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Moc06g15470 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc06g15470
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:12231482..12232387
RNA-Seq ExpressionMoc06g15470
SyntenyMoc06g15470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53056.1 hypothetical protein EZV62_022225 [Acer yangbiense]7.0e-0442.65Show/hide
Query:  GEESDLEFETLD----VHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPL
        G+ S L+F   D    +HN+   C+ R +A  LA  L  V E+ S+   CW G FLRV++RID+ RPL
Subjt:  GEESDLEFETLD----VHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPL
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]8.3e-0539.68Show/hide
Query:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
        + +HN+ F C++ ++A +L   L  VEE+  +    W G F+RVR++IDV +PLR G  +K S
Subjt:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.0e-0439.68Show/hide
Query:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
        + +H ++F C+T+D+A  L   L  VEEV    ++ W+  FL VR++I+V +PLR G  +K S
Subjt:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179024.0e-0539.68Show/hide
Query:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
        + +HN+ F C++ ++A +L   L  VEE+  +    W G F+RVR++IDV +PLR G  +K S
Subjt:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
A0A6J1DVS4 uncharacterized protein LOC1110235553.4e-0439.68Show/hide
Query:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
        + +H ++F C+T+D+A  L   L  VEEV    ++ W+  FL VR++I+V +PLR G  +K S
Subjt:  LDVHNVSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACGAACTAAGAGTGGGGGCAAGTGTTATGGGAAAATCAAGTCAAGCCCAACAAGCTACAAAATACCCAAATCAGGCCCGAAATGGAAAGGCCAAGATG
GAGAAACTCAACAGGACAACGAAGGCCCGACACATGGAGGGTCGTAATCCAGATTGGTCAAAGCTGACAAGTTCTCGACCACCAACTGAGAATTCTGATGAAGCC
CTCCGACATCCTTACGAAGGTGGGCTCAAACCTGTTCCACCTTGTTTCGTTCGTATTTTTGGAGAAGAATCAGATCTTGAATTCGAAACCCTAGACGTGCACAAT
GTTTCGTTTAATTGTCTGACCCGAGACGTGGCTCTACTGCTAGCTGGCACTCTTCGTTTGGTCGAGGAAGTGTTTAGCGAGGATACCTTTTGTTGGATTGGTTCA
TTCTTGCGTGTTCGTATTCGTATTGATGTTCAAAGACCCTTAAGGCTGGGGGGGGGGATGAAATTCAGTCCTCATGTTGGTATGGAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCACGAACTAAGAGTGGGGGCAAGTGTTATGGGAAAATCAAGTCAAGCCCAACAAGCTACAAAATACCCAAATCAGGCCCGAAATGGAAAGGCCAAGATG
GAGAAACTCAACAGGACAACGAAGGCCCGACACATGGAGGGTCGTAATCCAGATTGGTCAAAGCTGACAAGTTCTCGACCACCAACTGAGAATTCTGATGAAGCC
CTCCGACATCCTTACGAAGGTGGGCTCAAACCTGTTCCACCTTGTTTCGTTCGTATTTTTGGAGAAGAATCAGATCTTGAATTCGAAACCCTAGACGTGCACAAT
GTTTCGTTTAATTGTCTGACCCGAGACGTGGCTCTACTGCTAGCTGGCACTCTTCGTTTGGTCGAGGAAGTGTTTAGCGAGGATACCTTTTGTTGGATTGGTTCA
TTCTTGCGTGTTCGTATTCGTATTGATGTTCAAAGACCCTTAAGGCTGGGGGGGGGGATGAAATTCAGTCCTCATGTTGGTATGGAGGTGTAG
Protein sequenceShow/hide protein sequence
MNHELRVGASVMGKSSQAQQATKYPNQARNGKAKMEKLNRTTKARHMEGRNPDWSKLTSSRPPTENSDEALRHPYEGGLKPVPPCFVRIFGEESDLEFETLDVHN
VSFNCLTRDVALLLAGTLRLVEEVFSEDTFCWIGSFLRVRIRIDVQRPLRLGGGMKFSPHVGMEV