAGCTATACGAGGGTTTGATGGAACTAAGTGCAGCAGGGGATGAAATGAAGTGTAGGGCTTTC
TCTGTTACCTTGAAGTGCCAAGCCCGGTCCTGGTACAGACAGTTAAAACTCAAGACCATCGGGTCCTGGAAGCAATTGAGAAAGGTTTTTATAAGCCAATTATCT
GCCCAACACGACAGGAAAACGCCCAACACCCATCTCCTTACCATTTATCAATCGGAGGACGAGTCGCTACGTGATTTCGTTGGGAGATTTATGGCAGAGAAAATT
AAGGTCCTCGACTGCTCAGATGATGCAGCCAGAATGACTTTCACATCAGCTATAAATAATCCTGACCTGGTCCATTCTTTTGCCATCCAACCAGCTCGGACTTAC
AGCGAAGCAATTCAACGAGCATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCAAGAGTTAACGGAACTGCGTGCGGAGCTCAATGAGGAGGAAGACGTTCCACCACGGGTGCCAGTTCGCGAGCGCCTCAATTTAGGAGTAAGACGAACT
GCTACAATCGACCCAAGAGAAGGTTTGGCGTGCACGTTACGCTACCGGGGGGGAGGGGTCAACTCAAATACAATTCAATGGCCGCCTACCGCAATGACCGCCACC
ACTTTGACATACCAGGCCACGGTCGATATACCGGAAGTGCAGGATTCCATGAAGGAAGTAATCAACAAGCTTCAAAGTGATTTTAATGCTTTAAAACAAAGTTGC
AAGACGGATGATGCTCATTGGGTAGAGTTAGGCGAACGGGAAGATCCCTCATTCACCGCCCCTATAATGGCATATCCACTTCCACCAAAAATGAAAAAGCTAGAT
ATGAAGCCATATGACGGATCAACTGATCCAATCGACCACATCGAGCTATACGAGGGTTTGATGGAACTAAGTGCAGCAGGGGATGAAATGAAGTGTAGGGCTTTC
TCTGTTACCTTGAAGTGCCAAGCCCGGTCCTGGTACAGACAGTTAAAACTCAAGACCATCGGGTCCTGGAAGCAATTGAGAAAGGTTTTTATAAGCCAATTATCT
GCCCAACACGACAGGAAAACGCCCAACACCCATCTCCTTACCATTTATCAATCGGAGGACGAGTCGCTACGTGATTTCGTTGGGAGATTTATGGCAGAGAAAATT
AAGGTCCTCGACTGCTCAGATGATGCAGCCAGAATGACTTTCACATCAGCTATAAATAATCCTGACCTGGTCCATTCTTTTGCCATCCAACCAGCTCGGACTTAC
AGCGAAGCAATTCAACGAGCATGTTAG
Protein sequenceShow/hide protein sequence
MGQELTELRAELNEEEDVPPRVPVRERLNLGVRRTATIDPREGLACTLRYRGGGVNSNTIQWPPTAMTATTLTYQATVDIPEVQDSMKEVINKLQSDFNALKQSC
KTDDAHWVELGEREDPSFTAPIMAYPLPPKMKKLDMKPYDGSTDPIDHIELYEGLMELSAAGDEMKCRAFSVTLKCQARSWYRQLKLKTIGSWKQLRKVFISQLS
AQHDRKTPNTHLLTIYQSEDESLRDFVGRFMAEKIKVLDCSDDAARMTFTSAINNPDLVHSFAIQPARTYSEAIQRAC