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Moc06g14670 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g14670
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr6:11553070..11554037
RNA-Seq ExpressionMoc06g14670
SyntenyMoc06g14670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157694.1 uncharacterized protein LOC111024352 [Momordica charantia]4.4e-2939.55Show/hide
Query:  KQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQNEVMNVWSKFKHDTMELILDNDDPPSSNVMN--------
        +Q   L +FSLE+TMI+FMAR D +I  LQI++E   DELRNSP      ++E      EQ E  N  S+ + D +EL +DNDDPP   V+N        
Subjt:  KQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQNEVMNVWSKFKHDTMELILDNDDPPSSNVMN--------

Query:  --------------------------------------------------EDKIEEEIGEDEVGSDEEFYSEAATKIPLLKNKFIQVSHLPLELDLQAYC
                                                          ED++  E+GED +GSDE FY + +++IP+ KN+ IQVSHLPLELDL+AYC
Subjt:  --------------------------------------------------EDKIEEEIGEDEVGSDEEFYSEAATKIPLLKNKFIQVSHLPLELDLQAYC

Query:  ALKKRNCDMAAEEERSNELD
        ALK+RN DM   EERSN L+
Subjt:  ALKKRNCDMAAEEERSNELD

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]1.7e-1235.03Show/hide
Query:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPY---EHAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSLE
        C YCGD  H+FE+ P NP S+    +   +   +PYSNSY+  W+ H NF WG Q   SS      + +FPP F  QP+ +        Q Q     SLE
Subjt:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPY---EHAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSLE

Query:  ETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN
          M ++MA+NDA I        NL++++ Q  ++L+N P  T  +D E  +++G+++
Subjt:  ETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN

XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]9.8e-1335.67Show/hide
Query:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPY---EHAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSLE
        C YCGD  H+FE+ P NP S+    +   +   +PYSNSY+  W+ H NF WG Q   SS      + +FPP F  QP     +P    Q Q     SLE
Subjt:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPY---EHAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSLE

Query:  ETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN
          M ++MA+NDA I        NL++++ Q  + L+N P  T  +D E  +++G+++
Subjt:  ETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]4.9e-1234.81Show/hide
Query:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPYE----HAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSL
        C YCGD   +FE++P NP S+    +   +   +PYSNSY+  W+ H NF WG Q   SS   +     +FPP F  QP+ +  QP+   Q Q     SL
Subjt:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPYE----HAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSL

Query:  EETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN
        E  M ++MA+NDA I        NL++++ Q  ++L+N P  T  +D +  +++G+++
Subjt:  EETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]7.5e-1335.44Show/hide
Query:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPYE----HAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSL
        C YCGD  H+FE+ P NP S+    +   +   +PYSNSY+  W+ H NF WG Q   SS   +     +FPP F  QP     +P    Q Q     SL
Subjt:  CSYCGDSCHSFEHYPCNPTSL--FKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPYE----HAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSL

Query:  EETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN
        E  M ++MA+NDA I        NL++++ Q  ++L+N P  T  +D E  +++G+++
Subjt:  EETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN

TrEMBL top hitse value%identityAlignment
A0A6J1DXA5 uncharacterized protein LOC1110243522.1e-2939.55Show/hide
Query:  KQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQNEVMNVWSKFKHDTMELILDNDDPPSSNVMN--------
        +Q   L +FSLE+TMI+FMAR D +I  LQI++E   DELRNSP      ++E      EQ E  N  S+ + D +EL +DNDDPP   V+N        
Subjt:  KQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQNEVMNVWSKFKHDTMELILDNDDPPSSNVMN--------

Query:  --------------------------------------------------EDKIEEEIGEDEVGSDEEFYSEAATKIPLLKNKFIQVSHLPLELDLQAYC
                                                          ED++  E+GED +GSDE FY + +++IP+ KN+ IQVSHLPLELDL+AYC
Subjt:  --------------------------------------------------EDKIEEEIGEDEVGSDEEFYSEAATKIPLLKNKFIQVSHLPLELDLQAYC

