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Moc06g15080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g15080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr6:11780421..11784198
RNA-Seq ExpressionMoc06g15080
SyntenyMoc06g15080
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032572.1 putative retroelement [Cucumis melo var. makuwa]5.4e-2456.73Show/hide
Query:  KGKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFR
        K KSPFE+VY KLPRLT++LANIPS VD  ++AE MAER+ KLH+DV N +E+ N  YK +A   RR  EFKE DLVM++L K R  AG  ++LQ KK  
Subjt:  KGKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFR

Query:  PFEV
        P+ +
Subjt:  PFEV

KAA0054760.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.5e-2148.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        G+ PF++VYTK PRLT++L ++P+TV+   EAE+M   I KLH++V++++ +    YK  AD KRR  EF +GDLVMIHL K R P G+ ++L+ K+ RP
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F +
Subjt:  FEV

KAA0059835.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]4.0e-1948.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        GK PFEV+YTK  RLT +L ++P+TVD + +AE+M E+I  LH++V ++++E    +K  AD KRR   F +GDLVMIHL K R PA +  +L+ ++F P
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F V
Subjt:  FEV

TYJ99684.1 serine/threonine-protein kinase TIO-like [Cucumis melo var. makuwa]2.1e-2048.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        GK PF++VYTK PRLT++L ++P+TV+   EAE+M   I KLH++V++++ +    YK  AD KRR  EF +GDLVMIHL K R P G+ ++L+ K+  P
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F +
Subjt:  FEV

TYK28638.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.6e-2057.95Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAG
        GKSPFE+VYT LP++T +LAN+PS +D S+EAE MAERI+KLHQ+V +++E AN  YK  A+S +R  E++ GDLVM++L K R P G
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAG

TrEMBL top hitse value%identityAlignment
A0A5A7SNF3 Putative retroelement2.6e-2456.73Show/hide
Query:  KGKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFR
        K KSPFE+VY KLPRLT++LANIPS VD  ++AE MAER+ KLH+DV N +E+ N  YK +A   RR  EFKE DLVM++L K R  AG  ++LQ KK  
Subjt:  KGKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFR

Query:  PFEV
        P+ +
Subjt:  PFEV

A0A5A7UHK1 DNA/RNA polymerases superfamily protein4.6e-2148.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        G+ PF++VYTK PRLT++L ++P+TV+   EAE+M   I KLH++V++++ +    YK  AD KRR  EF +GDLVMIHL K R P G+ ++L+ K+ RP
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F +
Subjt:  FEV

A0A5A7V1T8 Transposon Ty3-G Gag-Pol polyprotein1.9e-1948.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        GK PFEV+YTK  RLT +L ++P+TVD + +AE+M E+I  LH++V ++++E    +K  AD KRR   F +GDLVMIHL K R PA +  +L+ ++F P
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F V
Subjt:  FEV

A0A5D3BKX9 Serine/threonine-protein kinase TIO-like1.0e-2048.54Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP
        GK PF++VYTK PRLT++L ++P+TV+   EAE+M   I KLH++V++++ +    YK  AD KRR  EF +GDLVMIHL K R P G+ ++L+ K+  P
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRP

Query:  FEV
        F +
Subjt:  FEV

A0A5D3DYV8 DNA/RNA polymerases superfamily protein1.8e-2057.95Show/hide
Query:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAG
        GKSPFE+VYT LP++T +LAN+PS +D S+EAE MAERI+KLHQ+V +++E AN  YK  A+S +R  E++ GDLVM++L K R P G
Subjt:  GKSPFEVVYTKLPRLTVNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGGGTTACTTCTTCGGGTTCCAAGAACAAAGGTGGTGCTGACGCTCTACCAGCAGAACAACCAGTTAAAAGACCAACAAATACATATACTAGACCTACTATGGG
TAAATACTTTCAGTGCGGGCAGTCCGATAATGACATTACCTATGTTGAACCCGATCAAGGTGAACAGGCTCTACACAAAGGCAGCGAAAACACCTACGAATTTTCGTGGA
TGGGGAAAACCGTTGTTCTATTACCTTTACAGAGTCAACAAGAGGCAACAACTGCGGCTAAAGGGAAGTCTCCCTTTGAAGTTGTTTATACAAAACTTCCTCGTTTAACT
GTAAACTTGGCTAATATTCCTTCTACTGTTGATTTTAGCCTAGAAGCAGAGCAAATGGCAGAAAGGATAACCAAATTACATCAAGATGTCTTCAATTACATCGAGGAAGC
TAATGCCAAATATAAAGCAAAGGCAGACAGCAAAAGAAGGGCAACTGAATTTAAAGAAGGCGATCTTGTTATGATACACTTATCAAAAGGAAGATTACCAGCGGGGTCTA
TCCATGAGCTACAACAGAAGAAGTTTAGACCCTTTGAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGGGTTACTTCTTCGGGTTCCAAGAACAAAGGTGGTGCTGACGCTCTACCAGCAGAACAACCAGTTAAAAGACCAACAAATACATATACTAGACCTACTATGGG
TAAATACTTTCAGTGCGGGCAGTCCGATAATGACATTACCTATGTTGAACCCGATCAAGGTGAACAGGCTCTACACAAAGGCAGCGAAAACACCTACGAATTTTCGTGGA
TGGGGAAAACCGTTGTTCTATTACCTTTACAGAGTCAACAAGAGGCAACAACTGCGGCTAAAGGGAAGTCTCCCTTTGAAGTTGTTTATACAAAACTTCCTCGTTTAACT
GTAAACTTGGCTAATATTCCTTCTACTGTTGATTTTAGCCTAGAAGCAGAGCAAATGGCAGAAAGGATAACCAAATTACATCAAGATGTCTTCAATTACATCGAGGAAGC
TAATGCCAAATATAAAGCAAAGGCAGACAGCAAAAGAAGGGCAACTGAATTTAAAGAAGGCGATCTTGTTATGATACACTTATCAAAAGGAAGATTACCAGCGGGGTCTA
TCCATGAGCTACAACAGAAGAAGTTTAGACCCTTTGAAGTTTAA
Protein sequenceShow/hide protein sequence
MTRVTSSGSKNKGGADALPAEQPVKRPTNTYTRPTMGKYFQCGQSDNDITYVEPDQGEQALHKGSENTYEFSWMGKTVVLLPLQSQQEATTAAKGKSPFEVVYTKLPRLT
VNLANIPSTVDFSLEAEQMAERITKLHQDVFNYIEEANAKYKAKADSKRRATEFKEGDLVMIHLSKGRLPAGSIHELQQKKFRPFEV