; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc06g14570 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g14570
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:11427936..11428361
RNA-Seq ExpressionMoc06g14570
SyntenyMoc06g14570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR45251.1 hypothetical protein CICLE_v10003098mg [Citrus clementina]1.8e-1555.91Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT
        S +K ++EKF  RINF LWQVQVKDVLIQ GLH ALKG+    +             +SGS K  KELWEKLE LY+ K ISNR+YLK +F T
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT

KAF7802225.1 cytochrome p450 [Senna tora]2.3e-1550.88Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLS---DDGGLVEFS-------------------SGSSKFKELWEKLEALYQAK
        S++K DVEKF  RINF LWQVQVKDVLIQ GLH AL+G+     SEK      DG   E                      G S  KELW+KLE LYQAK
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLS---DDGGLVEFS-------------------SGSSKFKELWEKLEALYQAK

Query:  GISNRMYLKGQFRT
        GISN + LK QF T
Subjt:  GISNRMYLKGQFRT

KAF7810708.1 cytochrome p450 [Senna tora]8.9e-1550Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLS---DDGGLVEFS-------------------SGSSKFKELWEKLEALYQAK
        S++K DVEKF  RINF  WQVQVKDVLIQ GL  AL+G+     SEK      DG   E                      G S  KELW+KLE LYQAK
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLS---DDGGLVEFS-------------------SGSSKFKELWEKLEALYQAK

Query:  GISNRMYLKGQFRT
        GISNR+ LK QF T
Subjt:  GISNRMYLKGQFRT

KAG7577502.1 F-box associated domain type 1 [Arabidopsis thaliana x Arabidopsis arenosa]4.0e-1544.35Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDG-----------------------GLVEFSSGSSKFKELWEKLEALYQA
        + +K+++EKF  RINF LWQVQVKD+LIQ+GLH ALKG+       +    G                        ++    G S  KELWEKLE LYQA
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDG-----------------------GLVEFSSGSSKFKELWEKLEALYQA

Query:  KGISNRMYLKGQFRT
        KG+SNR+YLK +F T
Subjt:  KGISNRMYLKGQFRT

XP_022139673.1 uncharacterized protein LOC111010521 [Momordica charantia]1.2e-2252.59Show/hide
Query:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK------------------------------------
        MS +KIDVEKF   INF LWQVQVKDVLIQ  LH ALKGR  + ASEKLSDDGG +E S GSS+                                    
Subjt:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK------------------------------------

Query:  ----FKELWEKLEALYQAKGISNRMYLKGQFRTYE
             KELWEKLEALYQAKGISNR+YLK QF T +
Subjt:  ----FKELWEKLEALYQAKGISNRMYLKGQFRTYE

TrEMBL top hitse value%identityAlignment
A0A2H5QXN2 Uncharacterized protein8.7e-1655.91Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT
        S +K ++EKF  RINF LWQVQVKDVLIQ GLH ALKG+    +             +SGS K  KELWEKLE LY+ K ISNR+YLK +F T
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT

A0A2P5FY52 Uncharacterized protein (Fragment)3.7e-1447.22Show/hide
Query:  LKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDG------------------GLVEFSSGSSKFKELWEKLEALYQAKGISNRM
        +K DVEKF   INF LW VQV+D+LIQ GLHN LKGR       K+SD+                    ++    G S  K+LWEKL  LY+AKG+SNR+
Subjt:  LKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDG------------------GLVEFSSGSSKFKELWEKLEALYQAKGISNRM

Query:  YLKGQFRT
        YLK QF T
Subjt:  YLKGQFRT

A0A444X3K2 Uncharacterized protein3.7e-1448.54Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASE-------------KLSDDGGLVEFSSGSSKFKELWEKLEALYQAKGISNRMYLK
        S++K+++EKF  RINF LWQ+QVKDVLIQ GLH ALK +      E             +L     ++    G    KELW+KLE LYQAKGISNR+ LK
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASE-------------KLSDDGGLVEFSSGSSKFKELWEKLEALYQAKGISNRMYLK

Query:  GQF
         QF
Subjt:  GQF

A0A6J1CG82 uncharacterized protein LOC1110105215.6e-2352.59Show/hide
Query:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK------------------------------------
        MS +KIDVEKF   INF LWQVQVKDVLIQ  LH ALKGR  + ASEKLSDDGG +E S GSS+                                    
Subjt:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK------------------------------------

Query:  ----FKELWEKLEALYQAKGISNRMYLKGQFRTYE
             KELWEKLEALYQAKGISNR+YLK QF T +
Subjt:  ----FKELWEKLEALYQAKGISNRMYLKGQFRTYE

V4T6T3 Uncharacterized protein8.7e-1655.91Show/hide
Query:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT
        S +K ++EKF  RINF LWQVQVKDVLIQ GLH ALKG+    +             +SGS K  KELWEKLE LY+ K ISNR+YLK +F T
Subjt:  SSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSK-FKELWEKLEALYQAKGISNRMYLKGQFRT

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-0631.13Show/hide
Query:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSKF----------------KELWEKLEALYQAKGISNR
        MS +K +V KF     F  WQ +++D+LIQ GLH  L   S    + K  D   L E ++ + +                 + +W +LE+LY +K ++N+
Subjt:  MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSKF----------------KELWEKLEALYQAKGISNR

Query:  MYLKGQ
        +YLK Q
Subjt:  MYLKGQ

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCATTGAAGATTGACGTGGAGAAATTTTGTCAAAGGATCAACTTCGACTTGTGGCAAGTTCAAGTCAAGGACGTGCTTATACAATATGGATTACACAATGCATT
GAAAGGAAGATCGATTGATTGTGCTTCTGAAAAACTAAGCGATGATGGTGGTTTAGTGGAGTTCAGTAGTGGTTCCAGCAAATTCAAAGAACTTTGGGAGAAGCTTGAAG
CGTTGTATCAGGCAAAGGGCATCTCAAATCGGATGTACCTGAAGGGGCAGTTTCGCACTTACGAAAATTTCAGATCATTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCATTGAAGATTGACGTGGAGAAATTTTGTCAAAGGATCAACTTCGACTTGTGGCAAGTTCAAGTCAAGGACGTGCTTATACAATATGGATTACACAATGCATT
GAAAGGAAGATCGATTGATTGTGCTTCTGAAAAACTAAGCGATGATGGTGGTTTAGTGGAGTTCAGTAGTGGTTCCAGCAAATTCAAAGAACTTTGGGAGAAGCTTGAAG
CGTTGTATCAGGCAAAGGGCATCTCAAATCGGATGTACCTGAAGGGGCAGTTTCGCACTTACGAAAATTTCAGATCATTTGAGTAA
Protein sequenceShow/hide protein sequence
MSSLKIDVEKFCQRINFDLWQVQVKDVLIQYGLHNALKGRSIDCASEKLSDDGGLVEFSSGSSKFKELWEKLEALYQAKGISNRMYLKGQFRTYENFRSFE