Query:  ALKKRNCDMAAEEERSNELD
        ALK+RN DM   EERSN L+
Subjt:  ALKKRNCDMAAEEERSNELD

A0A6J1DZ19 uncharacterized protein LOC1110248241.6e-0829.65Show/hide
Query:  SFIAPVNQFFCSYCGDSCHSFEHYPCNPTSLF-KSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESS------YPYEHAF-PPEFPTQP---QHEYDQ
        S    ++   C YCGD+   +E+ P NPTS+F          +PYSN+Y   WR+H NF W  Q + SS        Y+  + PP+FPTQP     +Y+Q
Subjt:  SFIAPVNQFFCSYCGDSCHSFEHYPCNPTSLF-KSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESS------YPYEHAF-PPEFPTQP---QHEYDQ

Query:  P------------WDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISK
                       L+ ++   +   E T   FM R D  I  L++++ Q  ++ ++ P  T   + E  K
Subjt:  P------------WDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISK

A0A6J1EEI2 uncharacterized protein LOC1114333946.7e-0730.72Show/hide
Query:  IAPVNQF---FCSYCGDSCHSFEHYPCNPTSLF----KSTGESTTVHPYSNSYHQDWRDHSNFLW-GEQQLESSYPYEHAFPPEFPTQPQHEYD------
        +A +NQ     C YCG+  H+F+  P NP S+F    +++  +   +P+SN+Y+  WR+H NF W G+       P +  +PP F  Q Q  Y       
Subjt:  IAPVNQF---FCSYCGDSCHSFEHYPCNPTSLF----KSTGESTTVHPYSNSYHQDWRDHSNFLW-GEQQLESSYPYEHAFPPEFPTQPQHEYD------

Query:  QPWDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQ
        Q   + Q Q  +  S+E  +  +MA+ND  I N Q         LRN    T ++  E +K   +Q
Subjt:  QPWDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQ

A0A6J1G7Q6 uncharacterized protein LOC1114515987.6e-1134.38Show/hide
Query:  CSYCGDSCHSFEHYPCNPTSLF----KSTGESTTVHPYSNSYHQDWRDHSNFLW-GEQQLESSYPYEHAFPPEFPTQPQHEYD------QPWDLKQVQSL
        C YCG+  H+F+  P NP S+F    +++  +   +P SN+Y+  WR+H NFL  G+       P +  +PP F  Q Q  YD      Q     Q Q +
Subjt:  CSYCGDSCHSFEHYPCNPTSLF----KSTGESTTVHPYSNSYHQDWRDHSNFLW-GEQQLESSYPYEHAFPPEFPTQPQHEYD------QPWDLKQVQSL

Query:  VIFSLEETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEG
            LE  +  +MARNDA I        NL++++ Q  +ELRN P      D E+ K+EG
Subjt:  VIFSLEETMINFMARNDAAI-------CNLQIRIEQFTDELRNSPPTTCRNDVEISKQEG

A0A6P4MBX5 uncharacterized protein LOC1084556645.1e-0731.52Show/hide
Query:  GSSSFIA-PVNQF---FCSYCGDSCHSFEHYPCNPTSLFKSTGESTT---VHPYSNSYHQDWRDHSNFLWGEQQLESSYPYEHAFPPEFPTQPQHEYDQP
        GS+SF+A P NQ+    C Y G+  H FE  P NP+S+     ++         SN Y+  WR+H N  W  Q    S  Y    P + P+  Q      
Subjt:  GSSSFIA-PVNQF---FCSYCGDSCHSFEHYPCNPTSLFKSTGESTT---VHPYSNSYHQDWRDHSNFLWGEQQLESSYPYEHAFPPEFPTQPQHEYDQP

Query:  WDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN
           K VQ+    SLE  +  +M +NDA + NL+ ++ Q   ELRN P     +D++  +  G+++
Subjt:  WDLKQVQSLVIFSLEETMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTAGCTCGTTCATTGCTCCTGTTAATCAATTTTTTTGTTCATATTGTGGTGATAGCTGCCATTCATTTGAACATTACCCATGTAATCCTACATCCTTATTCAA
ATCCACTGGGGAATCAACAACAGTTCATCCTTATTCAAATTCCTACCACCAAGATTGGAGGGATCATTCGAATTTCTTGTGGGGAGAGCAACAACTTGAAAGTAGCTATC
CATATGAGCATGCATTCCCACCAGAATTCCCGACACAGCCTCAGCATGAGTACGATCAACCATGGGATCTAAAGCAAGTACAATCGTTGGTAATTTTTAGCCTTGAAGAG
ACGATGATAAATTTTATGGCGAGAAATGATGCAGCAATATGCAACCTGCAAATCCGAATAGAGCAATTCACTGATGAGTTGAGGAATAGTCCACCAACAACTTGTCGTAA
CGATGTGGAGATCTCAAAGCAAGAAGGGGAGCAAAATGAGGTAATGAACGTATGGAGCAAGTTCAAACATGACACAATGGAGCTCATACTGGACAACGATGACCCACCAT
CCTCTAATGTGATGAACGAGGATAAAATAGAGGAAGAAATAGGAGAAGATGAGGTAGGTTCAGATGAAGAATTTTATTCAGAAGCAGCAACCAAAATTCCACTTTTAAAA
AACAAATTCATACAAGTAAGTCATCTCCCTCTCGAGCTGGACCTTCAAGCATATTGTGCTTTGAAGAAGAGAAACTGCGACATGGCAGCAGAAGAAGAGAGGTCGAATGA
GCTTGATTTGAGGGGCACTCTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTAGCTCGTTCATTGCTCCTGTTAATCAATTTTTTTGTTCATATTGTGGTGATAGCTGCCATTCATTTGAACATTACCCATGTAATCCTACATCCTTATTCAA
ATCCACTGGGGAATCAACAACAGTTCATCCTTATTCAAATTCCTACCACCAAGATTGGAGGGATCATTCGAATTTCTTGTGGGGAGAGCAACAACTTGAAAGTAGCTATC
CATATGAGCATGCATTCCCACCAGAATTCCCGACACAGCCTCAGCATGAGTACGATCAACCATGGGATCTAAAGCAAGTACAATCGTTGGTAATTTTTAGCCTTGAAGAG
ACGATGATAAATTTTATGGCGAGAAATGATGCAGCAATATGCAACCTGCAAATCCGAATAGAGCAATTCACTGATGAGTTGAGGAATAGTCCACCAACAACTTGTCGTAA
CGATGTGGAGATCTCAAAGCAAGAAGGGGAGCAAAATGAGGTAATGAACGTATGGAGCAAGTTCAAACATGACACAATGGAGCTCATACTGGACAACGATGACCCACCAT
CCTCTAATGTGATGAACGAGGATAAAATAGAGGAAGAAATAGGAGAAGATGAGGTAGGTTCAGATGAAGAATTTTATTCAGAAGCAGCAACCAAAATTCCACTTTTAAAA
AACAAATTCATACAAGTAAGTCATCTCCCTCTCGAGCTGGACCTTCAAGCATATTGTGCTTTGAAGAAGAGAAACTGCGACATGGCAGCAGAAGAAGAGAGGTCGAATGA
GCTTGATTTGAGGGGCACTCTTTTGTGA
Protein sequenceShow/hide protein sequence
MGSSSFIAPVNQFFCSYCGDSCHSFEHYPCNPTSLFKSTGESTTVHPYSNSYHQDWRDHSNFLWGEQQLESSYPYEHAFPPEFPTQPQHEYDQPWDLKQVQSLVIFSLEE
TMINFMARNDAAICNLQIRIEQFTDELRNSPPTTCRNDVEISKQEGEQNEVMNVWSKFKHDTMELILDNDDPPSSNVMNEDKIEEEIGEDEVGSDEEFYSEAATKIPLLK
NKFIQVSHLPLELDLQAYCALKKRNCDMAAEEERSNELDLRGTLL